RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PDE6GP18545 87 aa12.07□□□□□ -0.48
RAB40C-205ENST00000539661 LINC00482Q8N8I6 264 aa12.06□□□□□ -0.48
RAB40C-205ENST00000539661 IGLV1-51P01701 117 aa12.06□□□□□ -0.48
RAB40C-205ENST00000539661 RNASE1P07998 156 aaKnown RBP12.06□□□□□ -0.48
RAB40C-205ENST00000539661 SERP1Q9Y6X1 66 aa12.06□□□□□ -0.48
RAB40C-205ENST00000539661 TRRAPQ9Y4A5 3859 aa12.05□□□□□ -0.48
RAB40C-205ENST00000539661 HIVEP2P31629 2446 aa12.05□□□□□ -0.48
RAB40C-205ENST00000539661 LINC01547P58512 204 aaPredicted RBP12.05□□□□□ -0.48
RAB40C-205ENST00000539661 KLKP1Q107X0 134 aa12.05□□□□□ -0.48
RAB40C-205ENST00000539661 H7BZZ5 65 aa12.04□□□□□ -0.48
RAB40C-205ENST00000539661 HRCT1Q6UXD1 115 aa12.04□□□□□ -0.48
RAB40C-205ENST00000539661 TENM1Q9UKZ4 2725 aa12.04□□□□□ -0.48
RAB40C-205ENST00000539661 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
RAB40C-205ENST00000539661 SMR3AQ99954 134 aa12.04□□□□□ -0.48
RAB40C-205ENST00000539661 DEFB130BP0DP73 79 aa12.03□□□□□ -0.48
RAB40C-205ENST00000539661 DEFB130AP0DP74 79 aa12.03□□□□□ -0.48
RAB40C-205ENST00000539661 CXCL6P80162 114 aa12.03□□□□□ -0.48
RAB40C-205ENST00000539661 C9orf66Q5T8R8 295 aa12.03□□□□□ -0.48
RAB40C-205ENST00000539661 LAMTOR3Q9UHA4 124 aa12.03□□□□□ -0.48
RAB40C-205ENST00000539661 Q6ZVQ6 151 aa12.02□□□□□ -0.49
RAB40C-205ENST00000539661 DNAJC9-AS1A6NH13 148 aa12.01□□□□□ -0.49
RAB40C-205ENST00000539661 Q8NDZ9 215 aa12.01□□□□□ -0.49
RAB40C-205ENST00000539661 CHCHD10Q8WYQ3 142 aaPredicted RBP12.01□□□□□ -0.49
RAB40C-205ENST00000539661 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
RAB40C-205ENST00000539661 PRO0255Q9UI72 69 aa12.01□□□□□ -0.49
RAB40C-205ENST00000539661 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
RAB40C-205ENST00000539661 MRAPQ8TCY5 172 aa12□□□□□ -0.49
RAB40C-205ENST00000539661 C9orf116Q5BN46 136 aaPredicted RBP11.99□□□□□ -0.49
RAB40C-205ENST00000539661 IGLV6-57P01721 117 aa11.99□□□□□ -0.49
RAB40C-205ENST00000539661 HAMPP81172 84 aa11.99□□□□□ -0.49
RAB40C-205ENST00000539661 FLNBO75369 2602 aaKnown RBP11.97□□□□□ -0.49
RAB40C-205ENST00000539661 M0R2N4 97 aa11.96□□□□□ -0.49
RAB40C-205ENST00000539661 REG3AQ06141 175 aa11.96□□□□□ -0.49
RAB40C-205ENST00000539661 TRAV10A0A0B4J240 114 aa11.95□□□□□ -0.5
RAB40C-205ENST00000539661 NDUFC1O43677 76 aa11.95□□□□□ -0.5
RAB40C-205ENST00000539661 Q6ZQY7 126 aa11.95□□□□□ -0.5
RAB40C-205ENST00000539661 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
RAB40C-205ENST00000539661 IGHV4-30-4P0DP06 118 aa11.94□□□□□ -0.5
RAB40C-205ENST00000539661 ANGP03950 147 aaKnown RBP11.94□□□□□ -0.5
RAB40C-205ENST00000539661 HIVEP1P15822 2718 aa11.93□□□□□ -0.5
RAB40C-205ENST00000539661 IGLV10-54A0A075B6I4 117 aa11.92□□□□□ -0.5
RAB40C-205ENST00000539661 LINC01006Q8NI28 216 aa11.92□□□□□ -0.5
RAB40C-205ENST00000539661 A0A096LPF7 62 aa11.92□□□□□ -0.5
RAB40C-205ENST00000539661 ATRQ13535 2644 aa11.92□□□□□ -0.5
RAB40C-205ENST00000539661 TRBV7-4A0A0J9YYF1 115 aa11.91□□□□□ -0.5
RAB40C-205ENST00000539661 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
RAB40C-205ENST00000539661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.91□□□□□ -0.5
RAB40C-205ENST00000539661 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
RAB40C-205ENST00000539661 KRTAP1-1Q07627 177 aa11.91□□□□□ -0.5
RAB40C-205ENST00000539661 SPATA3Q8NHX4 192 aa11.91□□□□□ -0.5
RAB40C-205ENST00000539661 ATP5EP56381 51 aaPredicted RBP11.9□□□□□ -0.5
RAB40C-205ENST00000539661 UNQ6190/PRO20217Q6UXQ8 127 aa11.9□□□□□ -0.5
RAB40C-205ENST00000539661 Q8N3U1 123 aa11.9□□□□□ -0.5
RAB40C-205ENST00000539661 SMIM26A0A096LP01 95 aa11.9□□□□□ -0.5
RAB40C-205ENST00000539661 X6R8D5 127 aa11.9□□□□□ -0.5
RAB40C-205ENST00000539661 C10orf25Q5T742 122 aa11.9□□□□□ -0.51
RAB40C-205ENST00000539661 DIRC1Q969H9 104 aa11.9□□□□□ -0.51
RAB40C-205ENST00000539661 RMI2Q96E14 147 aa11.9□□□□□ -0.51
RAB40C-205ENST00000539661 LYRM9A8MSI8 78 aa11.89□□□□□ -0.51
RAB40C-205ENST00000539661 SNURFQ9Y675 71 aa11.89□□□□□ -0.51
RAB40C-205ENST00000539661 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
RAB40C-205ENST00000539661 F8WEM9 126 aa11.89□□□□□ -0.51
RAB40C-205ENST00000539661 NSD1Q96L73 2696 aaPredicted RBP11.88□□□□□ -0.51
RAB40C-205ENST00000539661 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
RAB40C-205ENST00000539661 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
RAB40C-205ENST00000539661 J3QKU1 62 aa11.87□□□□□ -0.51
RAB40C-205ENST00000539661 TEP1Q99973 2627 aaKnown RBP11.86□□□□□ -0.51
RAB40C-205ENST00000539661 ERC2-IT1O76042 136 aa11.85□□□□□ -0.51
RAB40C-205ENST00000539661 PRO0628Q9UI54 55 aa11.85□□□□□ -0.51
RAB40C-205ENST00000539661 COX7BP24311 80 aa11.85□□□□□ -0.51
RAB40C-205ENST00000539661 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
RAB40C-205ENST00000539661 ZNF73O43830 326 aaPredicted RBP11.83□□□□□ -0.52
RAB40C-205ENST00000539661 ELOF1P60002 83 aaKnown RBP11.83□□□□□ -0.52
RAB40C-205ENST00000539661 MIFP14174 115 aa11.83□□□□□ -0.52
RAB40C-205ENST00000539661 NREPQ16612 68 aa11.82□□□□□ -0.52
RAB40C-205ENST00000539661 FP248Q71RG6 208 aaPredicted RBP11.81□□□□□ -0.52
RAB40C-205ENST00000539661 PRR34Q9NV39 138 aa11.8□□□□□ -0.52
RAB40C-205ENST00000539661 LINC00336Q6ZUF6 198 aa11.8□□□□□ -0.52
RAB40C-205ENST00000539661 BPY2O14599 106 aa11.79□□□□□ -0.52
RAB40C-205ENST00000539661 LELP1Q5T871 98 aa11.79□□□□□ -0.52
RAB40C-205ENST00000539661 SCXQ7RTU7 201 aa11.78□□□□□ -0.52
RAB40C-205ENST00000539661 C6orf48Q9UBA6 75 aa11.78□□□□□ -0.52
RAB40C-205ENST00000539661 TMEM254Q8TBM7 123 aa11.78□□□□□ -0.52
RAB40C-205ENST00000539661 DAD1P61803 113 aa11.76□□□□□ -0.53
RAB40C-205ENST00000539661 XAGE1AQ9HD64 81 aa11.75□□□□□ -0.53
RAB40C-205ENST00000539661 CELA1Q9UNI1 258 aa11.74□□□□□ -0.53
RAB40C-205ENST00000539661 VPREB1P12018 145 aa11.73□□□□□ -0.53
RAB40C-205ENST00000539661 KLK12Q9UKR0 248 aa11.73□□□□□ -0.53
RAB40C-205ENST00000539661 M0R378 163 aa11.73□□□□□ -0.53
RAB40C-205ENST00000539661 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
RAB40C-205ENST00000539661 IGKV4-1P06312 121 aa11.72□□□□□ -0.53
RAB40C-205ENST00000539661 KRTAP10-3P60369 221 aa11.72□□□□□ -0.53
RAB40C-205ENST00000539661 PKD1L1Q8TDX9 2849 aa11.71□□□□□ -0.53
RAB40C-205ENST00000539661 OCR1Q9BZK8 76 aa11.7□□□□□ -0.54
RAB40C-205ENST00000539661 F8P00451 2351 aa11.7□□□□□ -0.54
RAB40C-205ENST00000539661 A0A0U1RQV1 116 aa11.7□□□□□ -0.54
RAB40C-205ENST00000539661 PRYO14603 147 aa11.69□□□□□ -0.54
RAB40C-205ENST00000539661 DEFB4AO15263 64 aa11.69□□□□□ -0.54
RAB40C-205ENST00000539661 EGFEM1PQ0D2K5 195 aa11.69□□□□□ -0.54
RAB40C-205ENST00000539661 LINC00474Q9P2X8 69 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms