RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 NMUP48645 174 aa10.45□□□□□ -0.74
LTBR-215ENST00000546296 SNRPEP62304 92 aaKnown RBP10.45□□□□□ -0.74
LTBR-215ENST00000546296 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
LTBR-215ENST00000546296 PLA2G2DQ9UNK4 145 aa10.44□□□□□ -0.74
LTBR-215ENST00000546296 AKR1D1P51857 326 aa10.43□□□□□ -0.74
LTBR-215ENST00000546296 NKAPP1Q8N9T2 125 aa10.43□□□□□ -0.74
LTBR-215ENST00000546296 C1orf137Q5JT78 98 aa10.42□□□□□ -0.74
LTBR-215ENST00000546296 MRPL55Q7Z7F7 128 aaKnown RBP10.42□□□□□ -0.74
LTBR-215ENST00000546296 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
LTBR-215ENST00000546296 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
LTBR-215ENST00000546296 RPL24P83731 157 aaKnown RBP10.41□□□□□ -0.74
LTBR-215ENST00000546296 ATOH7Q8N100 152 aa10.4□□□□□ -0.74
LTBR-215ENST00000546296 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
LTBR-215ENST00000546296 GAGE10A6NGK3 116 aa10.39□□□□□ -0.75
LTBR-215ENST00000546296 C5orf52A6NGY3 159 aa10.39□□□□□ -0.75
LTBR-215ENST00000546296 KRTAP11-1Q8IUC1 163 aa10.39□□□□□ -0.75
LTBR-215ENST00000546296 IGLV5-37A0A075B6J1 123 aa10.38□□□□□ -0.75
LTBR-215ENST00000546296 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
LTBR-215ENST00000546296 RPL37AP8A6NKH3 93 aa10.37□□□□□ -0.75
LTBR-215ENST00000546296 FLG2Q5D862 2391 aaPredicted RBP10.36□□□□□ -0.75
LTBR-215ENST00000546296 IGKV2D-26A0A0A0MRZ7 120 aa10.36□□□□□ -0.75
LTBR-215ENST00000546296 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
LTBR-215ENST00000546296 VPREB1P12018 145 aa10.36□□□□□ -0.75
LTBR-215ENST00000546296 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
LTBR-215ENST00000546296 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
LTBR-215ENST00000546296 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
LTBR-215ENST00000546296 DAND5Q8N907 189 aa10.35□□□□□ -0.75
LTBR-215ENST00000546296 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
LTBR-215ENST00000546296 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
LTBR-215ENST00000546296 SCGB1D1O95968 90 aa10.33□□□□□ -0.76
LTBR-215ENST00000546296 Q8NDZ9 215 aa10.33□□□□□ -0.76
LTBR-215ENST00000546296 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
LTBR-215ENST00000546296 PKHD1L1Q86WI1 4243 aa10.33□□□□□ -0.76
LTBR-215ENST00000546296 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
LTBR-215ENST00000546296 HSBP1L1C9JCN9 74 aa10.32□□□□□ -0.76
LTBR-215ENST00000546296 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
LTBR-215ENST00000546296 TTTY13Q9BZ97 58 aa10.32□□□□□ -0.76
LTBR-215ENST00000546296 IGKV2-28A0A075B6P5 120 aa10.31□□□□□ -0.76
LTBR-215ENST00000546296 J3QL48 77 aa10.31□□□□□ -0.76
LTBR-215ENST00000546296 M0R378 163 aa10.31□□□□□ -0.76
LTBR-215ENST00000546296 IGKV2D-28P01615 120 aa10.31□□□□□ -0.76
LTBR-215ENST00000546296 OXTP01178 125 aa10.3□□□□□ -0.76
LTBR-215ENST00000546296 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
LTBR-215ENST00000546296 KRTAP29-1A8MX34 341 aaPredicted RBP10.29□□□□□ -0.76
LTBR-215ENST00000546296 NCR3O14931 201 aa10.29□□□□□ -0.76
LTBR-215ENST00000546296 TIMM17BO60830 172 aa10.29□□□□□ -0.76
LTBR-215ENST00000546296 NPC2P61916 151 aa10.29□□□□□ -0.76
LTBR-215ENST00000546296 SCGB1D4Q6XE38 83 aa10.29□□□□□ -0.76
LTBR-215ENST00000546296 IGLV1-50A0A075B6I6 118 aa10.28□□□□□ -0.76
LTBR-215ENST00000546296 BCE1O60756 84 aa10.28□□□□□ -0.76
LTBR-215ENST00000546296 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
LTBR-215ENST00000546296 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
LTBR-215ENST00000546296 TMA7Q9Y2S6 64 aaKnown RBP10.28□□□□□ -0.76
LTBR-215ENST00000546296 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
LTBR-215ENST00000546296 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
LTBR-215ENST00000546296 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
LTBR-215ENST00000546296 ZNF861PO60384 105 aa10.25□□□□□ -0.77
LTBR-215ENST00000546296 LITAFQ99732 161 aa10.25□□□□□ -0.77
LTBR-215ENST00000546296 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
LTBR-215ENST00000546296 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
LTBR-215ENST00000546296 UBE2AP49459 152 aa10.24□□□□□ -0.77
LTBR-215ENST00000546296 H0Y9J4 135 aa10.23□□□□□ -0.77
LTBR-215ENST00000546296 NDUFC2O95298 119 aa10.23□□□□□ -0.77
LTBR-215ENST00000546296 SOSTDC1Q6X4U4 206 aa10.23□□□□□ -0.77
LTBR-215ENST00000546296 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
LTBR-215ENST00000546296 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
LTBR-215ENST00000546296 SPANXB1Q9NS25 103 aaPredicted RBP10.23□□□□□ -0.77
LTBR-215ENST00000546296 TRBV10-2A0A0K0K1G8 114 aa10.22□□□□□ -0.77
LTBR-215ENST00000546296 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
LTBR-215ENST00000546296 S100A12P80511 92 aa10.22□□□□□ -0.77
LTBR-215ENST00000546296 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
LTBR-215ENST00000546296 FAT3Q8TDW7 4589 aa10.21□□□□□ -0.77
LTBR-215ENST00000546296 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
LTBR-215ENST00000546296 FAM19A1Q7Z5A9 133 aa10.21□□□□□ -0.77
LTBR-215ENST00000546296 TRBV10-3A0A0K0K1G6 114 aa10.2□□□□□ -0.78
LTBR-215ENST00000546296 S100A7L2Q5SY68 101 aa10.2□□□□□ -0.78
LTBR-215ENST00000546296 PRYO14603 147 aa10.19□□□□□ -0.78
LTBR-215ENST00000546296 DDTP30046 118 aa10.19□□□□□ -0.78
LTBR-215ENST00000546296 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
LTBR-215ENST00000546296 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
LTBR-215ENST00000546296 SPANXDQ9BXN6 97 aa10.19□□□□□ -0.78
LTBR-215ENST00000546296 SPANXCQ9NY87 97 aa10.19□□□□□ -0.78
LTBR-215ENST00000546296 JOSD1Q15040 202 aaPredicted RBP10.18□□□□□ -0.78
LTBR-215ENST00000546296 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
LTBR-215ENST00000546296 Q6ZVH6 145 aa10.17□□□□□ -0.78
LTBR-215ENST00000546296 IFITM1P13164 125 aa10.16□□□□□ -0.78
LTBR-215ENST00000546296 PRLHP81277 87 aa10.16□□□□□ -0.78
LTBR-215ENST00000546296 ETDCA0A1B0GVM5 59 aa10.15□□□□□ -0.78
LTBR-215ENST00000546296 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
LTBR-215ENST00000546296 OR13C6PQ8NH95 151 aa10.15□□□□□ -0.78
LTBR-215ENST00000546296 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
LTBR-215ENST00000546296 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
LTBR-215ENST00000546296 LINC00518Q8N0U6 118 aa10.14□□□□□ -0.79
LTBR-215ENST00000546296 VAMP8Q9BV40 100 aa10.14□□□□□ -0.79
LTBR-215ENST00000546296 PAM16Q9Y3D7 125 aa10.14□□□□□ -0.79
LTBR-215ENST00000546296 COX8AP10176 69 aa10.13□□□□□ -0.79
LTBR-215ENST00000546296 SPATA45Q537H7 98 aa10.13□□□□□ -0.79
LTBR-215ENST00000546296 LINC00337Q8N6G1 96 aa10.13□□□□□ -0.79
LTBR-215ENST00000546296 MT1HL1P0DM35 61 aa10.12□□□□□ -0.79
LTBR-215ENST00000546296 CBY1Q9Y3M2 126 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms