RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 LINC00158P58513 81 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 GAGE2BQ13066 116 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 MEIG1Q5JSS6 88 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 COL5A1-AS1Q5SY13 56 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 Q6ZVH6 145 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 SNHG12Q9BXW3 62 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 SND1-IT1Q9HBX3 110 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
ABCF1-207ENST00000542772 GAGE2EQ4V326 116 aa3.7□□□□□ -1.82
ABCF1-207ENST00000542772 MIR7-3HGQ8N6C7 128 aa3.7□□□□□ -1.82
ABCF1-207ENST00000542772 SPANXDQ9BXN6 97 aa3.7□□□□□ -1.82
ABCF1-207ENST00000542772 SPANXB1Q9NS25 103 aaPredicted RBP3.7□□□□□ -1.82
ABCF1-207ENST00000542772 SPANXCQ9NY87 97 aa3.7□□□□□ -1.82
ABCF1-207ENST00000542772 HIGD1BQ9P298 99 aa3.7□□□□□ -1.82
ABCF1-207ENST00000542772 GAGE2DQ9UEU5 116 aa3.7□□□□□ -1.82
ABCF1-207ENST00000542772 IGLV5-37A0A075B6J1 123 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 A0A0U1RRA0 63 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 IFITM1P13164 125 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 RPL18AQ02543 176 aaKnown RBP3.69□□□□□ -1.82
ABCF1-207ENST00000542772 BATFQ16520 125 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 SLC25A34Q6PIV7 304 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 SOSTDC1Q6X4U4 206 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 DPH3Q96FX2 82 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 XAGE1AQ9HD64 81 aa3.69□□□□□ -1.82
ABCF1-207ENST00000542772 FAM168BA1KXE4 195 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 TMEM238C9JI98 176 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 EIF4EBP3O60516 100 aaPredicted RBP3.68□□□□□ -1.82
ABCF1-207ENST00000542772 NDUFC2O95298 119 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 VPREB1P12018 145 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
ABCF1-207ENST00000542772 SCGB1D4Q6XE38 83 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 C2orf91Q6ZV80 131 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 SCXQ7RTU7 201 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 Q8NDZ9 215 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 LINC00308Q8TCZ7 52 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 TP73-AS1Q9UF72 201 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 C22orf24Q9Y442 160 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
ABCF1-207ENST00000542772 RYR1P21817 5038 aa3.67□□□□□ -1.82
ABCF1-207ENST00000542772 TAL2Q16559 108 aa3.67□□□□□ -1.82
ABCF1-207ENST00000542772 SERTAD4-AS1Q5TG53 156 aa3.67□□□□□ -1.82
ABCF1-207ENST00000542772 MUSTN1Q8IVN3 82 aa3.67□□□□□ -1.82
ABCF1-207ENST00000542772 DAND5Q8N907 189 aa3.67□□□□□ -1.82
ABCF1-207ENST00000542772 TRBV10-2A0A0K0K1G8 114 aa3.66□□□□□ -1.82
ABCF1-207ENST00000542772 SRSF9Q13242 221 aaKnown RBP eCLIP3.66□□□□□ -1.82
ABCF1-207ENST00000542772 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
ABCF1-207ENST00000542772 LINC00167Q96N53 147 aa3.66□□□□□ -1.82
ABCF1-207ENST00000542772 FAT1Q14517 4588 aa3.65□□□□□ -1.82
ABCF1-207ENST00000542772 HSPG2P98160 4391 aa3.65□□□□□ -1.82
ABCF1-207ENST00000542772 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
ABCF1-207ENST00000542772 IGLV1-50A0A075B6I6 118 aa3.65□□□□□ -1.83
ABCF1-207ENST00000542772 M0R378 163 aa3.65□□□□□ -1.83
ABCF1-207ENST00000542772 HINT1P49773 126 aaPredicted RBP3.65□□□□□ -1.83
ABCF1-207ENST00000542772 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.83
ABCF1-207ENST00000542772 PHF5AQ7RTV0 110 aaKnown RBP3.65□□□□□ -1.83
ABCF1-207ENST00000542772 MRPL55Q7Z7F7 128 aaKnown RBP3.65□□□□□ -1.83
ABCF1-207ENST00000542772 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
ABCF1-207ENST00000542772 KRTAP17-1Q9BYP8 105 aa3.65□□□□□ -1.83
ABCF1-207ENST00000542772 IGKV2-28A0A075B6P5 120 aa3.64□□□□□ -1.83
ABCF1-207ENST00000542772 A6NDN8 102 aa3.64□□□□□ -1.83
ABCF1-207ENST00000542772 M0QXV9 152 aa3.64□□□□□ -1.83
ABCF1-207ENST00000542772 IGKV2D-28P01615 120 aa3.64□□□□□ -1.83
ABCF1-207ENST00000542772 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
ABCF1-207ENST00000542772 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
ABCF1-207ENST00000542772 A4D1N5 150 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 IGLV6-57P01721 117 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 SMR3BP02814 79 aaPredicted RBP3.63□□□□□ -1.83
ABCF1-207ENST00000542772 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
ABCF1-207ENST00000542772 NPC2P61916 151 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 HAMPP81172 84 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 CEND1Q8N111 149 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 Q8N1X5 172 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 NKAPP1Q8N9T2 125 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 HIST1H4GQ99525 98 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 KCNQ1DNQ9H478 68 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 VPS13BQ7Z7G8 4022 aa3.63□□□□□ -1.83
ABCF1-207ENST00000542772 KRTAP4-16G5E9R7 235 aaPredicted RBP3.62□□□□□ -1.83
ABCF1-207ENST00000542772 FAM229AH3BQW9 127 aa3.62□□□□□ -1.83
ABCF1-207ENST00000542772 SPRR1AP35321 89 aa3.62□□□□□ -1.83
ABCF1-207ENST00000542772 HSD52Q0P140 79 aa3.62□□□□□ -1.83
ABCF1-207ENST00000542772 BVES-AS1Q5T3Y7 98 aa3.62□□□□□ -1.83
ABCF1-207ENST00000542772 TMEM126AQ9H061 195 aa3.62□□□□□ -1.83
ABCF1-207ENST00000542772 PSORS1C2Q9UIG4 136 aa3.62□□□□□ -1.83
ABCF1-207ENST00000542772 HERC2O95714 4834 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 TRAV13-2A0A0B4J235 113 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 TRBV10-3A0A0K0K1G6 114 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 CFC1BP0CG36 223 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 CFC1P0CG37 223 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 LINC00528Q8N1L1 170 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 LINC00337Q8N6G1 96 aa3.61□□□□□ -1.83
ABCF1-207ENST00000542772 A0A0B4J2C4 111 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 A0A1B0GWB2 263 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 GAGE10A6NGK3 116 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 H0Y9J4 135 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 NCR3O14931 201 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 PLA2G1BP04054 148 aaKnown RBP3.6□□□□□ -1.83
ABCF1-207ENST00000542772 FXYD2P54710 66 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms