RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 LEPROTO15243 131 aa9.11□□□□□ -0.95
USB1-203ENST00000539737 HERV-K104P63124 156 aa9.11□□□□□ -0.95
USB1-203ENST00000539737 MYMXA0A1B0GTQ4 84 aa9.1□□□□□ -0.95
USB1-203ENST00000539737 UBE2BP63146 152 aa9.1□□□□□ -0.95
USB1-203ENST00000539737 LINC01545Q5VT33 79 aa9.1□□□□□ -0.95
USB1-203ENST00000539737 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
USB1-203ENST00000539737 TP73-AS1Q9UF72 201 aa9.1□□□□□ -0.95
USB1-203ENST00000539737 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
USB1-203ENST00000539737 LINC00587B1AMM8 73 aa9.09□□□□□ -0.95
USB1-203ENST00000539737 C3orf79P0CE67 100 aa9.09□□□□□ -0.95
USB1-203ENST00000539737 LBHQ53QV2 105 aaPredicted RBP9.09□□□□□ -0.95
USB1-203ENST00000539737 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
USB1-203ENST00000539737 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
USB1-203ENST00000539737 C20orf202A1L168 122 aa9.08□□□□□ -0.96
USB1-203ENST00000539737 J3QQQ9 107 aa9.08□□□□□ -0.96
USB1-203ENST00000539737 LGALS3P17931 250 aaKnown RBP9.08□□□□□ -0.96
USB1-203ENST00000539737 NMUP48645 174 aa9.08□□□□□ -0.96
USB1-203ENST00000539737 KRTDAPP60985 99 aa9.08□□□□□ -0.96
USB1-203ENST00000539737 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
USB1-203ENST00000539737 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
USB1-203ENST00000539737 C22orf24Q9Y442 160 aa9.08□□□□□ -0.96
USB1-203ENST00000539737 LINC00158P58513 81 aa9.07□□□□□ -0.96
USB1-203ENST00000539737 TSPEAR-AS2P59090 65 aa9.07□□□□□ -0.96
USB1-203ENST00000539737 SND1-IT1Q9HBX3 110 aa9.07□□□□□ -0.96
USB1-203ENST00000539737 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
USB1-203ENST00000539737 E9PLD3 99 aa9.06□□□□□ -0.96
USB1-203ENST00000539737 S100A6P06703 90 aa9.06□□□□□ -0.96
USB1-203ENST00000539737 MRPL55Q7Z7F7 128 aaKnown RBP9.06□□□□□ -0.96
USB1-203ENST00000539737 NKAPP1Q8N9T2 125 aa9.06□□□□□ -0.96
USB1-203ENST00000539737 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
USB1-203ENST00000539737 S100A2P29034 98 aa9.05□□□□□ -0.96
USB1-203ENST00000539737 AKR1D1P51857 326 aa9.05□□□□□ -0.96
USB1-203ENST00000539737 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
USB1-203ENST00000539737 SMIM13P0DJ93 91 aa9.04□□□□□ -0.96
USB1-203ENST00000539737 RPL24P83731 157 aaKnown RBP9.04□□□□□ -0.96
USB1-203ENST00000539737 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
USB1-203ENST00000539737 FAT4Q6V0I7 4981 aa9.02□□□□□ -0.97
USB1-203ENST00000539737 A0A0U1RRA0 63 aa9.02□□□□□ -0.97
USB1-203ENST00000539737 VPREB1P12018 145 aa9.01□□□□□ -0.97
USB1-203ENST00000539737 MIR7-3HGQ8N6C7 128 aa9.01□□□□□ -0.97
USB1-203ENST00000539737 HIST1H2BLQ99880 126 aa9.01□□□□□ -0.97
USB1-203ENST00000539737 H0Y9J4 135 aa9□□□□□ -0.97
USB1-203ENST00000539737 LINC00167Q96N53 147 aa9□□□□□ -0.97
USB1-203ENST00000539737 GAGE10A6NGK3 116 aa8.99□□□□□ -0.97
USB1-203ENST00000539737 PRR4Q16378 134 aa8.98□□□□□ -0.97
USB1-203ENST00000539737 A0A0J9YXY3 114 aa8.97□□□□□ -0.97
USB1-203ENST00000539737 RPL37AP8A6NKH3 93 aa8.97□□□□□ -0.97
USB1-203ENST00000539737 BOD1L2Q8IYS8 172 aa8.97□□□□□ -0.97
USB1-203ENST00000539737 IGLV1-50A0A075B6I6 118 aa8.96□□□□□ -0.98
USB1-203ENST00000539737 SNRPEP62304 92 aaKnown RBP8.96□□□□□ -0.98
USB1-203ENST00000539737 MIEN1Q9BRT3 115 aa8.96□□□□□ -0.98
USB1-203ENST00000539737 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
USB1-203ENST00000539737 IGKV2D-26A0A0A0MRZ7 120 aa8.95□□□□□ -0.98
USB1-203ENST00000539737 ZNF815PA8K554 130 aa8.95□□□□□ -0.98
USB1-203ENST00000539737 BCE1O60756 84 aa8.95□□□□□ -0.98
USB1-203ENST00000539737 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
USB1-203ENST00000539737 DAND5Q8N907 189 aa8.95□□□□□ -0.98
USB1-203ENST00000539737 Q8NDZ9 215 aa8.95□□□□□ -0.98
USB1-203ENST00000539737 LOC107984156A0A0G2JMH3 177 aa8.94□□□□□ -0.98
USB1-203ENST00000539737 M0R378 163 aa8.94□□□□□ -0.98
USB1-203ENST00000539737 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
USB1-203ENST00000539737 RPL13AP40429 203 aaKnown RBP8.94□□□□□ -0.98
USB1-203ENST00000539737 ARL17AQ8IVW1 177 aa8.94□□□□□ -0.98
USB1-203ENST00000539737 ATOH7Q8N100 152 aa8.94□□□□□ -0.98
USB1-203ENST00000539737 C5orf52A6NGY3 159 aa8.93□□□□□ -0.98
USB1-203ENST00000539737 ZNF861PO60384 105 aa8.93□□□□□ -0.98
USB1-203ENST00000539737 TIMM17BO60830 172 aa8.93□□□□□ -0.98
USB1-203ENST00000539737 RPL28P46779 137 aaKnown RBP8.92□□□□□ -0.98
USB1-203ENST00000539737 ANKRD39Q53RE8 183 aa8.92□□□□□ -0.98
USB1-203ENST00000539737 HSBP1L1C9JCN9 74 aa8.91□□□□□ -0.98
USB1-203ENST00000539737 NCR3O14931 201 aa8.91□□□□□ -0.98
USB1-203ENST00000539737 TTTY13Q9BZ97 58 aa8.9□□□□□ -0.98
USB1-203ENST00000539737 TMEM126AQ9H061 195 aa8.9□□□□□ -0.98
USB1-203ENST00000539737 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
USB1-203ENST00000539737 TRBV10-2A0A0K0K1G8 114 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 NDUFC2O95298 119 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 TSPAN13O95857 204 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 UBE2AP49459 152 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 ADAMTSL4-AS1Q5T5F5 129 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
USB1-203ENST00000539737 SCGB1D4Q6XE38 83 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 LITAFQ99732 161 aa8.89□□□□□ -0.99
USB1-203ENST00000539737 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
USB1-203ENST00000539737 PRYO14603 147 aa8.88□□□□□ -0.99
USB1-203ENST00000539737 S100A12P80511 92 aa8.88□□□□□ -0.99
USB1-203ENST00000539737 SCGB1D1O95968 90 aa8.87□□□□□ -0.99
USB1-203ENST00000539737 NPC2P61916 151 aa8.87□□□□□ -0.99
USB1-203ENST00000539737 SOSTDC1Q6X4U4 206 aa8.86□□□□□ -0.99
USB1-203ENST00000539737 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
USB1-203ENST00000539737 KRTAP13-1Q8IUC0 172 aa8.86□□□□□ -0.99
USB1-203ENST00000539737 LINC00308Q8TCZ7 52 aa8.86□□□□□ -0.99
USB1-203ENST00000539737 COPS9Q8WXC6 57 aa8.86□□□□□ -0.99
USB1-203ENST00000539737 PCP2Q8IVA1 136 aa8.85□□□□□ -0.99
USB1-203ENST00000539737 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
USB1-203ENST00000539737 KCNQ1DNQ9H478 68 aa8.85□□□□□ -0.99
USB1-203ENST00000539737 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
USB1-203ENST00000539737 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
USB1-203ENST00000539737 TRBV10-3A0A0K0K1G6 114 aa8.84□□□□□ -0.99
USB1-203ENST00000539737 DDTP30046 118 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms