RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 STAB2Q8WWQ8 2551 aa9.34□□□□□ -0.91
MSH2-206ENST00000543555 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
MSH2-206ENST00000543555 NCR3O14931 201 aa9.34□□□□□ -0.91
MSH2-206ENST00000543555 INAFM2P0DMQ5 153 aa9.34□□□□□ -0.91
MSH2-206ENST00000543555 ESRGQ1W209 222 aa9.34□□□□□ -0.91
MSH2-206ENST00000543555 TGP01266 2768 aa9.33□□□□□ -0.92
MSH2-206ENST00000543555 TTC32Q5I0X7 151 aa9.33□□□□□ -0.92
MSH2-206ENST00000543555 A0A1B0GV72 72 aa9.32□□□□□ -0.92
MSH2-206ENST00000543555 C11orf45Q8TAV5 145 aa9.32□□□□□ -0.92
MSH2-206ENST00000543555 DEFB131BA0A096LNP1 70 aa9.32□□□□□ -0.92
MSH2-206ENST00000543555 GAGE2BQ13066 116 aa9.32□□□□□ -0.92
MSH2-206ENST00000543555 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
MSH2-206ENST00000543555 KRTAP26-1Q6PEX3 210 aa9.32□□□□□ -0.92
MSH2-206ENST00000543555 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
MSH2-206ENST00000543555 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
MSH2-206ENST00000543555 A0A1B0GX51 115 aa9.31□□□□□ -0.92
MSH2-206ENST00000543555 SLPIP03973 132 aa9.31□□□□□ -0.92
MSH2-206ENST00000543555 Q6Q795 121 aa9.31□□□□□ -0.92
MSH2-206ENST00000543555 PRKDCP78527 4128 aaKnown RBP9.31□□□□□ -0.92
MSH2-206ENST00000543555 S100A7L2Q5SY68 101 aa9.3□□□□□ -0.92
MSH2-206ENST00000543555 C9orf129Q5T035 196 aaKnown RBP9.3□□□□□ -0.92
MSH2-206ENST00000543555 LINC00167Q96N53 147 aa9.3□□□□□ -0.92
MSH2-206ENST00000543555 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
MSH2-206ENST00000543555 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
MSH2-206ENST00000543555 ZNF561-AS1K7EIQ3 104 aa9.29□□□□□ -0.92
MSH2-206ENST00000543555 C6orf99Q4VX62 202 aa9.29□□□□□ -0.92
MSH2-206ENST00000543555 Q8N814 137 aa9.29□□□□□ -0.92
MSH2-206ENST00000543555 HIGD2BQ4VC39 106 aa9.28□□□□□ -0.92
MSH2-206ENST00000543555 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
MSH2-206ENST00000543555 GAGE2AQ6NT46 116 aa9.27□□□□□ -0.93
MSH2-206ENST00000543555 CAMK2N2Q96S95 79 aa9.27□□□□□ -0.93
MSH2-206ENST00000543555 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
MSH2-206ENST00000543555 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
MSH2-206ENST00000543555 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
MSH2-206ENST00000543555 C15orf56Q8N910 161 aa9.26□□□□□ -0.93
MSH2-206ENST00000543555 C14orf132Q9NPU4 83 aa9.26□□□□□ -0.93
MSH2-206ENST00000543555 SDIM1Q6ZPB5 146 aa9.26□□□□□ -0.93
MSH2-206ENST00000543555 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
MSH2-206ENST00000543555 XAGE1AQ9HD64 81 aa9.26□□□□□ -0.93
MSH2-206ENST00000543555 HUWE1Q7Z6Z7 4374 aaKnown RBP9.26□□□□□ -0.93
MSH2-206ENST00000543555 TRBV7-7A0A0K0K1E9 115 aa9.24□□□□□ -0.93
MSH2-206ENST00000543555 Q6ZRU5 148 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 TENM2Q9NT68 2774 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 ANAPC13Q9BS18 74 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 FBN3Q75N90 2809 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 IGKV2D-24A0A075B6R9 120 aa9.23□□□□□ -0.93
MSH2-206ENST00000543555 NDUFV3P56181 108 aaKnown RBP9.23□□□□□ -0.93
MSH2-206ENST00000543555 TRAV10A0A0B4J240 114 aa9.22□□□□□ -0.93
MSH2-206ENST00000543555 TMEM256-PLSCR3K7ERE1 68 aa9.22□□□□□ -0.93
MSH2-206ENST00000543555 DNAH10OSP0CZ25 163 aa9.22□□□□□ -0.93
MSH2-206ENST00000543555 TRBV10-3A0A0K0K1G6 114 aa9.21□□□□□ -0.93
MSH2-206ENST00000543555 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.93
MSH2-206ENST00000543555 DNAH9Q9NYC9 4486 aa9.21□□□□□ -0.93
MSH2-206ENST00000543555 NDUFC2-KCTD14E9PQ53 114 aa9.2□□□□□ -0.94
MSH2-206ENST00000543555 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
MSH2-206ENST00000543555 hADV29S1A0JD25 119 aa9.19□□□□□ -0.94
MSH2-206ENST00000543555 JMJD7-PLA2G4BH0Y9G9 81 aa9.19□□□□□ -0.94
MSH2-206ENST00000543555 NHLRC4P0CG21 123 aaPredicted RBP9.19□□□□□ -0.94
MSH2-206ENST00000543555 VPREB1P12018 145 aa9.19□□□□□ -0.94
MSH2-206ENST00000543555 IMUPQ9GZP8 106 aa9.19□□□□□ -0.94
MSH2-206ENST00000543555 F8WDY8 70 aa9.18□□□□□ -0.94
MSH2-206ENST00000543555 CSMD3Q7Z407 3707 aa9.18□□□□□ -0.94
MSH2-206ENST00000543555 DIRC1Q969H9 104 aa9.17□□□□□ -0.94
MSH2-206ENST00000543555 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
MSH2-206ENST00000543555 LYSTQ99698 3801 aa9.17□□□□□ -0.94
MSH2-206ENST00000543555 CCKP06307 115 aa9.16□□□□□ -0.94
MSH2-206ENST00000543555 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
MSH2-206ENST00000543555 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
MSH2-206ENST00000543555 ZNF73O43830 326 aaPredicted RBP9.15□□□□□ -0.94
MSH2-206ENST00000543555 M0R378 163 aa9.15□□□□□ -0.94
MSH2-206ENST00000543555 Q6ZRP5 223 aa9.15□□□□□ -0.94
MSH2-206ENST00000543555 KRTAP21-3Q3LHN1 58 aa9.13□□□□□ -0.95
MSH2-206ENST00000543555 Q6ZQY7 126 aa9.13□□□□□ -0.95
MSH2-206ENST00000543555 COX7BP24311 80 aa9.13□□□□□ -0.95
MSH2-206ENST00000543555 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
MSH2-206ENST00000543555 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
MSH2-206ENST00000543555 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
MSH2-206ENST00000543555 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
MSH2-206ENST00000543555 Q6JHZ5 121 aa9.1□□□□□ -0.95
MSH2-206ENST00000543555 H3BQ85 93 aa9.1□□□□□ -0.95
MSH2-206ENST00000543555 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
MSH2-206ENST00000543555 RBM3P98179 157 aaKnown RBP9.09□□□□□ -0.95
MSH2-206ENST00000543555 CASC10Q5T4H9 136 aa9.09□□□□□ -0.95
MSH2-206ENST00000543555 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.09□□□□□ -0.95
MSH2-206ENST00000543555 USP17L23D6RBM5 183 aa9.08□□□□□ -0.96
MSH2-206ENST00000543555 UPK3BQ9BT76 320 aa9.08□□□□□ -0.96
MSH2-206ENST00000543555 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
MSH2-206ENST00000543555 RMI2Q96E14 147 aa9.07□□□□□ -0.96
MSH2-206ENST00000543555 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
MSH2-206ENST00000543555 B9D2Q9BPU9 175 aa9.07□□□□□ -0.96
MSH2-206ENST00000543555 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
MSH2-206ENST00000543555 CCDC179H3BU77 68 aa9.07□□□□□ -0.96
MSH2-206ENST00000543555 Q6ZQT0 140 aa9.07□□□□□ -0.96
MSH2-206ENST00000543555 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
MSH2-206ENST00000543555 LINC00528Q8N1L1 170 aa9.06□□□□□ -0.96
MSH2-206ENST00000543555 NKAPP1Q8N9T2 125 aa9.05□□□□□ -0.96
MSH2-206ENST00000543555 DNAH1Q9P2D7 4330 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms