RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TRAV10A0A0B4J240 114 aa12.74□□□□□ -0.37
SFSWAP-207ENST00000538548 IGHV4-28A0A0C4DH34 117 aa12.74□□□□□ -0.37
SFSWAP-207ENST00000538548 RPL35AP18077 110 aaKnown RBP12.74□□□□□ -0.37
SFSWAP-207ENST00000538548 CLPSL2Q6UWE3 100 aa12.74□□□□□ -0.37
SFSWAP-207ENST00000538548 M0R2N4 97 aa12.74□□□□□ -0.37
SFSWAP-207ENST00000538548 PDE6GP18545 87 aa12.73□□□□□ -0.37
SFSWAP-207ENST00000538548 PRO0628Q9UI54 55 aa12.73□□□□□ -0.37
SFSWAP-207ENST00000538548 CCL24O00175 119 aa12.73□□□□□ -0.37
SFSWAP-207ENST00000538548 Q8NDZ9 215 aa12.73□□□□□ -0.37
SFSWAP-207ENST00000538548 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
SFSWAP-207ENST00000538548 WFDC10AQ9H1F0 79 aa12.72□□□□□ -0.37
SFSWAP-207ENST00000538548 SNURFQ9Y675 71 aa12.72□□□□□ -0.37
SFSWAP-207ENST00000538548 C9orf66Q5T8R8 295 aa12.72□□□□□ -0.37
SFSWAP-207ENST00000538548 RMI2Q96E14 147 aa12.72□□□□□ -0.37
SFSWAP-207ENST00000538548 CD164L2Q6UWJ8 174 aa12.71□□□□□ -0.37
SFSWAP-207ENST00000538548 C9orf116Q5BN46 136 aaPredicted RBP12.71□□□□□ -0.38
SFSWAP-207ENST00000538548 LINC00336Q6ZUF6 198 aa12.71□□□□□ -0.38
SFSWAP-207ENST00000538548 SMIM26A0A096LP01 95 aa12.7□□□□□ -0.38
SFSWAP-207ENST00000538548 GYPEP15421 78 aa12.7□□□□□ -0.38
SFSWAP-207ENST00000538548 F8WEM9 126 aa12.7□□□□□ -0.38
SFSWAP-207ENST00000538548 H3BQ85 93 aa12.69□□□□□ -0.38
SFSWAP-207ENST00000538548 HIVEP2P31629 2446 aa12.69□□□□□ -0.38
SFSWAP-207ENST00000538548 NDUFC1O43677 76 aa12.69□□□□□ -0.38
SFSWAP-207ENST00000538548 ANK3Q12955 4377 aaKnown RBP12.69□□□□□ -0.38
SFSWAP-207ENST00000538548 Q8N3U1 123 aa12.68□□□□□ -0.38
SFSWAP-207ENST00000538548 DEFB130BP0DP73 79 aa12.67□□□□□ -0.38
SFSWAP-207ENST00000538548 DEFB130AP0DP74 79 aa12.67□□□□□ -0.38
SFSWAP-207ENST00000538548 LINC00269Q8N2A0 174 aa12.67□□□□□ -0.38
SFSWAP-207ENST00000538548 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
SFSWAP-207ENST00000538548 Q6ZQY7 126 aa12.67□□□□□ -0.38
SFSWAP-207ENST00000538548 FP248Q71RG6 208 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-207ENST00000538548 C16orf95Q9H693 158 aa12.66□□□□□ -0.38
SFSWAP-207ENST00000538548 CHCHD10Q8WYQ3 142 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-207ENST00000538548 FN1P02751 2386 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-207ENST00000538548 SMR3AQ99954 134 aa12.65□□□□□ -0.38
SFSWAP-207ENST00000538548 MUC7Q8TAX7 377 aa12.65□□□□□ -0.38
SFSWAP-207ENST00000538548 IGLV6-57P01721 117 aa12.64□□□□□ -0.39
SFSWAP-207ENST00000538548 TRBV7-4A0A0J9YYF1 115 aa12.64□□□□□ -0.39
SFSWAP-207ENST00000538548 ATP5EP56381 51 aaPredicted RBP12.64□□□□□ -0.39
SFSWAP-207ENST00000538548 HIVEP1P15822 2718 aa12.64□□□□□ -0.39
SFSWAP-207ENST00000538548 LINC00612Q8N6U2 182 aa12.63□□□□□ -0.39
SFSWAP-207ENST00000538548 TM2D3Q9BRN9 247 aa12.63□□□□□ -0.39
SFSWAP-207ENST00000538548 SPATA3Q8NHX4 192 aa12.62□□□□□ -0.39
SFSWAP-207ENST00000538548 IGLV10-54A0A075B6I4 117 aa12.61□□□□□ -0.39
SFSWAP-207ENST00000538548 TRBV7-6A0A0J9YX20 115 aa12.6□□□□□ -0.39
SFSWAP-207ENST00000538548 PRO0255Q9UI72 69 aa12.6□□□□□ -0.39
SFSWAP-207ENST00000538548 A0A096LPF7 62 aa12.6□□□□□ -0.39
SFSWAP-207ENST00000538548 IGLV1-51P01701 117 aa12.6□□□□□ -0.39
SFSWAP-207ENST00000538548 MIFP14174 115 aa12.6□□□□□ -0.39
SFSWAP-207ENST00000538548 REG3AQ06141 175 aa12.59□□□□□ -0.39
SFSWAP-207ENST00000538548 LINC01006Q8NI28 216 aa12.59□□□□□ -0.39
SFSWAP-207ENST00000538548 TEP1Q99973 2627 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-207ENST00000538548 ANGP03950 147 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-207ENST00000538548 C10orf25Q5T742 122 aa12.58□□□□□ -0.4
SFSWAP-207ENST00000538548 SCXQ7RTU7 201 aa12.58□□□□□ -0.4
SFSWAP-207ENST00000538548 NREPQ16612 68 aa12.57□□□□□ -0.4
SFSWAP-207ENST00000538548 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
SFSWAP-207ENST00000538548 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
SFSWAP-207ENST00000538548 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
SFSWAP-207ENST00000538548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-207ENST00000538548 NSD1Q96L73 2696 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-207ENST00000538548 ERC2-IT1O76042 136 aa12.56□□□□□ -0.4
SFSWAP-207ENST00000538548 SPAG11BQ08648 103 aa12.56□□□□□ -0.4
SFSWAP-207ENST00000538548 DIRC1Q969H9 104 aa12.56□□□□□ -0.4
SFSWAP-207ENST00000538548 TMEM254Q8TBM7 123 aa12.55□□□□□ -0.4
SFSWAP-207ENST00000538548 VWFP04275 2813 aa12.55□□□□□ -0.4
SFSWAP-207ENST00000538548 C1orf43Q9BWL3 253 aa12.54□□□□□ -0.4
SFSWAP-207ENST00000538548 LINC00474Q9P2X8 69 aa12.54□□□□□ -0.4
SFSWAP-207ENST00000538548 TENM1Q9UKZ4 2725 aa12.54□□□□□ -0.4
SFSWAP-207ENST00000538548 BPY2O14599 106 aa12.54□□□□□ -0.4
SFSWAP-207ENST00000538548 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
SFSWAP-207ENST00000538548 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
SFSWAP-207ENST00000538548 ESM1Q9NQ30 184 aa12.53□□□□□ -0.4
SFSWAP-207ENST00000538548 CYSRT1A8MQ03 144 aa12.52□□□□□ -0.4
SFSWAP-207ENST00000538548 ZNF73O43830 326 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-207ENST00000538548 COX7BP24311 80 aa12.5□□□□□ -0.41
SFSWAP-207ENST00000538548 ATRQ13535 2644 aa12.49□□□□□ -0.41
SFSWAP-207ENST00000538548 ELOF1P60002 83 aaKnown RBP12.48□□□□□ -0.41
SFSWAP-207ENST00000538548 GVQW2A0A096LPI5 108 aaPredicted RBP12.48□□□□□ -0.41
SFSWAP-207ENST00000538548 X6R8D5 127 aa12.47□□□□□ -0.41
SFSWAP-207ENST00000538548 F8P00451 2351 aa12.46□□□□□ -0.41
SFSWAP-207ENST00000538548 OCR1Q9BZK8 76 aa12.44□□□□□ -0.42
SFSWAP-207ENST00000538548 IGKV4-1P06312 121 aa12.44□□□□□ -0.42
SFSWAP-207ENST00000538548 XAGE1AQ9HD64 81 aa12.44□□□□□ -0.42
SFSWAP-207ENST00000538548 PKIGQ9Y2B9 76 aa12.44□□□□□ -0.42
SFSWAP-207ENST00000538548 A0A0U1RQV1 116 aa12.43□□□□□ -0.42
SFSWAP-207ENST00000538548 PRYO14603 147 aa12.43□□□□□ -0.42
SFSWAP-207ENST00000538548 TRRAPQ9Y4A5 3859 aa12.43□□□□□ -0.42
SFSWAP-207ENST00000538548 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
SFSWAP-207ENST00000538548 BRK1Q8WUW1 75 aa12.43□□□□□ -0.42
SFSWAP-207ENST00000538548 NBEAL2Q6ZNJ1 2754 aa12.43□□□□□ -0.42
SFSWAP-207ENST00000538548 Q8N9L7 120 aa12.42□□□□□ -0.42
SFSWAP-207ENST00000538548 C6orf48Q9UBA6 75 aa12.42□□□□□ -0.42
SFSWAP-207ENST00000538548 FAM229BQ4G0N7 80 aa12.41□□□□□ -0.42
SFSWAP-207ENST00000538548 FUSP35637 526 aaKnown RBP eCLIP12.39□□□□□ -0.43
SFSWAP-207ENST00000538548 PRR34Q9NV39 138 aa12.39□□□□□ -0.43
SFSWAP-207ENST00000538548 CELA1Q9UNI1 258 aa12.39□□□□□ -0.43
SFSWAP-207ENST00000538548 ESRGQ1W209 222 aa12.38□□□□□ -0.43
SFSWAP-207ENST00000538548 MPLKIPQ8TAP9 179 aa12.37□□□□□ -0.43
SFSWAP-207ENST00000538548 LINC00528Q8N1L1 170 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms