RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 COX6CP09669 75 aa9.35□□□□□ -0.91
ACTN1-205ENST00000538545 ATXN8Q156A1 80 aa9.34□□□□□ -0.91
ACTN1-205ENST00000538545 TRAV13-2A0A0B4J235 113 aa9.33□□□□□ -0.92
ACTN1-205ENST00000538545 ANKRD29Q8N6D5 301 aa9.33□□□□□ -0.92
ACTN1-205ENST00000538545 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
ACTN1-205ENST00000538545 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
ACTN1-205ENST00000538545 FBN3Q75N90 2809 aa9.32□□□□□ -0.92
ACTN1-205ENST00000538545 LST1O00453 97 aa9.32□□□□□ -0.92
ACTN1-205ENST00000538545 COX17Q14061 63 aa9.31□□□□□ -0.92
ACTN1-205ENST00000538545 CARD19Q96LW7 228 aa9.31□□□□□ -0.92
ACTN1-205ENST00000538545 K7ERU9 68 aa9.31□□□□□ -0.92
ACTN1-205ENST00000538545 SLPIP03973 132 aa9.31□□□□□ -0.92
ACTN1-205ENST00000538545 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
ACTN1-205ENST00000538545 DYNC2H1Q8NCM8 4307 aaKnown RBP9.3□□□□□ -0.92
ACTN1-205ENST00000538545 A0A087WYN8 130 aa9.3□□□□□ -0.92
ACTN1-205ENST00000538545 VPS25Q9BRG1 176 aa9.3□□□□□ -0.92
ACTN1-205ENST00000538545 APLNQ9ULZ1 77 aa9.3□□□□□ -0.92
ACTN1-205ENST00000538545 UBE2DNLQ8IWF7 75 aa9.29□□□□□ -0.92
ACTN1-205ENST00000538545 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
ACTN1-205ENST00000538545 RPL28P46779 137 aaKnown RBP9.28□□□□□ -0.92
ACTN1-205ENST00000538545 TEX49A0A1B0GTD5 131 aa9.28□□□□□ -0.92
ACTN1-205ENST00000538545 Q6ZRP5 223 aa9.27□□□□□ -0.92
ACTN1-205ENST00000538545 KMT2AQ03164 3969 aa9.27□□□□□ -0.93
ACTN1-205ENST00000538545 TRBV10-2A0A0K0K1G8 114 aa9.27□□□□□ -0.93
ACTN1-205ENST00000538545 TEN1Q86WV5 123 aa9.27□□□□□ -0.93
ACTN1-205ENST00000538545 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
ACTN1-205ENST00000538545 A0A1B0GV72 72 aa9.25□□□□□ -0.93
ACTN1-205ENST00000538545 SYCNQ0VAF6 134 aa9.25□□□□□ -0.93
ACTN1-205ENST00000538545 GVQW2A0A096LPI5 108 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-205ENST00000538545 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
ACTN1-205ENST00000538545 S100A7L2Q5SY68 101 aa9.24□□□□□ -0.93
ACTN1-205ENST00000538545 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
ACTN1-205ENST00000538545 NDUFC2O95298 119 aa9.23□□□□□ -0.93
ACTN1-205ENST00000538545 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
ACTN1-205ENST00000538545 M0R2N4 97 aa9.22□□□□□ -0.93
ACTN1-205ENST00000538545 NDUFC2-KCTD14E9PQ53 114 aa9.22□□□□□ -0.93
ACTN1-205ENST00000538545 C9orf129Q5T035 196 aaKnown RBP9.22□□□□□ -0.93
ACTN1-205ENST00000538545 C2orf48Q96LS8 159 aa9.21□□□□□ -0.93
ACTN1-205ENST00000538545 TMEM126AQ9H061 195 aa9.21□□□□□ -0.93
ACTN1-205ENST00000538545 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
ACTN1-205ENST00000538545 PPDPFLQ8WWR9 84 aa9.2□□□□□ -0.94
ACTN1-205ENST00000538545 C22orf24Q9Y442 160 aa9.2□□□□□ -0.94
ACTN1-205ENST00000538545 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-205ENST00000538545 BAALC-AS2P0C853 105 aa9.19□□□□□ -0.94
ACTN1-205ENST00000538545 VPREB1P12018 145 aa9.19□□□□□ -0.94
ACTN1-205ENST00000538545 SERTAD4-AS1Q5TG53 156 aa9.19□□□□□ -0.94
ACTN1-205ENST00000538545 VPS13DQ5THJ4 4388 aa9.18□□□□□ -0.94
ACTN1-205ENST00000538545 PSCAO43653 123 aa9.18□□□□□ -0.94
ACTN1-205ENST00000538545 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-205ENST00000538545 GAGE2BQ13066 116 aa9.18□□□□□ -0.94
ACTN1-205ENST00000538545 H3BT86 120 aa9.17□□□□□ -0.94
ACTN1-205ENST00000538545 TRACP01848 142 aa9.17□□□□□ -0.94
ACTN1-205ENST00000538545 DNAL4O96015 105 aa9.16□□□□□ -0.94
ACTN1-205ENST00000538545 FUSP35637 526 aaKnown RBP eCLIP9.16□□□□□ -0.94
ACTN1-205ENST00000538545 IGLV6-57P01721 117 aa9.16□□□□□ -0.94
ACTN1-205ENST00000538545 NUPR2A6NF83 97 aa9.15□□□□□ -0.94
ACTN1-205ENST00000538545 RMI2Q96E14 147 aa9.15□□□□□ -0.94
ACTN1-205ENST00000538545 H0YGX0 51 aa9.14□□□□□ -0.95
ACTN1-205ENST00000538545 J3QR89 54 aa9.14□□□□□ -0.95
ACTN1-205ENST00000538545 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
ACTN1-205ENST00000538545 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
ACTN1-205ENST00000538545 KRTAP7-1Q8IUC3 87 aa9.13□□□□□ -0.95
ACTN1-205ENST00000538545 TRAV23DV6A0A075B6W5 121 aa9.13□□□□□ -0.95
ACTN1-205ENST00000538545 IGKV2-24A0A0C4DH68 120 aa9.13□□□□□ -0.95
ACTN1-205ENST00000538545 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
ACTN1-205ENST00000538545 Q8N814 137 aa9.12□□□□□ -0.95
ACTN1-205ENST00000538545 NBDYA0A0U1RRE5 68 aa9.11□□□□□ -0.95
ACTN1-205ENST00000538545 M0QXV9 152 aa9.11□□□□□ -0.95
ACTN1-205ENST00000538545 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-205ENST00000538545 MUC7Q8TAX7 377 aa9.11□□□□□ -0.95
ACTN1-205ENST00000538545 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-205ENST00000538545 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
ACTN1-205ENST00000538545 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
ACTN1-205ENST00000538545 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
ACTN1-205ENST00000538545 M0R378 163 aa9.09□□□□□ -0.96
ACTN1-205ENST00000538545 CHTF8P0CG12 524 aa9.09□□□□□ -0.96
ACTN1-205ENST00000538545 LINC00575Q6W349 94 aa9.09□□□□□ -0.96
ACTN1-205ENST00000538545 NKAPP1Q8N9T2 125 aa9.08□□□□□ -0.96
ACTN1-205ENST00000538545 C14orf132Q9NPU4 83 aa9.08□□□□□ -0.96
ACTN1-205ENST00000538545 A0A096LNI7 61 aa9.08□□□□□ -0.96
ACTN1-205ENST00000538545 XGP55808 180 aa9.07□□□□□ -0.96
ACTN1-205ENST00000538545 DIRC1Q969H9 104 aa9.07□□□□□ -0.96
ACTN1-205ENST00000538545 ORMDL1Q9P0S3 153 aa9.06□□□□□ -0.96
ACTN1-205ENST00000538545 MT-ATP8P03928 68 aa9.06□□□□□ -0.96
ACTN1-205ENST00000538545 Q6ZQY7 126 aa9.06□□□□□ -0.96
ACTN1-205ENST00000538545 hADV29S1A0JD25 119 aa9.05□□□□□ -0.96
ACTN1-205ENST00000538545 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
ACTN1-205ENST00000538545 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
ACTN1-205ENST00000538545 LRCOL1A6NCL2 159 aa9.04□□□□□ -0.96
ACTN1-205ENST00000538545 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-205ENST00000538545 F8WDY8 70 aa9.04□□□□□ -0.96
ACTN1-205ENST00000538545 LINC00167Q96N53 147 aa9.04□□□□□ -0.96
ACTN1-205ENST00000538545 LOC107984640A0A0U1RRK4 108 aa9.03□□□□□ -0.96
ACTN1-205ENST00000538545 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
ACTN1-205ENST00000538545 COX7BP24311 80 aa9.03□□□□□ -0.96
ACTN1-205ENST00000538545 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.97
ACTN1-205ENST00000538545 SIGMAR1Q99720 223 aa9.02□□□□□ -0.97
ACTN1-205ENST00000538545 ELOF1P60002 83 aaKnown RBP9.01□□□□□ -0.97
ACTN1-205ENST00000538545 TTC32Q5I0X7 151 aa9.01□□□□□ -0.97
ACTN1-205ENST00000538545 PANO1I0J062 215 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms