RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
COL4A6-209ENST00000545689 MDFIQ99750 246 aa8.5□□□□□ -1.05
COL4A6-209ENST00000545689 PMAIP1Q13794 54 aa8.5□□□□□ -1.05
COL4A6-209ENST00000545689 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
COL4A6-209ENST00000545689 C2CD3Q4AC94 2353 aa8.49□□□□□ -1.05
COL4A6-209ENST00000545689 CSNK1G2-AS1Q8NCQ2 148 aa8.49□□□□□ -1.05
COL4A6-209ENST00000545689 PIEZO1Q92508 2521 aa8.49□□□□□ -1.05
COL4A6-209ENST00000545689 CCDC168Q8NDH2 2452 aa8.48□□□□□ -1.05
COL4A6-209ENST00000545689 LINC00476Q8WZB0 136 aa8.47□□□□□ -1.05
COL4A6-209ENST00000545689 DNAH10OSP0CZ25 163 aa8.47□□□□□ -1.05
COL4A6-209ENST00000545689 PSPHP1O15172 72 aa8.47□□□□□ -1.05
COL4A6-209ENST00000545689 SONP18583 2426 aaKnown RBP8.47□□□□□ -1.05
COL4A6-209ENST00000545689 VPREB1P12018 145 aa8.47□□□□□ -1.05
COL4A6-209ENST00000545689 TRBV7-4A0A0J9YYF1 115 aa8.46□□□□□ -1.06
COL4A6-209ENST00000545689 ERC2-IT1O76042 136 aa8.45□□□□□ -1.06
COL4A6-209ENST00000545689 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
COL4A6-209ENST00000545689 PRO0628Q9UI54 55 aa8.44□□□□□ -1.06
COL4A6-209ENST00000545689 A0A096LNT2 108 aa8.43□□□□□ -1.06
COL4A6-209ENST00000545689 KRTAP24-1Q3LI83 254 aa8.43□□□□□ -1.06
COL4A6-209ENST00000545689 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
COL4A6-209ENST00000545689 MOBPQ13875 183 aa8.43□□□□□ -1.06
COL4A6-209ENST00000545689 LINC00612Q8N6U2 182 aa8.42□□□□□ -1.06
COL4A6-209ENST00000545689 EPM2AB3EWF7 344 aa8.42□□□□□ -1.06
COL4A6-209ENST00000545689 Q6ZRP5 223 aa8.42□□□□□ -1.06
COL4A6-209ENST00000545689 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
COL4A6-209ENST00000545689 ACYP2P14621 99 aa8.41□□□□□ -1.06
COL4A6-209ENST00000545689 KCNQ1DNQ9H478 68 aa8.41□□□□□ -1.06
COL4A6-209ENST00000545689 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
COL4A6-209ENST00000545689 PRR34Q9NV39 138 aa8.4□□□□□ -1.06
COL4A6-209ENST00000545689 TRAV22A0A0B4J277 110 aa8.39□□□□□ -1.07
COL4A6-209ENST00000545689 MYO9AB2RTY4 2548 aa8.39□□□□□ -1.07
COL4A6-209ENST00000545689 RTL8CO15255 209 aa8.38□□□□□ -1.07
COL4A6-209ENST00000545689 ST20-AS1Q8NBB2 130 aa8.38□□□□□ -1.07
COL4A6-209ENST00000545689 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
COL4A6-209ENST00000545689 LINC00528Q8N1L1 170 aa8.37□□□□□ -1.07
COL4A6-209ENST00000545689 TM2D3Q9BRN9 247 aa8.37□□□□□ -1.07
COL4A6-209ENST00000545689 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
COL4A6-209ENST00000545689 A8MWP4 228 aa8.35□□□□□ -1.07
COL4A6-209ENST00000545689 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
COL4A6-209ENST00000545689 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
COL4A6-209ENST00000545689 C8orf87E5RJ46 101 aa8.35□□□□□ -1.07
COL4A6-209ENST00000545689 GIG44P09565 113 aaPredicted RBP8.35□□□□□ -1.07
COL4A6-209ENST00000545689 IGKV2D-30A0A075B6S6 120 aa8.34□□□□□ -1.07
COL4A6-209ENST00000545689 SPINK1P00995 79 aa8.34□□□□□ -1.07
COL4A6-209ENST00000545689 IGKV2-30P06310 120 aa8.34□□□□□ -1.07
COL4A6-209ENST00000545689 A0A1B0GU69 56 aa8.34□□□□□ -1.07
COL4A6-209ENST00000545689 ABCA2Q9BZC7 2435 aa8.33□□□□□ -1.08
COL4A6-209ENST00000545689 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
COL4A6-209ENST00000545689 LOC101927531A0A1B0GV80 90 aa8.33□□□□□ -1.08
COL4A6-209ENST00000545689 SERTAD4-AS1Q5TG53 156 aa8.32□□□□□ -1.08
COL4A6-209ENST00000545689 LINC00313P59037 77 aa8.32□□□□□ -1.08
COL4A6-209ENST00000545689 C15orf56Q8N910 161 aa8.31□□□□□ -1.08
COL4A6-209ENST00000545689 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-209ENST00000545689 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
COL4A6-209ENST00000545689 MUC4Q99102 2169 aa8.3□□□□□ -1.08
COL4A6-209ENST00000545689 C4orf26Q17RF5 130 aa8.3□□□□□ -1.08
COL4A6-209ENST00000545689 FAM168BA1KXE4 195 aa8.29□□□□□ -1.08
COL4A6-209ENST00000545689 K7EQZ3 153 aa8.28□□□□□ -1.08
COL4A6-209ENST00000545689 KLKP1Q107X0 134 aa8.27□□□□□ -1.08
COL4A6-209ENST00000545689 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
COL4A6-209ENST00000545689 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
COL4A6-209ENST00000545689 MYO18BQ8IUG5 2567 aa8.27□□□□□ -1.09
COL4A6-209ENST00000545689 ANKRD11Q6UB99 2663 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-209ENST00000545689 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
COL4A6-209ENST00000545689 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
COL4A6-209ENST00000545689 WDR87Q6ZQQ6 2873 aa8.26□□□□□ -1.09
COL4A6-209ENST00000545689 KRTAP10-11P60412 298 aa8.25□□□□□ -1.09
COL4A6-209ENST00000545689 TYMSOSQ8TAI1 123 aa8.25□□□□□ -1.09
COL4A6-209ENST00000545689 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
COL4A6-209ENST00000545689 IGFL1Q6UW32 110 aa8.25□□□□□ -1.09
COL4A6-209ENST00000545689 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
COL4A6-209ENST00000545689 USP9XQ93008 2570 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-209ENST00000545689 ABCA12Q86UK0 2595 aa8.24□□□□□ -1.09
COL4A6-209ENST00000545689 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
COL4A6-209ENST00000545689 KRTAP10-3P60369 221 aa8.24□□□□□ -1.09
COL4A6-209ENST00000545689 Q8N377 158 aa8.23□□□□□ -1.09
COL4A6-209ENST00000545689 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
COL4A6-209ENST00000545689 CYP4F30PQ9H0H9 118 aa8.23□□□□□ -1.09
COL4A6-209ENST00000545689 CEP295Q9C0D2 2601 aa8.22□□□□□ -1.09
COL4A6-209ENST00000545689 LRRK2Q5S007 2527 aa8.22□□□□□ -1.09
COL4A6-209ENST00000545689 K7EIL1 84 aa8.2□□□□□ -1.1
COL4A6-209ENST00000545689 WWC2-AS2Q96NR7 200 aa8.2□□□□□ -1.1
COL4A6-209ENST00000545689 SRCAPQ6ZRS2 3230 aa8.2□□□□□ -1.1
COL4A6-209ENST00000545689 OBSCN-AS1Q96MR7 158 aa8.2□□□□□ -1.1
COL4A6-209ENST00000545689 SSBP3-AS1Q7Z2R9 100 aa8.19□□□□□ -1.1
COL4A6-209ENST00000545689 ZNF575Q86XF7 245 aa8.19□□□□□ -1.1
COL4A6-209ENST00000545689 KRTAP1-3Q8IUG1 177 aa8.19□□□□□ -1.1
COL4A6-209ENST00000545689 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
COL4A6-209ENST00000545689 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
COL4A6-209ENST00000545689 DOPEY1Q5JWR5 2465 aa8.18□□□□□ -1.1
COL4A6-209ENST00000545689 COA5Q86WW8 74 aa8.18□□□□□ -1.1
COL4A6-209ENST00000545689 CNBPP62633 177 aaKnown RBP8.17□□□□□ -1.1
COL4A6-209ENST00000545689 ZNF861PO60384 105 aa8.17□□□□□ -1.1
COL4A6-209ENST00000545689 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
COL4A6-209ENST00000545689 C9orf163Q8N9P6 203 aa8.17□□□□□ -1.1
COL4A6-209ENST00000545689 Q96NJ1 140 aa8.16□□□□□ -1.1
COL4A6-209ENST00000545689 ZNF462Q96JM2 2506 aa8.16□□□□□ -1.1
COL4A6-209ENST00000545689 FN1P02751 2386 aaKnown RBP8.14□□□□□ -1.11
COL4A6-209ENST00000545689 H7BZZ5 65 aa8.14□□□□□ -1.11
COL4A6-209ENST00000545689 USP9YO00507 2555 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 1215.1 ms