RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
CHFR-216ENST00000538235 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
CHFR-216ENST00000538235 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
CHFR-216ENST00000538235 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
CHFR-216ENST00000538235 Q5VSD8 79 aa8.24□□□□□ -1.09
CHFR-216ENST00000538235 LINC00528Q8N1L1 170 aa8.24□□□□□ -1.09
CHFR-216ENST00000538235 PLAC8Q9NZF1 115 aa8.24□□□□□ -1.09
CHFR-216ENST00000538235 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
CHFR-216ENST00000538235 LOC107984640A0A0U1RRK4 108 aa8.23□□□□□ -1.09
CHFR-216ENST00000538235 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
CHFR-216ENST00000538235 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
CHFR-216ENST00000538235 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
CHFR-216ENST00000538235 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
CHFR-216ENST00000538235 MAJINQ3KP22 176 aa8.23□□□□□ -1.09
CHFR-216ENST00000538235 TMEM170BQ5T4T1 132 aa8.23□□□□□ -1.09
CHFR-216ENST00000538235 TMEM238C9JI98 176 aa8.22□□□□□ -1.09
CHFR-216ENST00000538235 F8W1H4 67 aa8.22□□□□□ -1.09
CHFR-216ENST00000538235 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
CHFR-216ENST00000538235 C9orf129Q5T035 196 aaKnown RBP8.22□□□□□ -1.09
CHFR-216ENST00000538235 TRBV30A0A0K0K1B3 111 aa8.21□□□□□ -1.1
CHFR-216ENST00000538235 A0A1W2PPM0 123 aa8.21□□□□□ -1.1
CHFR-216ENST00000538235 F8WDY8 70 aa8.21□□□□□ -1.1
CHFR-216ENST00000538235 A0A1B0GV72 72 aa8.2□□□□□ -1.1
CHFR-216ENST00000538235 PRSS2P07478 247 aa8.2□□□□□ -1.1
CHFR-216ENST00000538235 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
CHFR-216ENST00000538235 LYRM7Q5U5X0 104 aa8.2□□□□□ -1.1
CHFR-216ENST00000538235 KRTAP11-1Q8IUC1 163 aa8.2□□□□□ -1.1
CHFR-216ENST00000538235 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
CHFR-216ENST00000538235 SPCS1Q9Y6A9 102 aa8.2□□□□□ -1.1
CHFR-216ENST00000538235 MYCBP2O75592 4640 aa8.19□□□□□ -1.1
CHFR-216ENST00000538235 GAGE2EQ4V326 116 aa8.19□□□□□ -1.1
CHFR-216ENST00000538235 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
CHFR-216ENST00000538235 SIGMAR1Q99720 223 aa8.19□□□□□ -1.1
CHFR-216ENST00000538235 GAGE2DQ9UEU5 116 aa8.19□□□□□ -1.1
CHFR-216ENST00000538235 NDUFC2-KCTD14E9PQ53 114 aa8.18□□□□□ -1.1
CHFR-216ENST00000538235 H3BUT2 72 aa8.18□□□□□ -1.1
CHFR-216ENST00000538235 CKS1BP61024 79 aa8.18□□□□□ -1.1
CHFR-216ENST00000538235 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
CHFR-216ENST00000538235 DPM2O94777 84 aa8.17□□□□□ -1.1
CHFR-216ENST00000538235 CXCL5P42830 114 aa8.17□□□□□ -1.1
CHFR-216ENST00000538235 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
CHFR-216ENST00000538235 Q8NDZ9 215 aa8.17□□□□□ -1.1
CHFR-216ENST00000538235 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
CHFR-216ENST00000538235 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
CHFR-216ENST00000538235 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
CHFR-216ENST00000538235 A6NJY4 79 aa8.16□□□□□ -1.1
CHFR-216ENST00000538235 IGKCP01834 107 aa8.16□□□□□ -1.1
CHFR-216ENST00000538235 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
CHFR-216ENST00000538235 PHF5AQ7RTV0 110 aaKnown RBP8.16□□□□□ -1.1
CHFR-216ENST00000538235 PLNP26678 52 aa8.15□□□□□ -1.1
CHFR-216ENST00000538235 FAM19A5Q7Z5A7 132 aaPredicted RBP8.15□□□□□ -1.1
CHFR-216ENST00000538235 Q6ZVH6 145 aa8.14□□□□□ -1.11
CHFR-216ENST00000538235 IGKV2D-26A0A0A0MRZ7 120 aa8.13□□□□□ -1.11
CHFR-216ENST00000538235 ERG28Q9UKR5 140 aa8.13□□□□□ -1.11
CHFR-216ENST00000538235 LEPROTO15243 131 aa8.12□□□□□ -1.11
CHFR-216ENST00000538235 PFN2P35080 140 aa8.12□□□□□ -1.11
CHFR-216ENST00000538235 NMUP48645 174 aa8.12□□□□□ -1.11
CHFR-216ENST00000538235 DPH3Q96FX2 82 aa8.12□□□□□ -1.11
CHFR-216ENST00000538235 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
CHFR-216ENST00000538235 RPL37AP61513 92 aaKnown RBP8.11□□□□□ -1.11
CHFR-216ENST00000538235 RPL24P83731 157 aaKnown RBP8.11□□□□□ -1.11
CHFR-216ENST00000538235 CEND1Q8N111 149 aa8.11□□□□□ -1.11
CHFR-216ENST00000538235 LINC00474Q9P2X8 69 aa8.11□□□□□ -1.11
CHFR-216ENST00000538235 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
CHFR-216ENST00000538235 A0A0U1RRA0 63 aa8.1□□□□□ -1.11
CHFR-216ENST00000538235 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
CHFR-216ENST00000538235 NDUFA12Q9UI09 145 aa8.1□□□□□ -1.11
CHFR-216ENST00000538235 E9PLD3 99 aa8.09□□□□□ -1.11
CHFR-216ENST00000538235 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
CHFR-216ENST00000538235 J3QQQ9 107 aa8.09□□□□□ -1.11
CHFR-216ENST00000538235 SND1-IT1Q9HBX3 110 aa8.09□□□□□ -1.11
CHFR-216ENST00000538235 M0QXV9 152 aa8.08□□□□□ -1.12
CHFR-216ENST00000538235 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
CHFR-216ENST00000538235 DAND5Q8N907 189 aa8.07□□□□□ -1.12
CHFR-216ENST00000538235 SVIPQ8NHG7 77 aa8.07□□□□□ -1.12
CHFR-216ENST00000538235 PLEKHB2Q96CS7 222 aa8.07□□□□□ -1.12
CHFR-216ENST00000538235 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
CHFR-216ENST00000538235 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 VPREB1P12018 145 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 RAB37Q96AX2 223 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 PSORS1C2Q9UIG4 136 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 C22orf24Q9Y442 160 aa8.06□□□□□ -1.12
CHFR-216ENST00000538235 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
CHFR-216ENST00000538235 H3BMG7 143 aa8.05□□□□□ -1.12
CHFR-216ENST00000538235 HERVK_113P61574 105 aa8.05□□□□□ -1.12
CHFR-216ENST00000538235 MIR7-3HGQ8N6C7 128 aa8.05□□□□□ -1.12
CHFR-216ENST00000538235 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
CHFR-216ENST00000538235 LITAFQ99732 161 aa8.05□□□□□ -1.12
CHFR-216ENST00000538235 SPANXDQ9BXN6 97 aa8.05□□□□□ -1.12
CHFR-216ENST00000538235 A0A0J9YXY3 114 aa8.04□□□□□ -1.12
CHFR-216ENST00000538235 ADAMTSL4-AS1Q5T5F5 129 aa8.04□□□□□ -1.12
CHFR-216ENST00000538235 SOSTDC1Q6X4U4 206 aa8.04□□□□□ -1.12
CHFR-216ENST00000538235 SPANXB1Q9NS25 103 aaPredicted RBP8.04□□□□□ -1.12
CHFR-216ENST00000538235 PLA2G2DQ9UNK4 145 aa8.04□□□□□ -1.12
CHFR-216ENST00000538235 LGALS3P17931 250 aaKnown RBP8.03□□□□□ -1.12
CHFR-216ENST00000538235 LINC00158P58513 81 aa8.03□□□□□ -1.12
CHFR-216ENST00000538235 COX17Q14061 63 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms