RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SMAGPQ0VAQ4 97 aa5.34□□□□□ -1.55
YBX3-211ENST00000541351 KIAA1644Q3SXP7 199 aa5.34□□□□□ -1.55
YBX3-211ENST00000541351 BCE1O60756 84 aa5.33□□□□□ -1.56
YBX3-211ENST00000541351 LEPROTL1O95214 131 aa5.33□□□□□ -1.56
YBX3-211ENST00000541351 HSD52Q0P140 79 aa5.33□□□□□ -1.56
YBX3-211ENST00000541351 CT83Q5H943 113 aa5.33□□□□□ -1.56
YBX3-211ENST00000541351 LINC00242Q5T6M2 205 aa5.33□□□□□ -1.56
YBX3-211ENST00000541351 A0A1B0GXF2 115 aa5.32□□□□□ -1.56
YBX3-211ENST00000541351 LTAP01374 205 aa5.32□□□□□ -1.56
YBX3-211ENST00000541351 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
YBX3-211ENST00000541351 LINC01545Q5VT33 79 aa5.32□□□□□ -1.56
YBX3-211ENST00000541351 COX6B2Q6YFQ2 88 aa5.32□□□□□ -1.56
YBX3-211ENST00000541351 MRAP2Q96G30 205 aa5.32□□□□□ -1.56
YBX3-211ENST00000541351 FABP2P12104 132 aa5.31□□□□□ -1.56
YBX3-211ENST00000541351 HBBP68871 147 aa5.31□□□□□ -1.56
YBX3-211ENST00000541351 XP32Q5T750 250 aa5.31□□□□□ -1.56
YBX3-211ENST00000541351 C2orf91Q6ZV80 131 aa5.31□□□□□ -1.56
YBX3-211ENST00000541351 RNASE7Q9H1E1 156 aaKnown RBP5.31□□□□□ -1.56
YBX3-211ENST00000541351 ANAPC11Q9NYG5 84 aa5.31□□□□□ -1.56
YBX3-211ENST00000541351 A0A1W2PPM0 123 aa5.3□□□□□ -1.56
YBX3-211ENST00000541351 TPPP3Q9BW30 176 aa5.3□□□□□ -1.56
YBX3-211ENST00000541351 CDC42SE2Q9NRR3 84 aa5.3□□□□□ -1.56
YBX3-211ENST00000541351 SPCS1Q9Y6A9 102 aa5.3□□□□□ -1.56
YBX3-211ENST00000541351 UBE2AP49459 152 aa5.29□□□□□ -1.56
YBX3-211ENST00000541351 C5orf38Q86SI9 138 aa5.29□□□□□ -1.56
YBX3-211ENST00000541351 BOD1L2Q8IYS8 172 aa5.29□□□□□ -1.56
YBX3-211ENST00000541351 URB1-AS1Q96HZ7 61 aa5.29□□□□□ -1.56
YBX3-211ENST00000541351 IGLV8-61A0A075B6I0 122 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 TRBV30A0A0K0K1B3 111 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 A0A1B0GW15 77 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 A8MWL6 223 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 NDUFC2-KCTD14E9PQ53 114 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 F8W1H4 67 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 H3BUT2 72 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 I3L3M4 83 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 SMCPP49901 116 aaPredicted RBP5.28□□□□□ -1.56
YBX3-211ENST00000541351 CKS1BP61024 79 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 ERASQ7Z444 233 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 GATD1Q8NB37 220 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 HIGD1BQ9P298 99 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 TP73-AS1Q9UF72 201 aa5.28□□□□□ -1.56
YBX3-211ENST00000541351 SMIM13P0DJ93 91 aa5.27□□□□□ -1.57
YBX3-211ENST00000541351 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
YBX3-211ENST00000541351 VCX2Q9H322 139 aa5.27□□□□□ -1.57
YBX3-211ENST00000541351 C22orf24Q9Y442 160 aa5.27□□□□□ -1.57
YBX3-211ENST00000541351 SDHAF1A6NFY7 115 aa5.26□□□□□ -1.57
YBX3-211ENST00000541351 HIGD1CA8MV81 97 aa5.26□□□□□ -1.57
YBX3-211ENST00000541351 SPINK1P00995 79 aa5.26□□□□□ -1.57
YBX3-211ENST00000541351 RPL24P83731 157 aaKnown RBP5.26□□□□□ -1.57
YBX3-211ENST00000541351 C6orf48Q9UBA6 75 aa5.26□□□□□ -1.57
YBX3-211ENST00000541351 TRAV13-1A0A0B4J241 112 aa5.25□□□□□ -1.57
YBX3-211ENST00000541351 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
YBX3-211ENST00000541351 SPANXB1Q9NS25 103 aaPredicted RBP5.25□□□□□ -1.57
YBX3-211ENST00000541351 SPANXA1Q9NS26 97 aa5.25□□□□□ -1.57
YBX3-211ENST00000541351 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
YBX3-211ENST00000541351 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
YBX3-211ENST00000541351 FOXA3P55318 350 aaPredicted RBP5.24□□□□□ -1.57
YBX3-211ENST00000541351 RIGQ13278 110 aa5.24□□□□□ -1.57
YBX3-211ENST00000541351 TAL2Q16559 108 aa5.24□□□□□ -1.57
YBX3-211ENST00000541351 C9orf129Q5T035 196 aaKnown RBP5.24□□□□□ -1.57
YBX3-211ENST00000541351 UNQ6190/PRO20217Q6UXQ8 127 aa5.24□□□□□ -1.57
YBX3-211ENST00000541351 CSDC2Q9Y534 153 aaKnown RBP5.24□□□□□ -1.57
YBX3-211ENST00000541351 E9PLD3 99 aa5.23□□□□□ -1.57
YBX3-211ENST00000541351 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
YBX3-211ENST00000541351 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
YBX3-211ENST00000541351 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
YBX3-211ENST00000541351 CYSLTR1Q9Y271 337 aa5.23□□□□□ -1.57
YBX3-211ENST00000541351 IGLC6P0CF74 106 aa5.22□□□□□ -1.57
YBX3-211ENST00000541351 PCOTHQ58A44 107 aa5.22□□□□□ -1.57
YBX3-211ENST00000541351 LYZL1Q6UWQ5 148 aa5.22□□□□□ -1.57
YBX3-211ENST00000541351 H0Y8G0 127 aa5.21□□□□□ -1.58
YBX3-211ENST00000541351 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
YBX3-211ENST00000541351 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
YBX3-211ENST00000541351 USH2AO75445 5202 aa5.2□□□□□ -1.58
YBX3-211ENST00000541351 A0A1B0GUT8 65 aa5.2□□□□□ -1.58
YBX3-211ENST00000541351 KRTAP4-16G5E9R7 235 aaPredicted RBP5.2□□□□□ -1.58
YBX3-211ENST00000541351 HBDP02042 147 aa5.2□□□□□ -1.58
YBX3-211ENST00000541351 TWIST1Q15672 202 aa5.2□□□□□ -1.58
YBX3-211ENST00000541351 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
YBX3-211ENST00000541351 RAB37Q96AX2 223 aa5.2□□□□□ -1.58
YBX3-211ENST00000541351 ERG28Q9UKR5 140 aa5.2□□□□□ -1.58
YBX3-211ENST00000541351 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
YBX3-211ENST00000541351 LYRM7Q5U5X0 104 aa5.19□□□□□ -1.58
YBX3-211ENST00000541351 C3orf22Q8N5N4 141 aa5.19□□□□□ -1.58
YBX3-211ENST00000541351 RPL39LQ96EH5 51 aaKnown RBP5.19□□□□□ -1.58
YBX3-211ENST00000541351 TRBV6-5A0A0K0K1A5 114 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 A0A1B0GWB2 263 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 LINC01546A6NGU7 62 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 H3BMG7 143 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 SLC25A20O43772 301 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 FCER1GP30273 86 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 CEND1Q8N111 149 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 IFI27L1Q96BM0 104 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 PRO0461Q9UI25 63 aa5.18□□□□□ -1.58
YBX3-211ENST00000541351 IGHV3OR16-9A0A0B4J2B5 98 aa5.17□□□□□ -1.58
YBX3-211ENST00000541351 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
YBX3-211ENST00000541351 ATP5LO75964 103 aa5.17□□□□□ -1.58
YBX3-211ENST00000541351 SPINK8P0C7L1 97 aa5.17□□□□□ -1.58
YBX3-211ENST00000541351 FXYD2P54710 66 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms