RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 IGKV2D-26A0A0A0MRZ7 120 aa8.97□□□□□ -0.97
CD4-210ENST00000541982 LINC01547P58512 204 aaPredicted RBP8.97□□□□□ -0.97
CD4-210ENST00000541982 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
CD4-210ENST00000541982 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
CD4-210ENST00000541982 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.98
CD4-210ENST00000541982 CRCT1Q9UGL9 99 aa8.96□□□□□ -0.98
CD4-210ENST00000541982 C11orf86A6NJI1 115 aa8.95□□□□□ -0.98
CD4-210ENST00000541982 PRLHP81277 87 aa8.95□□□□□ -0.98
CD4-210ENST00000541982 FAM19A1Q7Z5A9 133 aa8.95□□□□□ -0.98
CD4-210ENST00000541982 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
CD4-210ENST00000541982 M0R378 163 aa8.94□□□□□ -0.98
CD4-210ENST00000541982 PMCHL1Q16048 86 aa8.94□□□□□ -0.98
CD4-210ENST00000541982 TMEM170BQ5T4T1 132 aa8.94□□□□□ -0.98
CD4-210ENST00000541982 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
CD4-210ENST00000541982 Q8NDZ9 215 aa8.92□□□□□ -0.98
CD4-210ENST00000541982 PLEKHB2Q96CS7 222 aa8.91□□□□□ -0.98
CD4-210ENST00000541982 CHTOPQ9Y3Y2 248 aaKnown RBP8.91□□□□□ -0.98
CD4-210ENST00000541982 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
CD4-210ENST00000541982 LINC00337Q8N6G1 96 aa8.9□□□□□ -0.98
CD4-210ENST00000541982 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
CD4-210ENST00000541982 LINC00158P58513 81 aa8.89□□□□□ -0.99
CD4-210ENST00000541982 SPAG11AQ6PDA7 123 aa8.89□□□□□ -0.99
CD4-210ENST00000541982 FP248Q71RG6 208 aaPredicted RBP8.89□□□□□ -0.99
CD4-210ENST00000541982 TMEM223A0PJW6 202 aa8.88□□□□□ -0.99
CD4-210ENST00000541982 SNAPINO95295 136 aa8.88□□□□□ -0.99
CD4-210ENST00000541982 APOC3P02656 99 aa8.88□□□□□ -0.99
CD4-210ENST00000541982 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
CD4-210ENST00000541982 CHCHD1Q96BP2 118 aaKnown RBP8.87□□□□□ -0.99
CD4-210ENST00000541982 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
CD4-210ENST00000541982 NDUFA5Q16718 116 aa8.86□□□□□ -0.99
CD4-210ENST00000541982 SVBPQ8N300 66 aa8.86□□□□□ -0.99
CD4-210ENST00000541982 IFI27L1Q96BM0 104 aa8.86□□□□□ -0.99
CD4-210ENST00000541982 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
CD4-210ENST00000541982 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
CD4-210ENST00000541982 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
CD4-210ENST00000541982 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
CD4-210ENST00000541982 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
CD4-210ENST00000541982 SPRR4Q96PI1 79 aa8.84□□□□□ -0.99
CD4-210ENST00000541982 PRYO14603 147 aa8.83□□□□□ -1
CD4-210ENST00000541982 SMIM13P0DJ93 91 aa8.83□□□□□ -1
CD4-210ENST00000541982 HERV-K104P63124 156 aa8.83□□□□□ -1
CD4-210ENST00000541982 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
CD4-210ENST00000541982 ZNF706Q9Y5V0 76 aaPredicted RBP8.83□□□□□ -1
CD4-210ENST00000541982 LINC00587B1AMM8 73 aa8.82□□□□□ -1
CD4-210ENST00000541982 MEIG1Q5JSS6 88 aa8.82□□□□□ -1
CD4-210ENST00000541982 BOD1L2Q8IYS8 172 aa8.82□□□□□ -1
CD4-210ENST00000541982 YPEL4Q96NS1 127 aa8.82□□□□□ -1
CD4-210ENST00000541982 SPRR1AP35321 89 aa8.81□□□□□ -1
CD4-210ENST00000541982 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
CD4-210ENST00000541982 MIR7-3HGQ8N6C7 128 aa8.81□□□□□ -1
CD4-210ENST00000541982 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
CD4-210ENST00000541982 HSBP1O75506 76 aa8.79□□□□□ -1
CD4-210ENST00000541982 MAP1LC3CQ9BXW4 147 aa8.79□□□□□ -1
CD4-210ENST00000541982 NDUFA12Q9UI09 145 aa8.79□□□□□ -1
CD4-210ENST00000541982 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
CD4-210ENST00000541982 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
CD4-210ENST00000541982 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
CD4-210ENST00000541982 NCR3O14931 201 aa8.77□□□□□ -1.01
CD4-210ENST00000541982 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1.01
CD4-210ENST00000541982 SMCR5Q8TEV8 140 aa8.77□□□□□ -1.01
CD4-210ENST00000541982 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
CD4-210ENST00000541982 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
CD4-210ENST00000541982 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
CD4-210ENST00000541982 S100A12P80511 92 aa8.76□□□□□ -1.01
CD4-210ENST00000541982 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
CD4-210ENST00000541982 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
CD4-210ENST00000541982 Q8NBF4 154 aa8.74□□□□□ -1.01
CD4-210ENST00000541982 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
CD4-210ENST00000541982 LEPROTO15243 131 aa8.73□□□□□ -1.01
CD4-210ENST00000541982 LEPROTL1O95214 131 aa8.73□□□□□ -1.01
CD4-210ENST00000541982 SPINK1P00995 79 aa8.73□□□□□ -1.01
CD4-210ENST00000541982 DAND5Q8N907 189 aa8.73□□□□□ -1.01
CD4-210ENST00000541982 B5MCH6 92 aa8.71□□□□□ -1.02
CD4-210ENST00000541982 H0Y8G0 127 aa8.71□□□□□ -1.02
CD4-210ENST00000541982 TSPEAR-AS2P59090 65 aa8.71□□□□□ -1.02
CD4-210ENST00000541982 PLNP26678 52 aa8.7□□□□□ -1.02
CD4-210ENST00000541982 DDTP30046 118 aa8.7□□□□□ -1.02
CD4-210ENST00000541982 J3QQQ9 107 aa8.69□□□□□ -1.02
CD4-210ENST00000541982 TRGC2P03986 189 aa8.69□□□□□ -1.02
CD4-210ENST00000541982 NMUP48645 174 aa8.69□□□□□ -1.02
CD4-210ENST00000541982 LINC00310P59036 64 aa8.69□□□□□ -1.02
CD4-210ENST00000541982 GAGE2AQ6NT46 116 aa8.69□□□□□ -1.02
CD4-210ENST00000541982 SERF1AO75920 110 aa8.68□□□□□ -1.02
CD4-210ENST00000541982 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
CD4-210ENST00000541982 HERVK_113P61574 105 aa8.68□□□□□ -1.02
CD4-210ENST00000541982 RPS29P62273 56 aaKnown RBP8.68□□□□□ -1.02
CD4-210ENST00000541982 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
CD4-210ENST00000541982 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
CD4-210ENST00000541982 HSPB8Q9UJY1 196 aa8.68□□□□□ -1.02
CD4-210ENST00000541982 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
CD4-210ENST00000541982 DPM2O94777 84 aa8.67□□□□□ -1.02
CD4-210ENST00000541982 NDUFC2O95298 119 aa8.67□□□□□ -1.02
CD4-210ENST00000541982 Q6ZRX8 168 aa8.67□□□□□ -1.02
CD4-210ENST00000541982 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
CD4-210ENST00000541982 Q9BRP9 147 aa8.66□□□□□ -1.02
CD4-210ENST00000541982 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
CD4-210ENST00000541982 IGKCP01834 107 aa8.65□□□□□ -1.02
CD4-210ENST00000541982 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
CD4-210ENST00000541982 MOBPQ13875 183 aa8.65□□□□□ -1.02
CD4-210ENST00000541982 S100A7L2Q5SY68 101 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms