RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 SPINK1P00995 79 aa11.29□□□□□ -0.6
GATC-202ENST00000548171 Q8NBF4 154 aa11.29□□□□□ -0.6
GATC-202ENST00000548171 ZNF625Q96I27 306 aaPredicted RBP11.28□□□□□ -0.6
GATC-202ENST00000548171 FSIP2Q5CZC0 6907 aa11.28□□□□□ -0.6
GATC-202ENST00000548171 ZNF22P17026 224 aaPredicted RBP11.27□□□□□ -0.61
GATC-202ENST00000548171 FA2HQ7L5A8 372 aa11.27□□□□□ -0.61
GATC-202ENST00000548171 DAND5Q8N907 189 aa11.27□□□□□ -0.61
GATC-202ENST00000548171 SMCO4Q9NRQ5 59 aa11.27□□□□□ -0.61
GATC-202ENST00000548171 CRCT1Q9UGL9 99 aa11.27□□□□□ -0.61
GATC-202ENST00000548171 KRTAP4-1Q9BYQ7 146 aa11.26□□□□□ -0.61
GATC-202ENST00000548171 NDUFA12Q9UI09 145 aa11.26□□□□□ -0.61
GATC-202ENST00000548171 NDUFA6P56556 154 aa11.24□□□□□ -0.61
GATC-202ENST00000548171 A0A1B0GVG6 124 aa11.23□□□□□ -0.61
GATC-202ENST00000548171 FAM19A2Q8N3H0 131 aa11.23□□□□□ -0.61
GATC-202ENST00000548171 PRYO14603 147 aa11.22□□□□□ -0.61
GATC-202ENST00000548171 LINC00158P58513 81 aa11.21□□□□□ -0.61
GATC-202ENST00000548171 RPS29P62273 56 aaKnown RBP11.21□□□□□ -0.61
GATC-202ENST00000548171 COX19Q49B96 90 aa11.2□□□□□ -0.62
GATC-202ENST00000548171 SPRR1AP35321 89 aa11.19□□□□□ -0.62
GATC-202ENST00000548171 LINC00483Q53H64 154 aa11.19□□□□□ -0.62
GATC-202ENST00000548171 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
GATC-202ENST00000548171 S100PP25815 95 aa11.18□□□□□ -0.62
GATC-202ENST00000548171 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
GATC-202ENST00000548171 KCNQ1DNQ9H478 68 aa11.18□□□□□ -0.62
GATC-202ENST00000548171 A0A096LNJ9 63 aa11.16□□□□□ -0.62
GATC-202ENST00000548171 ETDCA0A1B0GVM5 59 aa11.16□□□□□ -0.62
GATC-202ENST00000548171 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
GATC-202ENST00000548171 Q8N377 158 aa11.16□□□□□ -0.62
GATC-202ENST00000548171 KRTAP4-16G5E9R7 235 aaPredicted RBP11.15□□□□□ -0.62
GATC-202ENST00000548171 SLC25A20O43772 301 aa11.15□□□□□ -0.62
GATC-202ENST00000548171 FABP9Q0Z7S8 132 aa11.15□□□□□ -0.62
GATC-202ENST00000548171 XP32Q5T750 250 aa11.15□□□□□ -0.62
GATC-202ENST00000548171 ATP6V1G1O75348 118 aa11.14□□□□□ -0.63
GATC-202ENST00000548171 HBDP02042 147 aa11.14□□□□□ -0.63
GATC-202ENST00000548171 SSBP3-AS1Q7Z2R9 100 aa11.14□□□□□ -0.63
GATC-202ENST00000548171 BAGE3Q86Y29 109 aa11.14□□□□□ -0.63
GATC-202ENST00000548171 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
GATC-202ENST00000548171 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
GATC-202ENST00000548171 GAGE2AQ6NT46 116 aa11.13□□□□□ -0.63
GATC-202ENST00000548171 S100A12P80511 92 aa11.12□□□□□ -0.63
GATC-202ENST00000548171 MOBPQ13875 183 aa11.12□□□□□ -0.63
GATC-202ENST00000548171 NCR3O14931 201 aa11.11□□□□□ -0.63
GATC-202ENST00000548171 LINC00614P0C842 121 aa11.11□□□□□ -0.63
GATC-202ENST00000548171 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
GATC-202ENST00000548171 LCE2CQ5TA81 110 aa11.1□□□□□ -0.63
GATC-202ENST00000548171 SMIM13P0DJ93 91 aa11.09□□□□□ -0.63
GATC-202ENST00000548171 URB1-AS1Q96HZ7 61 aa11.09□□□□□ -0.63
GATC-202ENST00000548171 SEC11CQ9BY50 192 aa11.09□□□□□ -0.63
GATC-202ENST00000548171 TRBV10-3A0A0K0K1G6 114 aa11.08□□□□□ -0.64
GATC-202ENST00000548171 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
GATC-202ENST00000548171 TMEM223A0PJW6 202 aa11.07□□□□□ -0.64
GATC-202ENST00000548171 TMEM218A2RU14 115 aa11.07□□□□□ -0.64
GATC-202ENST00000548171 MEIG1Q5JSS6 88 aa11.07□□□□□ -0.64
GATC-202ENST00000548171 MIR7-3HGQ8N6C7 128 aa11.07□□□□□ -0.64
GATC-202ENST00000548171 C18orf32Q8TCD1 76 aa11.07□□□□□ -0.64
GATC-202ENST00000548171 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
GATC-202ENST00000548171 LINC00587B1AMM8 73 aa11.06□□□□□ -0.64
GATC-202ENST00000548171 B5MCH6 92 aa11.06□□□□□ -0.64
GATC-202ENST00000548171 PMCHL1Q16048 86 aa11.06□□□□□ -0.64
GATC-202ENST00000548171 HERV-K104P63124 156 aa11.05□□□□□ -0.64
GATC-202ENST00000548171 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
GATC-202ENST00000548171 CFC1BP0CG36 223 aa11.04□□□□□ -0.64
GATC-202ENST00000548171 ERC2-IT1O76042 136 aa11.03□□□□□ -0.64
GATC-202ENST00000548171 KRTAP19-2Q3LHN2 52 aa11.02□□□□□ -0.65
GATC-202ENST00000548171 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
GATC-202ENST00000548171 Q6ZRX8 168 aa11.01□□□□□ -0.65
GATC-202ENST00000548171 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
GATC-202ENST00000548171 MT1HP80294 61 aa11□□□□□ -0.65
GATC-202ENST00000548171 Q9BRP9 147 aa11□□□□□ -0.65
GATC-202ENST00000548171 TRAPPC1Q9Y5R8 145 aa11□□□□□ -0.65
GATC-202ENST00000548171 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
GATC-202ENST00000548171 DDTP30046 118 aa10.98□□□□□ -0.65
GATC-202ENST00000548171 C9orf153Q5TBE3 101 aa10.98□□□□□ -0.65
GATC-202ENST00000548171 LOC107984156A0A0G2JMH3 177 aa10.97□□□□□ -0.65
GATC-202ENST00000548171 MYMXA0A1B0GTQ4 84 aa10.97□□□□□ -0.65
GATC-202ENST00000548171 ARL17AQ8IVW1 177 aa10.97□□□□□ -0.65
GATC-202ENST00000548171 RHEBQ15382 184 aa10.96□□□□□ -0.65
GATC-202ENST00000548171 JOSD1Q15040 202 aaPredicted RBP10.95□□□□□ -0.66
GATC-202ENST00000548171 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
GATC-202ENST00000548171 RPS10P5Q9NQ39 176 aa10.94□□□□□ -0.66
GATC-202ENST00000548171 IGLV8-61A0A075B6I0 122 aa10.93□□□□□ -0.66
GATC-202ENST00000548171 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
GATC-202ENST00000548171 SPANXB1Q9NS25 103 aaPredicted RBP10.92□□□□□ -0.66
GATC-202ENST00000548171 LIMD2Q9BT23 127 aa10.91□□□□□ -0.66
GATC-202ENST00000548171 C5orf52A6NGY3 159 aa10.9□□□□□ -0.66
GATC-202ENST00000548171 IGLV6-57P01721 117 aa10.9□□□□□ -0.66
GATC-202ENST00000548171 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.66
GATC-202ENST00000548171 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
GATC-202ENST00000548171 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
GATC-202ENST00000548171 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
GATC-202ENST00000548171 MIEN1Q9BRT3 115 aa10.89□□□□□ -0.67
GATC-202ENST00000548171 NDUFC2O95298 119 aa10.88□□□□□ -0.67
GATC-202ENST00000548171 IFITM2Q01629 132 aa10.88□□□□□ -0.67
GATC-202ENST00000548171 TRAV23DV6A0A075B6W5 121 aa10.87□□□□□ -0.67
GATC-202ENST00000548171 KRTAP10-6P60371 365 aaPredicted RBP10.86□□□□□ -0.67
GATC-202ENST00000548171 LEPROTO15243 131 aa10.85□□□□□ -0.67
GATC-202ENST00000548171 ZNF73O43830 326 aaPredicted RBP10.85□□□□□ -0.67
GATC-202ENST00000548171 COMMD7Q86VX2 200 aa10.85□□□□□ -0.67
GATC-202ENST00000548171 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
GATC-202ENST00000548171 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms