RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 C9orf66Q5T8R8 295 aa9.43□□□□□ -0.9
SLC38A1-204ENST00000546893 ZANQ9Y493 2812 aa9.42□□□□□ -0.9
SLC38A1-204ENST00000546893 NDUFC1O43677 76 aa9.42□□□□□ -0.9
SLC38A1-204ENST00000546893 APOC4P55056 127 aa9.42□□□□□ -0.9
SLC38A1-204ENST00000546893 Q6ZRU5 148 aa9.42□□□□□ -0.9
SLC38A1-204ENST00000546893 RETNQ9HD89 108 aa9.42□□□□□ -0.9
SLC38A1-204ENST00000546893 UNC79Q9P2D8 2635 aa9.41□□□□□ -0.9
SLC38A1-204ENST00000546893 UBL5Q9BZL1 73 aa9.41□□□□□ -0.9
SLC38A1-204ENST00000546893 FASNP49327 2511 aaKnown RBP9.41□□□□□ -0.9
SLC38A1-204ENST00000546893 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.9
SLC38A1-204ENST00000546893 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
SLC38A1-204ENST00000546893 CCDC168Q8NDH2 2452 aa9.4□□□□□ -0.9
SLC38A1-204ENST00000546893 ITPR3Q14573 2671 aa9.39□□□□□ -0.91
SLC38A1-204ENST00000546893 ITPR2Q14571 2701 aa9.39□□□□□ -0.91
SLC38A1-204ENST00000546893 Q8N814 137 aa9.39□□□□□ -0.91
SLC38A1-204ENST00000546893 MIFP14174 115 aa9.38□□□□□ -0.91
SLC38A1-204ENST00000546893 CHCHD10Q8WYQ3 142 aaPredicted RBP9.38□□□□□ -0.91
SLC38A1-204ENST00000546893 AKAP9Q99996 3911 aa9.38□□□□□ -0.91
SLC38A1-204ENST00000546893 HECTD1Q9ULT8 2610 aa9.38□□□□□ -0.91
SLC38A1-204ENST00000546893 TM2D3Q9BRN9 247 aa9.38□□□□□ -0.91
SLC38A1-204ENST00000546893 TEX15Q9BXT5 2789 aa9.38□□□□□ -0.91
SLC38A1-204ENST00000546893 CD164Q04900 197 aa9.37□□□□□ -0.91
SLC38A1-204ENST00000546893 REG3AQ06141 175 aa9.37□□□□□ -0.91
SLC38A1-204ENST00000546893 LINC00269Q8N2A0 174 aa9.37□□□□□ -0.91
SLC38A1-204ENST00000546893 MYO9AB2RTY4 2548 aa9.36□□□□□ -0.91
SLC38A1-204ENST00000546893 ANGP03950 147 aaKnown RBP9.35□□□□□ -0.91
SLC38A1-204ENST00000546893 LINC01547P58512 204 aaPredicted RBP9.35□□□□□ -0.91
SLC38A1-204ENST00000546893 DAD1P61803 113 aa9.35□□□□□ -0.91
SLC38A1-204ENST00000546893 ESRGQ1W209 222 aa9.35□□□□□ -0.91
SLC38A1-204ENST00000546893 LELP1Q5T871 98 aa9.35□□□□□ -0.91
SLC38A1-204ENST00000546893 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
SLC38A1-204ENST00000546893 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
SLC38A1-204ENST00000546893 NANOS2P60321 138 aaKnown RBP9.34□□□□□ -0.91
SLC38A1-204ENST00000546893 C11orf68Q9H3H3 251 aaKnown RBP9.34□□□□□ -0.91
SLC38A1-204ENST00000546893 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
SLC38A1-204ENST00000546893 FLNAP21333 2647 aaKnown RBP9.34□□□□□ -0.91
SLC38A1-204ENST00000546893 SMR3AQ99954 134 aa9.33□□□□□ -0.92
SLC38A1-204ENST00000546893 PDE6GP18545 87 aa9.32□□□□□ -0.92
SLC38A1-204ENST00000546893 SPART-AS1P0CW21 52 aa9.32□□□□□ -0.92
SLC38A1-204ENST00000546893 Q8N3U1 123 aa9.31□□□□□ -0.92
SLC38A1-204ENST00000546893 TMEM254Q8TBM7 123 aa9.31□□□□□ -0.92
SLC38A1-204ENST00000546893 KRTAP10-3P60369 221 aa9.31□□□□□ -0.92
SLC38A1-204ENST00000546893 CLPSL2Q6UWE3 100 aa9.31□□□□□ -0.92
SLC38A1-204ENST00000546893 LINC00575Q6W349 94 aa9.31□□□□□ -0.92
SLC38A1-204ENST00000546893 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
SLC38A1-204ENST00000546893 M0R2N4 97 aa9.3□□□□□ -0.92
SLC38A1-204ENST00000546893 HAMPP81172 84 aa9.3□□□□□ -0.92
SLC38A1-204ENST00000546893 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
SLC38A1-204ENST00000546893 TLN2Q9Y4G6 2542 aa9.3□□□□□ -0.92
SLC38A1-204ENST00000546893 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
SLC38A1-204ENST00000546893 Q6ZTC4 211 aa9.3□□□□□ -0.92
SLC38A1-204ENST00000546893 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
SLC38A1-204ENST00000546893 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
SLC38A1-204ENST00000546893 Q6ZQT0 140 aa9.29□□□□□ -0.92
SLC38A1-204ENST00000546893 Q6ZVQ6 151 aa9.29□□□□□ -0.92
SLC38A1-204ENST00000546893 ACANP16112 2415 aa9.29□□□□□ -0.92
SLC38A1-204ENST00000546893 C6orf99Q4VX62 202 aa9.28□□□□□ -0.92
SLC38A1-204ENST00000546893 LAMTOR3Q9UHA4 124 aa9.28□□□□□ -0.92
SLC38A1-204ENST00000546893 A0A096LPF7 62 aa9.28□□□□□ -0.92
SLC38A1-204ENST00000546893 Q8NAQ8 132 aa9.28□□□□□ -0.92
SLC38A1-204ENST00000546893 SONP18583 2426 aaKnown RBP9.28□□□□□ -0.92
SLC38A1-204ENST00000546893 IGLV6-57P01721 117 aa9.27□□□□□ -0.92
SLC38A1-204ENST00000546893 NREPQ16612 68 aa9.27□□□□□ -0.92
SLC38A1-204ENST00000546893 DEFB135Q30KP9 77 aa9.27□□□□□ -0.92
SLC38A1-204ENST00000546893 ANK3Q12955 4377 aaKnown RBP9.27□□□□□ -0.93
SLC38A1-204ENST00000546893 H3BNG1 76 aa9.26□□□□□ -0.93
SLC38A1-204ENST00000546893 WNK1Q9H4A3 2382 aa9.26□□□□□ -0.93
SLC38A1-204ENST00000546893 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
SLC38A1-204ENST00000546893 CXCL6P80162 114 aa9.25□□□□□ -0.93
SLC38A1-204ENST00000546893 NOTCH2Q04721 2471 aa9.25□□□□□ -0.93
SLC38A1-204ENST00000546893 IGLV10-54A0A075B6I4 117 aa9.25□□□□□ -0.93
SLC38A1-204ENST00000546893 Q6ZRP5 223 aa9.25□□□□□ -0.93
SLC38A1-204ENST00000546893 CYSRT1A8MQ03 144 aa9.24□□□□□ -0.93
SLC38A1-204ENST00000546893 PRYO14603 147 aa9.24□□□□□ -0.93
SLC38A1-204ENST00000546893 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
SLC38A1-204ENST00000546893 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
SLC38A1-204ENST00000546893 CUBNO60494 3623 aa9.23□□□□□ -0.93
SLC38A1-204ENST00000546893 Q1T7F1 81 aa9.22□□□□□ -0.93
SLC38A1-204ENST00000546893 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
SLC38A1-204ENST00000546893 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
SLC38A1-204ENST00000546893 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
SLC38A1-204ENST00000546893 OTOGQ6ZRI0 2925 aa9.22□□□□□ -0.93
SLC38A1-204ENST00000546893 SCXQ7RTU7 201 aa9.21□□□□□ -0.93
SLC38A1-204ENST00000546893 NOTCH3Q9UM47 2321 aa9.21□□□□□ -0.93
SLC38A1-204ENST00000546893 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.94
SLC38A1-204ENST00000546893 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
SLC38A1-204ENST00000546893 INAFM1C9JVW0 142 aa9.2□□□□□ -0.94
SLC38A1-204ENST00000546893 BPY2O14599 106 aa9.2□□□□□ -0.94
SLC38A1-204ENST00000546893 LRCOL1A6NCL2 159 aa9.2□□□□□ -0.94
SLC38A1-204ENST00000546893 CELA1Q9UNI1 258 aa9.2□□□□□ -0.94
SLC38A1-204ENST00000546893 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
SLC38A1-204ENST00000546893 SETXQ7Z333 2677 aaKnown RBP9.19□□□□□ -0.94
SLC38A1-204ENST00000546893 HIVEP2P31629 2446 aa9.19□□□□□ -0.94
SLC38A1-204ENST00000546893 EGFEM1PQ0D2K5 195 aa9.19□□□□□ -0.94
SLC38A1-204ENST00000546893 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
SLC38A1-204ENST00000546893 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
SLC38A1-204ENST00000546893 DEFB4AO15263 64 aa9.17□□□□□ -0.94
SLC38A1-204ENST00000546893 RBM12B-AS1Q9P1G2 102 aa9.17□□□□□ -0.94
SLC38A1-204ENST00000546893 A8MU10 97 aa9.17□□□□□ -0.94
SLC38A1-204ENST00000546893 PSPHP1O15172 72 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms