RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 BVES-AS1Q5T3Y7 98 aa11.18□□□□□ -0.62
LETMD1-220ENST00000549686 XAGE1AQ9HD64 81 aa11.18□□□□□ -0.62
LETMD1-220ENST00000549686 FAT2Q9NYQ8 4349 aa11.18□□□□□ -0.62
LETMD1-220ENST00000549686 NDUFC2O95298 119 aa11.17□□□□□ -0.62
LETMD1-220ENST00000549686 HINT1P49773 126 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-220ENST00000549686 PLA2G2DQ9UNK4 145 aa11.16□□□□□ -0.62
LETMD1-220ENST00000549686 A4D1N5 150 aa11.15□□□□□ -0.62
LETMD1-220ENST00000549686 FXYD2P54710 66 aa11.15□□□□□ -0.62
LETMD1-220ENST00000549686 KRTAP10-2P60368 255 aa11.15□□□□□ -0.62
LETMD1-220ENST00000549686 A0A096LNI7 61 aa11.14□□□□□ -0.63
LETMD1-220ENST00000549686 EIF4EBP3O60516 100 aaPredicted RBP11.14□□□□□ -0.63
LETMD1-220ENST00000549686 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
LETMD1-220ENST00000549686 A6NDN8 102 aa11.13□□□□□ -0.63
LETMD1-220ENST00000549686 DNAH11Q96DT5 4516 aa11.12□□□□□ -0.63
LETMD1-220ENST00000549686 A0A0B4J2C4 111 aa11.11□□□□□ -0.63
LETMD1-220ENST00000549686 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
LETMD1-220ENST00000549686 TRBV10-2A0A0K0K1G8 114 aa11.11□□□□□ -0.63
LETMD1-220ENST00000549686 A0A1B0GVY2 172 aa11.11□□□□□ -0.63
LETMD1-220ENST00000549686 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
LETMD1-220ENST00000549686 IGLV5-37A0A075B6J1 123 aa11.1□□□□□ -0.63
LETMD1-220ENST00000549686 A0A1B0GWB2 263 aa11.1□□□□□ -0.63
LETMD1-220ENST00000549686 VPREB1P12018 145 aa11.1□□□□□ -0.63
LETMD1-220ENST00000549686 TRAV13-2A0A0B4J235 113 aa11.09□□□□□ -0.63
LETMD1-220ENST00000549686 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
LETMD1-220ENST00000549686 BATFQ16520 125 aa11.09□□□□□ -0.63
LETMD1-220ENST00000549686 SPACA4Q8TDM5 124 aa11.09□□□□□ -0.63
LETMD1-220ENST00000549686 RAB37Q96AX2 223 aa11.09□□□□□ -0.63
LETMD1-220ENST00000549686 NHP2Q9NX24 153 aaKnown RBP11.09□□□□□ -0.63
LETMD1-220ENST00000549686 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
LETMD1-220ENST00000549686 CFC1P0CG37 223 aa11.08□□□□□ -0.64
LETMD1-220ENST00000549686 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
LETMD1-220ENST00000549686 SNHG12Q9BXW3 62 aa11.08□□□□□ -0.64
LETMD1-220ENST00000549686 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
LETMD1-220ENST00000549686 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
LETMD1-220ENST00000549686 RYR3Q15413 4870 aa11.07□□□□□ -0.64
LETMD1-220ENST00000549686 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
LETMD1-220ENST00000549686 M0R378 163 aa11.06□□□□□ -0.64
LETMD1-220ENST00000549686 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
LETMD1-220ENST00000549686 SERTAD4-AS1Q5TG53 156 aa11.06□□□□□ -0.64
LETMD1-220ENST00000549686 Q8NDZ9 215 aa11.06□□□□□ -0.64
LETMD1-220ENST00000549686 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
LETMD1-220ENST00000549686 PRO1854Q9UHT4 67 aa11.05□□□□□ -0.64
LETMD1-220ENST00000549686 CBY1Q9Y3M2 126 aa11.05□□□□□ -0.64
LETMD1-220ENST00000549686 DNAH5Q8TE73 4624 aa11.04□□□□□ -0.64
LETMD1-220ENST00000549686 NCR3O14931 201 aa11.04□□□□□ -0.64
LETMD1-220ENST00000549686 LBHQ53QV2 105 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-220ENST00000549686 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-220ENST00000549686 TMEM126AQ9H061 195 aa11.04□□□□□ -0.64
LETMD1-220ENST00000549686 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-220ENST00000549686 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
LETMD1-220ENST00000549686 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
LETMD1-220ENST00000549686 COL5A1-AS1Q5SY13 56 aa11.03□□□□□ -0.64
LETMD1-220ENST00000549686 S100A7L2Q5SY68 101 aa11.03□□□□□ -0.64
LETMD1-220ENST00000549686 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
LETMD1-220ENST00000549686 A0A1W2PNN7 141 aa11.02□□□□□ -0.65
LETMD1-220ENST00000549686 KRTAP10-1P60331 282 aa11.02□□□□□ -0.65
LETMD1-220ENST00000549686 PRR3P79522 188 aaKnown RBP11.02□□□□□ -0.65
LETMD1-220ENST00000549686 Q6ZSA8 131 aa11.02□□□□□ -0.65
LETMD1-220ENST00000549686 C22orf24Q9Y442 160 aa11.02□□□□□ -0.65
LETMD1-220ENST00000549686 PKD1P98161 4303 aa11.02□□□□□ -0.65
LETMD1-220ENST00000549686 PANO1I0J062 215 aa11.01□□□□□ -0.65
LETMD1-220ENST00000549686 K7ERJ3 54 aa11.01□□□□□ -0.65
LETMD1-220ENST00000549686 M0QXV9 152 aa11.01□□□□□ -0.65
LETMD1-220ENST00000549686 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
LETMD1-220ENST00000549686 KRTAP7-1Q8IUC3 87 aa11.01□□□□□ -0.65
LETMD1-220ENST00000549686 OR13C6PQ8NH95 151 aa11.01□□□□□ -0.65
LETMD1-220ENST00000549686 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
LETMD1-220ENST00000549686 A0A087WYN8 130 aa11□□□□□ -0.65
LETMD1-220ENST00000549686 IGLV6-57P01721 117 aa11□□□□□ -0.65
LETMD1-220ENST00000549686 RPL13AP40429 203 aaKnown RBP11□□□□□ -0.65
LETMD1-220ENST00000549686 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
LETMD1-220ENST00000549686 TRBV10-3A0A0K0K1G6 114 aa10.97□□□□□ -0.65
LETMD1-220ENST00000549686 Q1RN00 199 aa10.96□□□□□ -0.65
LETMD1-220ENST00000549686 LINC00167Q96N53 147 aa10.96□□□□□ -0.65
LETMD1-220ENST00000549686 DNAH8Q96JB1 4490 aa10.95□□□□□ -0.66
LETMD1-220ENST00000549686 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
LETMD1-220ENST00000549686 TRAV23DV6A0A075B6W5 121 aa10.94□□□□□ -0.66
LETMD1-220ENST00000549686 GAGE10A6NGK3 116 aa10.94□□□□□ -0.66
LETMD1-220ENST00000549686 H7C2G1 150 aa10.94□□□□□ -0.66
LETMD1-220ENST00000549686 KCNQ1DNQ9H478 68 aa10.94□□□□□ -0.66
LETMD1-220ENST00000549686 FAM30AQ9NZY2 134 aa10.94□□□□□ -0.66
LETMD1-220ENST00000549686 TAX1BP3O14907 124 aa10.93□□□□□ -0.66
LETMD1-220ENST00000549686 TSPAN13O95857 204 aa10.93□□□□□ -0.66
LETMD1-220ENST00000549686 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
LETMD1-220ENST00000549686 PRYO14603 147 aa10.92□□□□□ -0.66
LETMD1-220ENST00000549686 UBE2BP63146 152 aa10.92□□□□□ -0.66
LETMD1-220ENST00000549686 PHF5AQ7RTV0 110 aaKnown RBP10.92□□□□□ -0.66
LETMD1-220ENST00000549686 CIRBP-AS1Q8TBR5 109 aa10.92□□□□□ -0.66
LETMD1-220ENST00000549686 SMIM11BQ8TCY0 68 aa10.92□□□□□ -0.66
LETMD1-220ENST00000549686 C9orf118A6NHY6 69 aa10.91□□□□□ -0.66
LETMD1-220ENST00000549686 SCXQ7RTU7 201 aa10.91□□□□□ -0.66
LETMD1-220ENST00000549686 DYNC1H1Q14204 4646 aaKnown RBP10.9□□□□□ -0.66
LETMD1-220ENST00000549686 RPL37AP8A6NKH3 93 aa10.9□□□□□ -0.66
LETMD1-220ENST00000549686 COX6CP09669 75 aa10.9□□□□□ -0.66
LETMD1-220ENST00000549686 PSMB2P49721 201 aa10.9□□□□□ -0.66
LETMD1-220ENST00000549686 PKHD1P08F94 4074 aa10.9□□□□□ -0.66
LETMD1-220ENST00000549686 LRP1BQ9NZR2 4599 aa10.89□□□□□ -0.67
LETMD1-220ENST00000549686 ZNF73O43830 326 aaPredicted RBP10.89□□□□□ -0.67
LETMD1-220ENST00000549686 LYRM7Q5U5X0 104 aa10.89□□□□□ -0.67
LETMD1-220ENST00000549686 DIRC1Q969H9 104 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms