RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 LOC107984156A0A0G2JMH3 177 aa18.09■□□□□ 0.49
CCM2-218ENST00000541586 ARL17AQ8IVW1 177 aa18.09■□□□□ 0.49
CCM2-218ENST00000541586 CARD19Q96LW7 228 aa18.08■□□□□ 0.48
CCM2-218ENST00000541586 H3BUT2 72 aa18.07■□□□□ 0.48
CCM2-218ENST00000541586 PGPEP1Q9NXJ5 209 aa18.07■□□□□ 0.48
CCM2-218ENST00000541586 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.03■□□□□ 0.48
CCM2-218ENST00000541586 TSPAN13O95857 204 aa18.03■□□□□ 0.48
CCM2-218ENST00000541586 FUSP35637 526 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCM2-218ENST00000541586 RNF151Q2KHN1 245 aa18.03■□□□□ 0.48
CCM2-218ENST00000541586 Q8N814 137 aa18.03■□□□□ 0.48
CCM2-218ENST00000541586 DNAH11Q96DT5 4516 aa18.03■□□□□ 0.48
CCM2-218ENST00000541586 NDUFC2-KCTD14E9PQ53 114 aa18.03■□□□□ 0.48
CCM2-218ENST00000541586 PKD1P98161 4303 aa18.02■□□□□ 0.47
CCM2-218ENST00000541586 IGKV2-28A0A075B6P5 120 aa18.01■□□□□ 0.47
CCM2-218ENST00000541586 IGKV2D-28P01615 120 aa18.01■□□□□ 0.47
CCM2-218ENST00000541586 C14orf177Q52M58 125 aa18.01■□□□□ 0.47
CCM2-218ENST00000541586 H7C2G1 150 aa17.99■□□□□ 0.47
CCM2-218ENST00000541586 XAGE1AQ9HD64 81 aa17.99■□□□□ 0.47
CCM2-218ENST00000541586 Q6ZRP5 223 aa17.98■□□□□ 0.47
CCM2-218ENST00000541586 A0A1B0GVY2 172 aa17.98■□□□□ 0.47
CCM2-218ENST00000541586 A0A1W2PPM0 123 aa17.98■□□□□ 0.47
CCM2-218ENST00000541586 RPL13AP40429 203 aaKnown RBP17.98■□□□□ 0.47
CCM2-218ENST00000541586 KRTAP10-2P60368 255 aa17.98■□□□□ 0.47
CCM2-218ENST00000541586 NDUFC2O95298 119 aa17.96■□□□□ 0.47
CCM2-218ENST00000541586 LINC00337Q8N6G1 96 aa17.96■□□□□ 0.47
CCM2-218ENST00000541586 Q8NDZ9 215 aa17.96■□□□□ 0.47
CCM2-218ENST00000541586 TLX1NBP0CAT3 122 aa17.95■□□□□ 0.46
CCM2-218ENST00000541586 CNBPP62633 177 aaKnown RBP17.95■□□□□ 0.46
CCM2-218ENST00000541586 GAGE2EQ4V326 116 aa17.95■□□□□ 0.46
CCM2-218ENST00000541586 GAGE2DQ9UEU5 116 aa17.95■□□□□ 0.46
CCM2-218ENST00000541586 TRAV13-2A0A0B4J235 113 aa17.94■□□□□ 0.46
CCM2-218ENST00000541586 VAMP3Q15836 100 aa17.94■□□□□ 0.46
CCM2-218ENST00000541586 Q1RN00 199 aa17.94■□□□□ 0.46
CCM2-218ENST00000541586 HECTD4Q9Y4D8 3996 aa17.94■□□□□ 0.46
CCM2-218ENST00000541586 PRR3P79522 188 aaKnown RBP17.93■□□□□ 0.46
CCM2-218ENST00000541586 FABP2P12104 132 aa17.92■□□□□ 0.46
CCM2-218ENST00000541586 RPL18AQ02543 176 aaKnown RBP17.92■□□□□ 0.46
CCM2-218ENST00000541586 IGLV5-52A0A0A0MRZ9 124 aa17.9■□□□□ 0.46
CCM2-218ENST00000541586 PSMB2P49721 201 aa17.87■□□□□ 0.45
CCM2-218ENST00000541586 C9orf129Q5T035 196 aaKnown RBP17.87■□□□□ 0.45
CCM2-218ENST00000541586 DNAH5Q8TE73 4624 aa17.87■□□□□ 0.45
CCM2-218ENST00000541586 PKHD1P08F94 4074 aa17.87■□□□□ 0.45
CCM2-218ENST00000541586 LOC107984640A0A0U1RRK4 108 aa17.86■□□□□ 0.45
CCM2-218ENST00000541586 NCR3O14931 201 aa17.86■□□□□ 0.45
CCM2-218ENST00000541586 OR13C6PQ8NH95 151 aa17.85■□□□□ 0.45
CCM2-218ENST00000541586 SPCS1Q9Y6A9 102 aa17.85■□□□□ 0.45
CCM2-218ENST00000541586 TRIAP1O43715 76 aa17.84■□□□□ 0.45
CCM2-218ENST00000541586 LINC01620Q4KN68 170 aa17.84■□□□□ 0.45
CCM2-218ENST00000541586 EPPK1P58107 5090 aaKnown RBP17.83■□□□□ 0.45
CCM2-218ENST00000541586 GAGE2BQ13066 116 aa17.83■□□□□ 0.44
CCM2-218ENST00000541586 C16orf90A8MZG2 172 aa17.82■□□□□ 0.44
CCM2-218ENST00000541586 VPREB1P12018 145 aa17.82■□□□□ 0.44
CCM2-218ENST00000541586 GAGE10A6NGK3 116 aa17.81■□□□□ 0.44
CCM2-218ENST00000541586 K7EP34 96 aa17.81■□□□□ 0.44
CCM2-218ENST00000541586 SCGB1C2P0DMR2 95 aa17.81■□□□□ 0.44
CCM2-218ENST00000541586 TRBV10-2A0A0K0K1G8 114 aa17.8■□□□□ 0.44
CCM2-218ENST00000541586 LYRM7Q5U5X0 104 aa17.79■□□□□ 0.44
CCM2-218ENST00000541586 UBE2V1Q13404 147 aa17.78■□□□□ 0.44
CCM2-218ENST00000541586 C9orf163Q8N9P6 203 aa17.78■□□□□ 0.44
CCM2-218ENST00000541586 GTF2H5Q6ZYL4 71 aa17.78■□□□□ 0.44
CCM2-218ENST00000541586 SMIM11BQ8TCY0 68 aa17.78■□□□□ 0.44
CCM2-218ENST00000541586 TMEM126AQ9H061 195 aa17.78■□□□□ 0.44
CCM2-218ENST00000541586 RPL28P46779 137 aaKnown RBP17.76■□□□□ 0.43
CCM2-218ENST00000541586 S100A7L2Q5SY68 101 aa17.76■□□□□ 0.43
CCM2-218ENST00000541586 COX6CP09669 75 aa17.75■□□□□ 0.43
CCM2-218ENST00000541586 SERTAD4-AS1Q5TG53 156 aa17.75■□□□□ 0.43
CCM2-218ENST00000541586 PLA2G2DQ9UNK4 145 aa17.75■□□□□ 0.43
CCM2-218ENST00000541586 A0A096LNI7 61 aa17.74■□□□□ 0.43
CCM2-218ENST00000541586 IGLV6-57P01721 117 aa17.73■□□□□ 0.43
CCM2-218ENST00000541586 FAM168BA1KXE4 195 aa17.72■□□□□ 0.43
CCM2-218ENST00000541586 TCL1BO95988 128 aa17.72■□□□□ 0.43
CCM2-218ENST00000541586 M0R378 163 aa17.72■□□□□ 0.43
CCM2-218ENST00000541586 KRTAP10-1P60331 282 aa17.71■□□□□ 0.43
CCM2-218ENST00000541586 LRP1BQ9NZR2 4599 aa17.71■□□□□ 0.43
CCM2-218ENST00000541586 DYNC1H1Q14204 4646 aaKnown RBP17.7■□□□□ 0.42
CCM2-218ENST00000541586 TRBV20-1A0A075B6N2 111 aa17.7■□□□□ 0.42
CCM2-218ENST00000541586 IGKV2-24A0A0C4DH68 120 aa17.7■□□□□ 0.42
CCM2-218ENST00000541586 TRBV10-3A0A0K0K1G6 114 aa17.69■□□□□ 0.42
CCM2-218ENST00000541586 H3BMG7 143 aa17.69■□□□□ 0.42
CCM2-218ENST00000541586 NKAPP1Q8N9T2 125 aa17.69■□□□□ 0.42
CCM2-218ENST00000541586 SDIM1Q6ZPB5 146 aa17.68■□□□□ 0.42
CCM2-218ENST00000541586 KRTAP7-1Q8IUC3 87 aa17.68■□□□□ 0.42
CCM2-218ENST00000541586 PKIGQ9Y2B9 76 aa17.68■□□□□ 0.42
CCM2-218ENST00000541586 CLEC2BQ92478 149 aa17.67■□□□□ 0.42
CCM2-218ENST00000541586 IGLV5-37A0A075B6J1 123 aa17.67■□□□□ 0.42
CCM2-218ENST00000541586 FAM19A5Q7Z5A7 132 aaPredicted RBP17.65■□□□□ 0.42
CCM2-218ENST00000541586 CHTF8P0CG12 524 aa17.64■□□□□ 0.41
CCM2-218ENST00000541586 C7orf33Q8WU49 177 aa17.63■□□□□ 0.41
CCM2-218ENST00000541586 ATXN8Q156A1 80 aa17.62■□□□□ 0.41
CCM2-218ENST00000541586 C22orf24Q9Y442 160 aa17.61■□□□□ 0.41
CCM2-218ENST00000541586 TRAV23DV6A0A075B6W5 121 aa17.6■□□□□ 0.41
CCM2-218ENST00000541586 C6orf99Q4VX62 202 aa17.6■□□□□ 0.41
CCM2-218ENST00000541586 FAM30AQ9NZY2 134 aa17.6■□□□□ 0.41
CCM2-218ENST00000541586 A0A1W2PNN7 141 aa17.59■□□□□ 0.41
CCM2-218ENST00000541586 LST1O00453 97 aa17.59■□□□□ 0.41
CCM2-218ENST00000541586 DPH3Q96FX2 82 aa17.58■□□□□ 0.41
CCM2-218ENST00000541586 H0YGX0 51 aa17.58■□□□□ 0.4
CCM2-218ENST00000541586 FAM218AQ96MZ4 157 aa17.58■□□□□ 0.4
CCM2-218ENST00000541586 LINC00474Q9P2X8 69 aa17.57■□□□□ 0.4
CCM2-218ENST00000541586 MRPL55Q7Z7F7 128 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms