RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 UBR5O95071 2799 aaPredicted RBP7.62□□□□□ -1.19
CLSTN3-207ENST00000537408 K7EQD1 137 aa7.62□□□□□ -1.19
CLSTN3-207ENST00000537408 MGAM2Q2M2H8 2515 aa7.62□□□□□ -1.19
CLSTN3-207ENST00000537408 PSPHP1O15172 72 aa7.61□□□□□ -1.19
CLSTN3-207ENST00000537408 SCXQ7RTU7 201 aa7.61□□□□□ -1.19
CLSTN3-207ENST00000537408 KTN1-AS1Q86SY8 53 aa7.61□□□□□ -1.19
CLSTN3-207ENST00000537408 ASH1LQ9NR48 2969 aaKnown RBP7.6□□□□□ -1.19
CLSTN3-207ENST00000537408 C6orf223Q8N319 242 aa7.6□□□□□ -1.19
CLSTN3-207ENST00000537408 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
CLSTN3-207ENST00000537408 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
CLSTN3-207ENST00000537408 hDV103S1A0JD37 113 aa7.59□□□□□ -1.19
CLSTN3-207ENST00000537408 K7EQG2 157 aa7.59□□□□□ -1.19
CLSTN3-207ENST00000537408 NOP10Q9NPE3 64 aaKnown RBP7.59□□□□□ -1.19
CLSTN3-207ENST00000537408 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 Q6ZSN1 163 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 PSCAO43653 123 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 NDUFS5O43920 106 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 PRB2P02812 416 aaPredicted RBP7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 Q6ZTC4 211 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 LRCOL1A6NCL2 159 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 UBE2AP49459 152 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
CLSTN3-207ENST00000537408 ASPMQ8IZT6 3477 aa7.57□□□□□ -1.2
CLSTN3-207ENST00000537408 CFAP47Q6ZTR5 3102 aa7.56□□□□□ -1.2
CLSTN3-207ENST00000537408 C18orf65Q6ZTR6 163 aa7.56□□□□□ -1.2
CLSTN3-207ENST00000537408 Q9UF83 564 aa7.56□□□□□ -1.2
CLSTN3-207ENST00000537408 COL12A1Q99715 3063 aa7.56□□□□□ -1.2
CLSTN3-207ENST00000537408 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
CLSTN3-207ENST00000537408 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 DEFB114Q30KQ6 69 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 C6orf99Q4VX62 202 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 Q6ZRP5 223 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 ZFHX4Q86UP3 3567 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 HIVEP1P15822 2718 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 DCHS1Q96JQ0 3298 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 LINC00575Q6W349 94 aa7.54□□□□□ -1.2
CLSTN3-207ENST00000537408 MAP6D1Q9H9H5 199 aa7.53□□□□□ -1.2
CLSTN3-207ENST00000537408 ATMQ13315 3056 aa7.53□□□□□ -1.2
CLSTN3-207ENST00000537408 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
CLSTN3-207ENST00000537408 MUC7Q8TAX7 377 aa7.53□□□□□ -1.2
CLSTN3-207ENST00000537408 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
CLSTN3-207ENST00000537408 A0A096LPF7 62 aa7.53□□□□□ -1.2
CLSTN3-207ENST00000537408 TEX15Q9BXT5 2789 aa7.53□□□□□ -1.2
CLSTN3-207ENST00000537408 C1orf64Q8NEQ6 169 aa7.52□□□□□ -1.21
CLSTN3-207ENST00000537408 LOC400499M0QZD8 3231 aa7.51□□□□□ -1.21
CLSTN3-207ENST00000537408 CR1P17927 2039 aa7.51□□□□□ -1.21
CLSTN3-207ENST00000537408 MAP1AP78559 2803 aaPredicted RBP7.51□□□□□ -1.21
CLSTN3-207ENST00000537408 CLPSL2Q6UWE3 100 aa7.5□□□□□ -1.21
CLSTN3-207ENST00000537408 OCR1Q9BZK8 76 aa7.5□□□□□ -1.21
CLSTN3-207ENST00000537408 M0R2N4 97 aa7.5□□□□□ -1.21
CLSTN3-207ENST00000537408 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
CLSTN3-207ENST00000537408 LINC00269Q8N2A0 174 aa7.49□□□□□ -1.21
CLSTN3-207ENST00000537408 C16orf74Q96GX8 76 aa7.49□□□□□ -1.21
CLSTN3-207ENST00000537408 CD164L2Q6UWJ8 174 aa7.49□□□□□ -1.21
CLSTN3-207ENST00000537408 ANGP03950 147 aaKnown RBP7.49□□□□□ -1.21
CLSTN3-207ENST00000537408 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
CLSTN3-207ENST00000537408 Q6ZQY7 126 aa7.49□□□□□ -1.21
CLSTN3-207ENST00000537408 A8MUN3 132 aa7.48□□□□□ -1.21
CLSTN3-207ENST00000537408 LINC00588Q9Y4M8 146 aa7.48□□□□□ -1.21
CLSTN3-207ENST00000537408 APCP25054 2843 aa7.48□□□□□ -1.21
CLSTN3-207ENST00000537408 BOD1L1Q8NFC6 3051 aa7.48□□□□□ -1.21
CLSTN3-207ENST00000537408 M0R378 163 aa7.48□□□□□ -1.21
CLSTN3-207ENST00000537408 DEFB135Q30KP9 77 aa7.47□□□□□ -1.21
CLSTN3-207ENST00000537408 SMG1Q96Q15 3661 aaKnown RBP7.47□□□□□ -1.21
CLSTN3-207ENST00000537408 PRR3P79522 188 aaKnown RBP7.47□□□□□ -1.21
CLSTN3-207ENST00000537408 GYPEP15421 78 aa7.46□□□□□ -1.21
CLSTN3-207ENST00000537408 TRBV6-8A0A0A6YYG3 113 aa7.46□□□□□ -1.22
CLSTN3-207ENST00000537408 COX7BP24311 80 aa7.46□□□□□ -1.22
CLSTN3-207ENST00000537408 NANOS2P60321 138 aaKnown RBP7.46□□□□□ -1.22
CLSTN3-207ENST00000537408 IGHV4-30-4P0DP06 118 aa7.46□□□□□ -1.22
CLSTN3-207ENST00000537408 FAM30AQ9NZY2 134 aa7.46□□□□□ -1.22
CLSTN3-207ENST00000537408 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 IGLV1-51P01701 117 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 Q8N9L7 120 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 NOTCH1P46531 2555 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 ZNF73O43830 326 aaPredicted RBP7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 NDUFB1O75438 58 aa7.45□□□□□ -1.22
CLSTN3-207ENST00000537408 DEFB4AO15263 64 aa7.44□□□□□ -1.22
CLSTN3-207ENST00000537408 COX17Q14061 63 aa7.44□□□□□ -1.22
CLSTN3-207ENST00000537408 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.44□□□□□ -1.22
CLSTN3-207ENST00000537408 Q8IZM0 81 aa7.44□□□□□ -1.22
CLSTN3-207ENST00000537408 PRM2P04554 102 aa7.44□□□□□ -1.22
CLSTN3-207ENST00000537408 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
CLSTN3-207ENST00000537408 DIRC1Q969H9 104 aa7.43□□□□□ -1.22
CLSTN3-207ENST00000537408 C11orf45Q8TAV5 145 aa7.43□□□□□ -1.22
CLSTN3-207ENST00000537408 WFDC10AQ9H1F0 79 aa7.43□□□□□ -1.22
CLSTN3-207ENST00000537408 CELA1Q9UNI1 258 aa7.43□□□□□ -1.22
CLSTN3-207ENST00000537408 HCG22E2RYF7 251 aa7.42□□□□□ -1.22
CLSTN3-207ENST00000537408 WWC2-AS2Q96NR7 200 aa7.42□□□□□ -1.22
CLSTN3-207ENST00000537408 CYP4F30PQ9H0H9 118 aa7.42□□□□□ -1.22
CLSTN3-207ENST00000537408 IGLV10-54A0A075B6I4 117 aa7.42□□□□□ -1.22
CLSTN3-207ENST00000537408 PRR15LQ9BU68 103 aa7.41□□□□□ -1.22
CLSTN3-207ENST00000537408 A6NED7 52 aa7.41□□□□□ -1.22
CLSTN3-207ENST00000537408 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
CLSTN3-207ENST00000537408 PRR4Q16378 134 aa7.41□□□□□ -1.22
CLSTN3-207ENST00000537408 C7orf65Q6ZTY9 151 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms