RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 Q6ZTC4 211 aa12.39□□□□□ -0.43
CCT4-204ENST00000544079 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
CCT4-204ENST00000544079 COX7BP24311 80 aa12.39□□□□□ -0.43
CCT4-204ENST00000544079 SCXQ7RTU7 201 aa12.38□□□□□ -0.43
CCT4-204ENST00000544079 CSNK1G2-AS1Q8NCQ2 148 aa12.38□□□□□ -0.43
CCT4-204ENST00000544079 C9orf116Q5BN46 136 aaPredicted RBP12.37□□□□□ -0.43
CCT4-204ENST00000544079 DIRC1Q969H9 104 aa12.37□□□□□ -0.43
CCT4-204ENST00000544079 MPLKIPQ8TAP9 179 aa12.36□□□□□ -0.43
CCT4-204ENST00000544079 A0A0J9YWU9 116 aa12.36□□□□□ -0.43
CCT4-204ENST00000544079 IGKV4-1P06312 121 aa12.36□□□□□ -0.43
CCT4-204ENST00000544079 IGHV4-30-4P0DP06 118 aa12.36□□□□□ -0.43
CCT4-204ENST00000544079 LINC00269Q8N2A0 174 aa12.36□□□□□ -0.43
CCT4-204ENST00000544079 CHCHD10Q8WYQ3 142 aaPredicted RBP12.36□□□□□ -0.43
CCT4-204ENST00000544079 USP9YO00507 2555 aaPredicted RBP12.35□□□□□ -0.43
CCT4-204ENST00000544079 CSPG4Q6UVK1 2322 aa12.34□□□□□ -0.43
CCT4-204ENST00000544079 GYPEP15421 78 aa12.34□□□□□ -0.43
CCT4-204ENST00000544079 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
CCT4-204ENST00000544079 CLPSL2Q6UWE3 100 aa12.34□□□□□ -0.43
CCT4-204ENST00000544079 PRR15Q8IV56 129 aa12.34□□□□□ -0.43
CCT4-204ENST00000544079 USP9XQ93008 2570 aaPredicted RBP12.33□□□□□ -0.43
CCT4-204ENST00000544079 TEX15Q9BXT5 2789 aa12.32□□□□□ -0.44
CCT4-204ENST00000544079 UTP20O75691 2785 aaKnown RBP12.31□□□□□ -0.44
CCT4-204ENST00000544079 ELOF1P60002 83 aaKnown RBP12.31□□□□□ -0.44
CCT4-204ENST00000544079 C2CD3Q4AC94 2353 aa12.31□□□□□ -0.44
CCT4-204ENST00000544079 CELA1Q9UNI1 258 aa12.3□□□□□ -0.44
CCT4-204ENST00000544079 GVQW2A0A096LPI5 108 aaPredicted RBP12.3□□□□□ -0.44
CCT4-204ENST00000544079 ZNF73O43830 326 aaPredicted RBP12.29□□□□□ -0.44
CCT4-204ENST00000544079 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
CCT4-204ENST00000544079 ESM1Q9NQ30 184 aa12.29□□□□□ -0.44
CCT4-204ENST00000544079 REG3AQ06141 175 aa12.28□□□□□ -0.44
CCT4-204ENST00000544079 Q1T7F1 81 aa12.28□□□□□ -0.44
CCT4-204ENST00000544079 LCE6AA0A183 80 aa12.27□□□□□ -0.44
CCT4-204ENST00000544079 hDV103S1A0JD37 113 aa12.27□□□□□ -0.44
CCT4-204ENST00000544079 SPAG11BQ08648 103 aa12.27□□□□□ -0.44
CCT4-204ENST00000544079 UNQ6190/PRO20217Q6UXQ8 127 aa12.27□□□□□ -0.44
CCT4-204ENST00000544079 C19orf73Q9NVV2 129 aa12.27□□□□□ -0.44
CCT4-204ENST00000544079 PRO0255Q9UI72 69 aa12.27□□□□□ -0.45
CCT4-204ENST00000544079 C10orf25Q5T742 122 aa12.26□□□□□ -0.45
CCT4-204ENST00000544079 NBPF19A0A087WUL8 3843 aa12.26□□□□□ -0.45
CCT4-204ENST00000544079 Q6ZRU5 148 aa12.26□□□□□ -0.45
CCT4-204ENST00000544079 UNC79Q9P2D8 2635 aa12.25□□□□□ -0.45
CCT4-204ENST00000544079 MYO9AB2RTY4 2548 aa12.25□□□□□ -0.45
CCT4-204ENST00000544079 NOTCH2Q04721 2471 aa12.25□□□□□ -0.45
CCT4-204ENST00000544079 HIGD2AQ9BW72 106 aa12.25□□□□□ -0.45
CCT4-204ENST00000544079 DEFB130BP0DP73 79 aa12.23□□□□□ -0.45
CCT4-204ENST00000544079 DEFB130AP0DP74 79 aa12.23□□□□□ -0.45
CCT4-204ENST00000544079 ANGP03950 147 aaKnown RBP12.23□□□□□ -0.45
CCT4-204ENST00000544079 A0A1B0GW54 56 aa12.22□□□□□ -0.45
CCT4-204ENST00000544079 Q8N9L7 120 aa12.22□□□□□ -0.45
CCT4-204ENST00000544079 IGLV10-54A0A075B6I4 117 aa12.22□□□□□ -0.45
CCT4-204ENST00000544079 NOTCH3Q9UM47 2321 aa12.21□□□□□ -0.45
CCT4-204ENST00000544079 PMAIP1Q13794 54 aa12.21□□□□□ -0.46
CCT4-204ENST00000544079 WFDC10AQ9H1F0 79 aa12.21□□□□□ -0.46
CCT4-204ENST00000544079 CRYBG3Q68DQ2 2970 aa12.2□□□□□ -0.46
CCT4-204ENST00000544079 HIGD2BQ4VC39 106 aa12.2□□□□□ -0.46
CCT4-204ENST00000544079 VPS13CQ709C8 3753 aa12.2□□□□□ -0.46
CCT4-204ENST00000544079 IGLV1-51P01701 117 aa12.18□□□□□ -0.46
CCT4-204ENST00000544079 LINC00528Q8N1L1 170 aa12.18□□□□□ -0.46
CCT4-204ENST00000544079 CR1P17927 2039 aa12.17□□□□□ -0.46
CCT4-204ENST00000544079 Q6ZRP5 223 aa12.16□□□□□ -0.46
CCT4-204ENST00000544079 CENPEQ02224 2701 aa12.16□□□□□ -0.46
CCT4-204ENST00000544079 ITPR2Q14571 2701 aa12.16□□□□□ -0.46
CCT4-204ENST00000544079 ZCCHC13Q8WW36 166 aaKnown RBP12.16□□□□□ -0.46
CCT4-204ENST00000544079 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.46
CCT4-204ENST00000544079 M0R378 163 aa12.15□□□□□ -0.46
CCT4-204ENST00000544079 A0A096LPF7 62 aa12.14□□□□□ -0.47
CCT4-204ENST00000544079 MAPK1IP1LQ8NDC0 245 aa12.14□□□□□ -0.47
CCT4-204ENST00000544079 DOPEY1Q5JWR5 2465 aa12.14□□□□□ -0.47
CCT4-204ENST00000544079 WNK1Q9H4A3 2382 aa12.14□□□□□ -0.47
CCT4-204ENST00000544079 VPREB1P12018 145 aa12.14□□□□□ -0.47
CCT4-204ENST00000544079 C6orf48Q9UBA6 75 aa12.14□□□□□ -0.47
CCT4-204ENST00000544079 C1orf64Q8NEQ6 169 aa12.13□□□□□ -0.47
CCT4-204ENST00000544079 CYP4F30PQ9H0H9 118 aa12.13□□□□□ -0.47
CCT4-204ENST00000544079 DAD1P61803 113 aa12.12□□□□□ -0.47
CCT4-204ENST00000544079 SMIM29Q86T20 159 aa12.12□□□□□ -0.47
CCT4-204ENST00000544079 PRR34Q9NV39 138 aa12.11□□□□□ -0.47
CCT4-204ENST00000544079 LYRM9A8MSI8 78 aa12.11□□□□□ -0.47
CCT4-204ENST00000544079 XAGE1AQ9HD64 81 aa12.11□□□□□ -0.47
CCT4-204ENST00000544079 IGLV5-48A0A075B6I7 105 aa12.1□□□□□ -0.47
CCT4-204ENST00000544079 FAM30AQ9NZY2 134 aa12.09□□□□□ -0.47
CCT4-204ENST00000544079 KLK12Q9UKR0 248 aa12.09□□□□□ -0.47
CCT4-204ENST00000544079 X6R8D5 127 aa12.08□□□□□ -0.48
CCT4-204ENST00000544079 ABCA12Q86UK0 2595 aa12.08□□□□□ -0.48
CCT4-204ENST00000544079 C3orf84H3BNL1 204 aa12.07□□□□□ -0.48
CCT4-204ENST00000544079 CELSR2Q9HCU4 2923 aa12.07□□□□□ -0.48
CCT4-204ENST00000544079 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
CCT4-204ENST00000544079 ETDCA0A1B0GVM5 59 aa12.07□□□□□ -0.48
CCT4-204ENST00000544079 LELP1Q5T871 98 aa12.06□□□□□ -0.48
CCT4-204ENST00000544079 TRAV22A0A0B4J277 110 aa12.05□□□□□ -0.48
CCT4-204ENST00000544079 EGFEM1PQ0D2K5 195 aa12.05□□□□□ -0.48
CCT4-204ENST00000544079 KPRPQ5T749 579 aaPredicted RBP12.04□□□□□ -0.48
CCT4-204ENST00000544079 SPG11Q96JI7 2443 aa12.04□□□□□ -0.48
CCT4-204ENST00000544079 NDUFB1O75438 58 aa12.02□□□□□ -0.49
CCT4-204ENST00000544079 Q8N377 158 aa12□□□□□ -0.49
CCT4-204ENST00000544079 MXRA5Q9NR99 2828 aa12□□□□□ -0.49
CCT4-204ENST00000544079 DNAJC9-AS1A6NH13 148 aa12□□□□□ -0.49
CCT4-204ENST00000544079 PSCAO43653 123 aa12□□□□□ -0.49
CCT4-204ENST00000544079 CD164Q04900 197 aa12□□□□□ -0.49
CCT4-204ENST00000544079 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.99□□□□□ -0.49
CCT4-204ENST00000544079 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms