RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 SPANXDQ9BXN6 97 aa10.85□□□□□ -0.67
CADM1-220ENST00000546000 SPANXCQ9NY87 97 aa10.85□□□□□ -0.67
CADM1-220ENST00000546000 FAM30AQ9NZY2 134 aa10.85□□□□□ -0.67
CADM1-220ENST00000546000 HERC2O95714 4834 aa10.85□□□□□ -0.67
CADM1-220ENST00000546000 HNRNPA3P51991 378 aaKnown RBP10.84□□□□□ -0.67
CADM1-220ENST00000546000 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
CADM1-220ENST00000546000 LINC00587B1AMM8 73 aa10.83□□□□□ -0.68
CADM1-220ENST00000546000 TSTD3H0UI37 97 aa10.83□□□□□ -0.68
CADM1-220ENST00000546000 LINC00308Q8TCZ7 52 aa10.83□□□□□ -0.68
CADM1-220ENST00000546000 SPANXB1Q9NS25 103 aaPredicted RBP10.83□□□□□ -0.68
CADM1-220ENST00000546000 HIGD1BQ9P298 99 aa10.83□□□□□ -0.68
CADM1-220ENST00000546000 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
CADM1-220ENST00000546000 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
CADM1-220ENST00000546000 SRSF9Q13242 221 aaKnown RBP eCLIP10.81□□□□□ -0.68
CADM1-220ENST00000546000 KRTAP7-1Q8IUC3 87 aa10.81□□□□□ -0.68
CADM1-220ENST00000546000 MUSTN1Q8IVN3 82 aa10.81□□□□□ -0.68
CADM1-220ENST00000546000 HIST1H4GQ99525 98 aa10.81□□□□□ -0.68
CADM1-220ENST00000546000 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
CADM1-220ENST00000546000 FAM19A5Q7Z5A7 132 aaPredicted RBP10.8□□□□□ -0.68
CADM1-220ENST00000546000 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
CADM1-220ENST00000546000 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
CADM1-220ENST00000546000 PKIGQ9Y2B9 76 aa10.78□□□□□ -0.68
CADM1-220ENST00000546000 NCR3O14931 201 aa10.77□□□□□ -0.69
CADM1-220ENST00000546000 VPREB1P12018 145 aa10.77□□□□□ -0.69
CADM1-220ENST00000546000 CTAG1AP78358 180 aa10.77□□□□□ -0.69
CADM1-220ENST00000546000 Q6ZSA8 131 aa10.77□□□□□ -0.69
CADM1-220ENST00000546000 A0A087WYN8 130 aa10.76□□□□□ -0.69
CADM1-220ENST00000546000 HSD52Q0P140 79 aa10.76□□□□□ -0.69
CADM1-220ENST00000546000 DDTP30046 118 aa10.75□□□□□ -0.69
CADM1-220ENST00000546000 FXYD2P54710 66 aa10.75□□□□□ -0.69
CADM1-220ENST00000546000 LOC107984156A0A0G2JMH3 177 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 PCP4L1A6NKN8 68 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 IFITM1P13164 125 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 Q6ZVH6 145 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 SCXQ7RTU7 201 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 ARL17AQ8IVW1 177 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 CEND1Q8N111 149 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 DPH3Q96FX2 82 aa10.74□□□□□ -0.69
CADM1-220ENST00000546000 A4D1N5 150 aa10.73□□□□□ -0.69
CADM1-220ENST00000546000 LINC00474Q9P2X8 69 aa10.73□□□□□ -0.69
CADM1-220ENST00000546000 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
CADM1-220ENST00000546000 GAGE10A6NGK3 116 aa10.72□□□□□ -0.69
CADM1-220ENST00000546000 M0QXV9 152 aa10.72□□□□□ -0.69
CADM1-220ENST00000546000 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
CADM1-220ENST00000546000 TAL2Q16559 108 aa10.72□□□□□ -0.69
CADM1-220ENST00000546000 PHF5AQ7RTV0 110 aaKnown RBP10.72□□□□□ -0.69
CADM1-220ENST00000546000 CIRBP-AS1Q8TBR5 109 aa10.72□□□□□ -0.69
CADM1-220ENST00000546000 HINT1P49773 126 aaPredicted RBP10.71□□□□□ -0.69
CADM1-220ENST00000546000 PLA2G2DQ9UNK4 145 aa10.71□□□□□ -0.69
CADM1-220ENST00000546000 PLAC8Q9NZF1 115 aa10.7□□□□□ -0.7
CADM1-220ENST00000546000 C22orf24Q9Y442 160 aa10.7□□□□□ -0.7
CADM1-220ENST00000546000 IGLV5-37A0A075B6J1 123 aa10.69□□□□□ -0.7
CADM1-220ENST00000546000 NKAPP1Q8N9T2 125 aa10.69□□□□□ -0.7
CADM1-220ENST00000546000 C7orf33Q8WU49 177 aa10.69□□□□□ -0.7
CADM1-220ENST00000546000 KIAA1109Q2LD37 5005 aa10.69□□□□□ -0.7
CADM1-220ENST00000546000 RYR1P21817 5038 aa10.68□□□□□ -0.7
CADM1-220ENST00000546000 NDUFC2O95298 119 aa10.68□□□□□ -0.7
CADM1-220ENST00000546000 RPL24P83731 157 aaKnown RBP10.68□□□□□ -0.7
CADM1-220ENST00000546000 BVES-AS1Q5T3Y7 98 aa10.68□□□□□ -0.7
CADM1-220ENST00000546000 KRTAP11-1Q8IUC1 163 aa10.68□□□□□ -0.7
CADM1-220ENST00000546000 LINC00337Q8N6G1 96 aa10.68□□□□□ -0.7
CADM1-220ENST00000546000 PPDPFQ9H3Y8 114 aa10.68□□□□□ -0.7
CADM1-220ENST00000546000 EPM2AB3EWF7 344 aa10.67□□□□□ -0.7
CADM1-220ENST00000546000 K7ERJ3 54 aa10.67□□□□□ -0.7
CADM1-220ENST00000546000 XGP55808 180 aa10.67□□□□□ -0.7
CADM1-220ENST00000546000 COPS9Q8WXC6 57 aa10.67□□□□□ -0.7
CADM1-220ENST00000546000 RPL37AP8A6NKH3 93 aa10.66□□□□□ -0.7
CADM1-220ENST00000546000 MRPL55Q7Z7F7 128 aaKnown RBP10.66□□□□□ -0.7
CADM1-220ENST00000546000 BATFQ16520 125 aa10.65□□□□□ -0.7
CADM1-220ENST00000546000 LINC00167Q96N53 147 aa10.65□□□□□ -0.7
CADM1-220ENST00000546000 M0R378 163 aa10.64□□□□□ -0.71
CADM1-220ENST00000546000 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
CADM1-220ENST00000546000 CFC1P0CG37 223 aa10.64□□□□□ -0.71
CADM1-220ENST00000546000 NHP2Q9NX24 153 aaKnown RBP10.64□□□□□ -0.71
CADM1-220ENST00000546000 TRBV10-3A0A0K0K1G6 114 aa10.63□□□□□ -0.71
CADM1-220ENST00000546000 HSPG2P98160 4391 aa10.63□□□□□ -0.71
CADM1-220ENST00000546000 OR13C6PQ8NH95 151 aa10.62□□□□□ -0.71
CADM1-220ENST00000546000 TRBV10-2A0A0K0K1G8 114 aa10.61□□□□□ -0.71
CADM1-220ENST00000546000 TMEM238LA0A1B0GVL6 79 aa10.61□□□□□ -0.71
CADM1-220ENST00000546000 A6NDN8 102 aa10.61□□□□□ -0.71
CADM1-220ENST00000546000 A6NJY4 79 aa10.61□□□□□ -0.71
CADM1-220ENST00000546000 M0R143 59 aa10.61□□□□□ -0.71
CADM1-220ENST00000546000 RPL13AP40429 203 aaKnown RBP10.61□□□□□ -0.71
CADM1-220ENST00000546000 UBE2BP63146 152 aa10.61□□□□□ -0.71
CADM1-220ENST00000546000 S100A7L2Q5SY68 101 aa10.6□□□□□ -0.71
CADM1-220ENST00000546000 A0A0B4J2C4 111 aa10.59□□□□□ -0.71
CADM1-220ENST00000546000 IGLV6-57P01721 117 aa10.59□□□□□ -0.71
CADM1-220ENST00000546000 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
CADM1-220ENST00000546000 RAB37Q96AX2 223 aa10.59□□□□□ -0.71
CADM1-220ENST00000546000 IGLV1-50A0A075B6I6 118 aa10.58□□□□□ -0.72
CADM1-220ENST00000546000 H7C2G1 150 aa10.58□□□□□ -0.72
CADM1-220ENST00000546000 LBHQ53QV2 105 aaPredicted RBP10.58□□□□□ -0.72
CADM1-220ENST00000546000 SNHG12Q9BXW3 62 aa10.58□□□□□ -0.72
CADM1-220ENST00000546000 A0A1B0GWB2 263 aa10.57□□□□□ -0.72
CADM1-220ENST00000546000 FAT1Q14517 4588 aa10.56□□□□□ -0.72
CADM1-220ENST00000546000 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
CADM1-220ENST00000546000 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
CADM1-220ENST00000546000 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
CADM1-220ENST00000546000 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
CADM1-220ENST00000546000 CDK2AP2O75956 126 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms