RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
DDX55-206ENST00000539934 SORL1Q92673 2214 aa8.84□□□□□ -0.99
DDX55-206ENST00000539934 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
DDX55-206ENST00000539934 C16orf90A8MZG2 172 aa8.84□□□□□ -0.99
DDX55-206ENST00000539934 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
DDX55-206ENST00000539934 SPANXN1Q5VSR9 72 aa8.84□□□□□ -0.99
DDX55-206ENST00000539934 TMEM141Q96I45 108 aa8.84□□□□□ -0.99
DDX55-206ENST00000539934 KPRPQ5T749 579 aaPredicted RBP8.83□□□□□ -1
DDX55-206ENST00000539934 TRAV12-3A0A0B4J271 114 aa8.82□□□□□ -1
DDX55-206ENST00000539934 DEFB131AP59861 70 aa8.82□□□□□ -1
DDX55-206ENST00000539934 DEFB114Q30KQ6 69 aa8.81□□□□□ -1
DDX55-206ENST00000539934 GNRH2O43555 120 aa8.81□□□□□ -1
DDX55-206ENST00000539934 GAS8-AS1O95177 125 aa8.81□□□□□ -1
DDX55-206ENST00000539934 SPINK13Q1W4C9 94 aa8.81□□□□□ -1
DDX55-206ENST00000539934 RYR2Q92736 4967 aa8.81□□□□□ -1
DDX55-206ENST00000539934 IGHV4-4A0A075B6R2 117 aa8.8□□□□□ -1
DDX55-206ENST00000539934 PSPHP1O15172 72 aa8.8□□□□□ -1
DDX55-206ENST00000539934 LITAFQ99732 161 aa8.8□□□□□ -1
DDX55-206ENST00000539934 SMIM2Q9BVW6 85 aa8.8□□□□□ -1
DDX55-206ENST00000539934 A0A0J9YXY3 114 aa8.79□□□□□ -1
DDX55-206ENST00000539934 ENHOQ6UWT2 76 aa8.79□□□□□ -1
DDX55-206ENST00000539934 STAB2Q8WWQ8 2551 aa8.79□□□□□ -1
DDX55-206ENST00000539934 BIRC6Q9NR09 4857 aa8.79□□□□□ -1
DDX55-206ENST00000539934 RNASE3P12724 160 aaKnown RBP8.78□□□□□ -1
DDX55-206ENST00000539934 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
DDX55-206ENST00000539934 MAP6D1Q9H9H5 199 aa8.78□□□□□ -1
DDX55-206ENST00000539934 NDUFA12Q9UI09 145 aa8.78□□□□□ -1
DDX55-206ENST00000539934 MIAQ16674 131 aa8.78□□□□□ -1
DDX55-206ENST00000539934 C11orf72Q8NBR9 251 aa8.78□□□□□ -1
DDX55-206ENST00000539934 K7EIL1 84 aa8.77□□□□□ -1.01
DDX55-206ENST00000539934 PRYO14603 147 aa8.77□□□□□ -1.01
DDX55-206ENST00000539934 Q5VV11 94 aa8.77□□□□□ -1.01
DDX55-206ENST00000539934 SACSQ9NZJ4 4579 aa8.77□□□□□ -1.01
DDX55-206ENST00000539934 A8MU10 97 aa8.76□□□□□ -1.01
DDX55-206ENST00000539934 C2orf66Q6UXQ4 117 aa8.76□□□□□ -1.01
DDX55-206ENST00000539934 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
DDX55-206ENST00000539934 MUC4Q99102 2169 aa8.76□□□□□ -1.01
DDX55-206ENST00000539934 IGHV1OR15-1A0A075B7D0 117 aa8.76□□□□□ -1.01
DDX55-206ENST00000539934 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
DDX55-206ENST00000539934 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
DDX55-206ENST00000539934 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
DDX55-206ENST00000539934 MGPP08493 103 aa8.74□□□□□ -1.01
DDX55-206ENST00000539934 WWC2-AS2Q96NR7 200 aa8.74□□□□□ -1.01
DDX55-206ENST00000539934 IGHV3-16A0A0C4DH30 117 aa8.73□□□□□ -1.01
DDX55-206ENST00000539934 A8MTW9 85 aa8.73□□□□□ -1.01
DDX55-206ENST00000539934 KRTAP10-11P60412 298 aa8.73□□□□□ -1.01
DDX55-206ENST00000539934 ODF3L2Q3SX64 289 aa8.73□□□□□ -1.01
DDX55-206ENST00000539934 WFDC9Q8NEX5 89 aa8.73□□□□□ -1.01
DDX55-206ENST00000539934 HTN1P15515 57 aa8.72□□□□□ -1.01
DDX55-206ENST00000539934 UBL5Q9BZL1 73 aa8.71□□□□□ -1.02
DDX55-206ENST00000539934 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
DDX55-206ENST00000539934 TRAV10A0A0B4J240 114 aa8.7□□□□□ -1.02
DDX55-206ENST00000539934 IGLV1-51P01701 117 aa8.7□□□□□ -1.02
DDX55-206ENST00000539934 PRM2P04554 102 aa8.7□□□□□ -1.02
DDX55-206ENST00000539934 LYSTQ99698 3801 aa8.7□□□□□ -1.02
DDX55-206ENST00000539934 DYNC2H1Q8NCM8 4307 aaKnown RBP8.69□□□□□ -1.02
DDX55-206ENST00000539934 IGHV3OR16-9A0A0B4J2B5 98 aa8.69□□□□□ -1.02
DDX55-206ENST00000539934 INSP01308 110 aa8.69□□□□□ -1.02
DDX55-206ENST00000539934 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
DDX55-206ENST00000539934 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
DDX55-206ENST00000539934 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
DDX55-206ENST00000539934 CMC4P56277 68 aaPredicted RBP8.69□□□□□ -1.02
DDX55-206ENST00000539934 FAM74A4Q5TZK3 123 aa8.69□□□□□ -1.02
DDX55-206ENST00000539934 HYDINQ4G0P3 5121 aa8.68□□□□□ -1.02
DDX55-206ENST00000539934 F5H697 171 aa8.68□□□□□ -1.02
DDX55-206ENST00000539934 RPL39LQ96EH5 51 aaKnown RBP8.68□□□□□ -1.02
DDX55-206ENST00000539934 PPP1R17O96001 155 aa8.68□□□□□ -1.02
DDX55-206ENST00000539934 TSHBP01222 138 aa8.68□□□□□ -1.02
DDX55-206ENST00000539934 SUMO2P61956 95 aaKnown RBP8.68□□□□□ -1.02
DDX55-206ENST00000539934 PSCAO43653 123 aa8.67□□□□□ -1.02
DDX55-206ENST00000539934 NREPQ16612 68 aa8.67□□□□□ -1.02
DDX55-206ENST00000539934 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
DDX55-206ENST00000539934 DNAH7Q8WXX0 4024 aa8.67□□□□□ -1.02
DDX55-206ENST00000539934 LINC00315P59091 139 aa8.66□□□□□ -1.02
DDX55-206ENST00000539934 C1orf64Q8NEQ6 169 aa8.66□□□□□ -1.02
DDX55-206ENST00000539934 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
DDX55-206ENST00000539934 HUWE1Q7Z6Z7 4374 aaKnown RBP8.66□□□□□ -1.02
DDX55-206ENST00000539934 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
DDX55-206ENST00000539934 SUMO4Q6EEV6 95 aa8.66□□□□□ -1.02
DDX55-206ENST00000539934 C3orf84H3BNL1 204 aa8.65□□□□□ -1.02
DDX55-206ENST00000539934 FAM218AQ96MZ4 157 aa8.65□□□□□ -1.02
DDX55-206ENST00000539934 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
DDX55-206ENST00000539934 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.03
DDX55-206ENST00000539934 STARD9Q9P2P6 4700 aa8.64□□□□□ -1.03
DDX55-206ENST00000539934 TRBV6-8A0A0A6YYG3 113 aa8.64□□□□□ -1.03
DDX55-206ENST00000539934 ZNF625Q96I27 306 aaPredicted RBP8.64□□□□□ -1.03
DDX55-206ENST00000539934 WFDC10AQ9H1F0 79 aa8.64□□□□□ -1.03
DDX55-206ENST00000539934 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
DDX55-206ENST00000539934 B9D2Q9BPU9 175 aa8.64□□□□□ -1.03
DDX55-206ENST00000539934 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
DDX55-206ENST00000539934 Q75L30 129 aa8.63□□□□□ -1.03
DDX55-206ENST00000539934 Q9HAA7 133 aa8.63□□□□□ -1.03
DDX55-206ENST00000539934 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
DDX55-206ENST00000539934 A0A0J9YXV3 536 aa8.62□□□□□ -1.03
DDX55-206ENST00000539934 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
DDX55-206ENST00000539934 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
DDX55-206ENST00000539934 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
DDX55-206ENST00000539934 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
DDX55-206ENST00000539934 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
DDX55-206ENST00000539934 IGHV3-73A0A0B4J1V6 119 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms