RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	OTOG	Q6ZRI0	2925 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	IGLV4-60	A0A075B6I1	120 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	LY6G6C	O95867	125 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	TRAV23DV6	A0A075B6W5	121 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	C4orf26	Q17RF5	130 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	C5orf47	Q569G3	176 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	SERP2	Q8N6R1	65 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	DPH3	Q96FX2	82 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		H3BNG1	76 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	FAM19A1	Q7Z5A9	133 aa		3.93	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	SS18	Q15532	418 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		Q6ZTC4	211 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	C14orf177	Q52M58	125 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	CLPSL2	Q6UWE3	100 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		X6R8D5	127 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	NBEAL2	Q6ZNJ1	2754 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		Q6JHZ5	121 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	HRCT1	Q6UXD1	115 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		Q8NAQ8	132 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	UPK3B	Q9BT76	320 aa		3.92	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	C1orf43	Q9BWL3	253 aa		3.91	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		H0YGX0	51 aa		3.91	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	C6orf226	Q5I0X4	101 aa		3.91	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	ENHO	Q6UWT2	76 aa		3.91	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	GHRH	P01286	108 aa		3.91	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	XCL1	P47992	114 aa		3.91	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	FHL2	Q14192	279 aa		3.91	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	PDZD2	O15018	2839 aa		3.9	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	LELP1	Q5T871	98 aa		3.9	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	ORMDL1	Q9P0S3	153 aa		3.9	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		A0A096LPF7	62 aa		3.9	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	ANG	P03950	147 aa	Known RBP	3.9	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	FAM19A3	Q7Z5A8	133 aa		3.9	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	C20orf197	Q8N268	126 aa		3.9	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.89	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	TMEM258	P61165	79 aa		3.89	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	OBSCN-AS1	Q96MR7	158 aa		3.89	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	RPS28	P62857	69 aa	Known RBP	3.89	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	CCK	P06307	115 aa		3.89	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	CSNK1G2-AS1	Q8NCQ2	148 aa		3.89	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	IBA57-AS1	B1ANH7	110 aa		3.88	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	IGKV2D-24	A0A075B6R9	120 aa		3.88	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	C9orf116	Q5BN46	136 aa	Predicted RBP	3.88	□□□□□ -1.79
RAPGEF4-215	ENST00000540783		M0R2N4	97 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783		A0A087WZ39	114 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	TRBV6-8	A0A0A6YYG3	113 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	LINC00959	A0A1B0GUT2	108 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	IGLV10-54	A0A075B6I4	117 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783		Q5XG85	94 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783		Q8N814	137 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	CELA1	Q9UNI1	258 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	GIG44	P09565	113 aa	Predicted RBP	3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	HAMP	P81172	84 aa		3.87	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	ZNF561-AS1	K7EIQ3	104 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	C6orf99	Q4VX62	202 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	C1orf134	Q5TEV5	83 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	SNURF	Q9Y675	71 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	PLAC8L1	A1L4L8	177 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783		Q8N3U1	123 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783		Q8NDZ9	215 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	UBL5	Q9BZL1	73 aa		3.86	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	SCX	Q7RTU7	201 aa		3.85	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	LINC00269	Q8N2A0	174 aa		3.85	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	LAMTOR3	Q9UHA4	124 aa		3.85	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	KLK12	Q9UKR0	248 aa		3.85	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.85	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	TMEM256-PLSCR3	K7ERE1	68 aa		3.85	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	LINC00612	Q8N6U2	182 aa		3.85	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	S100A7L2	Q5SY68	101 aa		3.84	□□□□□ -1.79
RAPGEF4-215	ENST00000540783	FAM236D	A0A1B0GTK5	79 aa		3.84	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	FAM236C	P0DP71	79 aa		3.84	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LYPD5	Q6UWN5	251 aa		3.83	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	RBM3	P98179	157 aa	Known RBP	3.83	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	NDUFC2	O95298	119 aa		3.83	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	C6orf223	Q8N319	242 aa		3.83	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		H7BZZ5	65 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LINC01547	P58512	204 aa	Predicted RBP	3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LINC01556	Q5JQF7	62 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LINC00336	Q6ZUF6	198 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LINC00167	Q96N53	147 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	REG3A	Q06141	175 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	CASC10	Q5T4H9	136 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	C10orf25	Q5T742	122 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		Q8IZM0	81 aa		3.82	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	ATP5EP2	Q5VTU8	51 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		Q6ZQT0	140 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		Q6ZQY7	126 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		Q6ZVQ6	151 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	NBDY	A0A0U1RRE5	68 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	KIAA0087	Q14695	138 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LINC00575	Q6W349	94 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		F8WEM9	126 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	APLN	Q9ULZ1	77 aa		3.81	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LINC00474	Q9P2X8	69 aa		3.8	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	ESRG	Q1W209	222 aa		3.8	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	ANK3	Q12955	4377 aa	Known RBP	3.8	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	TRAV7	A0A075B6U4	112 aa		3.8	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		Q8N9L7	120 aa		3.8	□□□□□ -1.8

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