RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 Q8N1X5 172 aa8.58□□□□□ -1.04
SP140-213ENST00000543928 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
SP140-213ENST00000543928 SMIM13P0DJ93 91 aa8.57□□□□□ -1.04
SP140-213ENST00000543928 FAM19A5Q7Z5A7 132 aaPredicted RBP8.57□□□□□ -1.04
SP140-213ENST00000543928 LINC00587B1AMM8 73 aa8.56□□□□□ -1.04
SP140-213ENST00000543928 SND1-IT1Q9HBX3 110 aa8.56□□□□□ -1.04
SP140-213ENST00000543928 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
SP140-213ENST00000543928 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
SP140-213ENST00000543928 A0A0J9YXY3 114 aa8.54□□□□□ -1.04
SP140-213ENST00000543928 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
SP140-213ENST00000543928 HSBP1L1C9JCN9 74 aa8.54□□□□□ -1.04
SP140-213ENST00000543928 SERTAD4-AS1Q5TG53 156 aa8.54□□□□□ -1.04
SP140-213ENST00000543928 Q5VSD8 79 aa8.54□□□□□ -1.04
SP140-213ENST00000543928 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
SP140-213ENST00000543928 MIR7-3HGQ8N6C7 128 aa8.53□□□□□ -1.04
SP140-213ENST00000543928 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
SP140-213ENST00000543928 M0QXV9 152 aa8.52□□□□□ -1.05
SP140-213ENST00000543928 JOSD1Q15040 202 aaPredicted RBP8.52□□□□□ -1.05
SP140-213ENST00000543928 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
SP140-213ENST00000543928 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
SP140-213ENST00000543928 DAND5Q8N907 189 aa8.51□□□□□ -1.05
SP140-213ENST00000543928 PLA2G2DQ9UNK4 145 aa8.51□□□□□ -1.05
SP140-213ENST00000543928 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
SP140-213ENST00000543928 RPL37AP61513 92 aaKnown RBP8.5□□□□□ -1.05
SP140-213ENST00000543928 KRTAP4-5Q9BYR2 181 aa8.5□□□□□ -1.05
SP140-213ENST00000543928 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
SP140-213ENST00000543928 ADAMTSL4-AS1Q5T5F5 129 aa8.49□□□□□ -1.05
SP140-213ENST00000543928 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
SP140-213ENST00000543928 TIMM17BO60830 172 aa8.48□□□□□ -1.05
SP140-213ENST00000543928 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
SP140-213ENST00000543928 SCGB1D4Q6XE38 83 aa8.48□□□□□ -1.05
SP140-213ENST00000543928 NKAPP1Q8N9T2 125 aa8.48□□□□□ -1.05
SP140-213ENST00000543928 LITAFQ99732 161 aa8.48□□□□□ -1.05
SP140-213ENST00000543928 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
SP140-213ENST00000543928 VPREB1P12018 145 aa8.47□□□□□ -1.05
SP140-213ENST00000543928 UBE2BP63146 152 aa8.47□□□□□ -1.05
SP140-213ENST00000543928 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
SP140-213ENST00000543928 PYY3Q5JQD4 70 aa8.47□□□□□ -1.05
SP140-213ENST00000543928 MRPL55Q7Z7F7 128 aaKnown RBP8.47□□□□□ -1.05
SP140-213ENST00000543928 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
SP140-213ENST00000543928 Q8NDZ9 215 aa8.47□□□□□ -1.05
SP140-213ENST00000543928 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
SP140-213ENST00000543928 NPC2P61916 151 aa8.46□□□□□ -1.06
SP140-213ENST00000543928 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
SP140-213ENST00000543928 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.06
SP140-213ENST00000543928 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
SP140-213ENST00000543928 PAM16Q9Y3D7 125 aa8.46□□□□□ -1.06
SP140-213ENST00000543928 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
SP140-213ENST00000543928 GAGE10A6NGK3 116 aa8.45□□□□□ -1.06
SP140-213ENST00000543928 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
SP140-213ENST00000543928 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
SP140-213ENST00000543928 LINC00167Q96N53 147 aa8.45□□□□□ -1.06
SP140-213ENST00000543928 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
SP140-213ENST00000543928 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
SP140-213ENST00000543928 SPATA45Q537H7 98 aa8.44□□□□□ -1.06
SP140-213ENST00000543928 SOSTDC1Q6X4U4 206 aa8.44□□□□□ -1.06
SP140-213ENST00000543928 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
SP140-213ENST00000543928 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
SP140-213ENST00000543928 COX8AP10176 69 aa8.43□□□□□ -1.06
SP140-213ENST00000543928 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
SP140-213ENST00000543928 M0R378 163 aa8.41□□□□□ -1.06
SP140-213ENST00000543928 NCR3O14931 201 aa8.41□□□□□ -1.06
SP140-213ENST00000543928 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
SP140-213ENST00000543928 C14orf144Q96I85 54 aa8.41□□□□□ -1.06
SP140-213ENST00000543928 SPANXDQ9BXN6 97 aa8.41□□□□□ -1.06
SP140-213ENST00000543928 SPANXCQ9NY87 97 aa8.41□□□□□ -1.06
SP140-213ENST00000543928 IGKV2-28A0A075B6P5 120 aa8.4□□□□□ -1.06
SP140-213ENST00000543928 IGKV2D-28P01615 120 aa8.4□□□□□ -1.06
SP140-213ENST00000543928 HNRNPA3P51991 378 aaKnown RBP8.4□□□□□ -1.06
SP140-213ENST00000543928 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
SP140-213ENST00000543928 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
SP140-213ENST00000543928 DLEU1O43261 78 aa8.39□□□□□ -1.07
SP140-213ENST00000543928 NDUFC2O95298 119 aa8.39□□□□□ -1.07
SP140-213ENST00000543928 INAFM2P0DMQ5 153 aa8.39□□□□□ -1.07
SP140-213ENST00000543928 Q6ZVH6 145 aa8.39□□□□□ -1.07
SP140-213ENST00000543928 SPANXB1Q9NS25 103 aaPredicted RBP8.38□□□□□ -1.07
SP140-213ENST00000543928 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
SP140-213ENST00000543928 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
SP140-213ENST00000543928 IFITM1P13164 125 aa8.37□□□□□ -1.07
SP140-213ENST00000543928 SRSF9Q13242 221 aaKnown RBP eCLIP8.37□□□□□ -1.07
SP140-213ENST00000543928 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
SP140-213ENST00000543928 COPS9Q8WXC6 57 aa8.37□□□□□ -1.07
SP140-213ENST00000543928 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
SP140-213ENST00000543928 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
SP140-213ENST00000543928 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
SP140-213ENST00000543928 S100A12P80511 92 aa8.35□□□□□ -1.07
SP140-213ENST00000543928 PPDPFQ9H3Y8 114 aa8.35□□□□□ -1.07
SP140-213ENST00000543928 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
SP140-213ENST00000543928 BCE1O60756 84 aa8.34□□□□□ -1.07
SP140-213ENST00000543928 DDTP30046 118 aa8.34□□□□□ -1.07
SP140-213ENST00000543928 S100A7L2Q5SY68 101 aa8.34□□□□□ -1.07
SP140-213ENST00000543928 REG3GQ6UW15 175 aa8.34□□□□□ -1.07
SP140-213ENST00000543928 TMEM126AQ9H061 195 aa8.34□□□□□ -1.07
SP140-213ENST00000543928 LOC105371267A0A1B0GV96 52 aa8.33□□□□□ -1.08
SP140-213ENST00000543928 PRYO14603 147 aa8.32□□□□□ -1.08
SP140-213ENST00000543928 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
SP140-213ENST00000543928 C2orf91Q6ZV80 131 aa8.32□□□□□ -1.08
SP140-213ENST00000543928 LINC00518Q8N0U6 118 aa8.32□□□□□ -1.08
SP140-213ENST00000543928 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
SP140-213ENST00000543928 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms