RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
SSH1-208ENST00000548522 HERVK_113P63121 156 aa10.13□□□□□ -0.79
SSH1-208ENST00000548522 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
SSH1-208ENST00000548522 TMEM101Q96IK0 257 aa10.12□□□□□ -0.79
SSH1-208ENST00000548522 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
SSH1-208ENST00000548522 TMEM238LA0A1B0GVL6 79 aa10.11□□□□□ -0.79
SSH1-208ENST00000548522 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
SSH1-208ENST00000548522 A6NJY4 79 aa10.11□□□□□ -0.79
SSH1-208ENST00000548522 PTTG1IPP53801 180 aa10.11□□□□□ -0.79
SSH1-208ENST00000548522 SYCNQ0VAF6 134 aa10.11□□□□□ -0.79
SSH1-208ENST00000548522 LINC00469Q8N7U9 141 aa10.11□□□□□ -0.79
SSH1-208ENST00000548522 C9orf118A6NHY6 69 aa10.1□□□□□ -0.79
SSH1-208ENST00000548522 SMIM13P0DJ93 91 aa10.1□□□□□ -0.79
SSH1-208ENST00000548522 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
SSH1-208ENST00000548522 SCGB1D4Q6XE38 83 aa10.1□□□□□ -0.79
SSH1-208ENST00000548522 HIST1H4GQ99525 98 aa10.1□□□□□ -0.79
SSH1-208ENST00000548522 GEMIN7Q9H840 131 aaKnown RBP10.1□□□□□ -0.79
SSH1-208ENST00000548522 FXYD2P54710 66 aa10.09□□□□□ -0.79
SSH1-208ENST00000548522 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
SSH1-208ENST00000548522 ZNF561-AS1K7EIQ3 104 aa10.08□□□□□ -0.8
SSH1-208ENST00000548522 Q6ZVH6 145 aa10.08□□□□□ -0.8
SSH1-208ENST00000548522 PSORS1C2Q9UIG4 136 aa10.08□□□□□ -0.8
SSH1-208ENST00000548522 PKIGQ9Y2B9 76 aa10.08□□□□□ -0.8
SSH1-208ENST00000548522 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
SSH1-208ENST00000548522 TIMM17BO60830 172 aa10.07□□□□□ -0.8
SSH1-208ENST00000548522 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
SSH1-208ENST00000548522 CD164L2Q6UWJ8 174 aa10.07□□□□□ -0.8
SSH1-208ENST00000548522 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
SSH1-208ENST00000548522 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
SSH1-208ENST00000548522 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
SSH1-208ENST00000548522 SS18Q15532 418 aa10.05□□□□□ -0.8
SSH1-208ENST00000548522 A0A0J9YXY3 114 aa10.04□□□□□ -0.8
SSH1-208ENST00000548522 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
SSH1-208ENST00000548522 RNASE13Q5GAN3 156 aaKnown RBP10.04□□□□□ -0.8
SSH1-208ENST00000548522 PHF5AQ7RTV0 110 aaKnown RBP10.04□□□□□ -0.8
SSH1-208ENST00000548522 PPDPFQ9H3Y8 114 aa10.04□□□□□ -0.8
SSH1-208ENST00000548522 VAMP3Q15836 100 aa10.03□□□□□ -0.8
SSH1-208ENST00000548522 LINC01561Q8N1V8 128 aa10.03□□□□□ -0.8
SSH1-208ENST00000548522 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
SSH1-208ENST00000548522 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
SSH1-208ENST00000548522 SPANXCQ9NY87 97 aa10.03□□□□□ -0.8
SSH1-208ENST00000548522 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
SSH1-208ENST00000548522 NDUFA1O15239 70 aa10.02□□□□□ -0.81
SSH1-208ENST00000548522 APOMO95445 188 aa10.02□□□□□ -0.81
SSH1-208ENST00000548522 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.81
SSH1-208ENST00000548522 C1orf137Q5JT78 98 aa10.02□□□□□ -0.81
SSH1-208ENST00000548522 GTF2H5Q6ZYL4 71 aa10.02□□□□□ -0.81
SSH1-208ENST00000548522 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
SSH1-208ENST00000548522 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
SSH1-208ENST00000548522 NDUFA12Q9UI09 145 aa10.02□□□□□ -0.81
SSH1-208ENST00000548522 COX7A2LO14548 114 aa10.01□□□□□ -0.81
SSH1-208ENST00000548522 MALP21145 153 aa10.01□□□□□ -0.81
SSH1-208ENST00000548522 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
SSH1-208ENST00000548522 A0A1W2PPM0 123 aa10□□□□□ -0.81
SSH1-208ENST00000548522 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
SSH1-208ENST00000548522 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
SSH1-208ENST00000548522 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
SSH1-208ENST00000548522 FABP2P12104 132 aa9.99□□□□□ -0.81
SSH1-208ENST00000548522 IFITM1P13164 125 aa9.99□□□□□ -0.81
SSH1-208ENST00000548522 HERV-K104P63124 156 aa9.99□□□□□ -0.81
SSH1-208ENST00000548522 RPL24P83731 157 aaKnown RBP9.99□□□□□ -0.81
SSH1-208ENST00000548522 C5orf38Q86SI9 138 aa9.99□□□□□ -0.81
SSH1-208ENST00000548522 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
SSH1-208ENST00000548522 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
SSH1-208ENST00000548522 H3BUT2 72 aa9.98□□□□□ -0.81
SSH1-208ENST00000548522 K7EP34 96 aa9.98□□□□□ -0.81
SSH1-208ENST00000548522 LITAFQ99732 161 aa9.98□□□□□ -0.81
SSH1-208ENST00000548522 A0A0B4J2C4 111 aa9.97□□□□□ -0.81
SSH1-208ENST00000548522 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
SSH1-208ENST00000548522 SPAG11BQ08648 103 aa9.97□□□□□ -0.81
SSH1-208ENST00000548522 IGHV3OR16-9A0A0B4J2B5 98 aa9.96□□□□□ -0.82
SSH1-208ENST00000548522 GAGE10A6NGK3 116 aa9.96□□□□□ -0.82
SSH1-208ENST00000548522 IGLV7-43P04211 117 aa9.96□□□□□ -0.82
SSH1-208ENST00000548522 LYRM7Q5U5X0 104 aa9.96□□□□□ -0.82
SSH1-208ENST00000548522 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
SSH1-208ENST00000548522 A0A087WZ39 114 aa9.95□□□□□ -0.82
SSH1-208ENST00000548522 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
SSH1-208ENST00000548522 DIRC1Q969H9 104 aa9.94□□□□□ -0.82
SSH1-208ENST00000548522 RAB37Q96AX2 223 aa9.94□□□□□ -0.82
SSH1-208ENST00000548522 H0Y9J4 135 aa9.93□□□□□ -0.82
SSH1-208ENST00000548522 K7ERJ3 54 aa9.93□□□□□ -0.82
SSH1-208ENST00000548522 C10orf25Q5T742 122 aa9.93□□□□□ -0.82
SSH1-208ENST00000548522 SPCS1Q9Y6A9 102 aa9.93□□□□□ -0.82
SSH1-208ENST00000548522 KRTAP1-4P0C5Y4 121 aa9.92□□□□□ -0.82
SSH1-208ENST00000548522 CFC1BP0CG36 223 aa9.91□□□□□ -0.82
SSH1-208ENST00000548522 CFC1P0CG37 223 aa9.91□□□□□ -0.82
SSH1-208ENST00000548522 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
SSH1-208ENST00000548522 KRTAP7-1Q8IUC3 87 aa9.91□□□□□ -0.82
SSH1-208ENST00000548522 MUSTN1Q8IVN3 82 aa9.91□□□□□ -0.82
SSH1-208ENST00000548522 PRO1854Q9UHT4 67 aa9.91□□□□□ -0.82
SSH1-208ENST00000548522 A4D1N5 150 aa9.9□□□□□ -0.82
SSH1-208ENST00000548522 RNF151Q2KHN1 245 aa9.9□□□□□ -0.82
SSH1-208ENST00000548522 COX7B2Q8TF08 81 aa9.9□□□□□ -0.82
SSH1-208ENST00000548522 TSPAN13O95857 204 aa9.88□□□□□ -0.83
SSH1-208ENST00000548522 UNQ6190/PRO20217Q6UXQ8 127 aa9.88□□□□□ -0.83
SSH1-208ENST00000548522 C6orf48Q9UBA6 75 aa9.88□□□□□ -0.83
SSH1-208ENST00000548522 TRBV20-1A0A075B6N2 111 aa9.87□□□□□ -0.83
SSH1-208ENST00000548522 CXCL5P42830 114 aa9.87□□□□□ -0.83
SSH1-208ENST00000548522 PRR4Q16378 134 aa9.87□□□□□ -0.83
SSH1-208ENST00000548522 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms