RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 IGLV4-60A0A075B6I1 120 aa7.62□□□□□ -1.19
CLIP1-209ENST00000537178 PSPHP1O15172 72 aa7.62□□□□□ -1.19
CLIP1-209ENST00000537178 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
CLIP1-209ENST00000537178 RELNP78509 3460 aa7.62□□□□□ -1.19
CLIP1-209ENST00000537178 IGLV1-51P01701 117 aa7.62□□□□□ -1.19
CLIP1-209ENST00000537178 CRIP2P52943 208 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-209ENST00000537178 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
CLIP1-209ENST00000537178 TACC2O95359 2948 aa7.61□□□□□ -1.19
CLIP1-209ENST00000537178 IGLV5-52A0A0A0MRZ9 124 aa7.61□□□□□ -1.19
CLIP1-209ENST00000537178 hDV103S1A0JD37 113 aa7.61□□□□□ -1.19
CLIP1-209ENST00000537178 PRR3P79522 188 aaKnown RBP7.61□□□□□ -1.19
CLIP1-209ENST00000537178 C2orf48Q96LS8 159 aa7.61□□□□□ -1.19
CLIP1-209ENST00000537178 RAI1Q7Z5J4 1906 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-209ENST00000537178 AMELXQ99217 191 aa7.61□□□□□ -1.19
CLIP1-209ENST00000537178 PKD1L2Q7Z442 2459 aa7.61□□□□□ -1.19
CLIP1-209ENST00000537178 COX6A2Q02221 97 aa7.6□□□□□ -1.19
CLIP1-209ENST00000537178 LINC01556Q5JQF7 62 aa7.6□□□□□ -1.19
CLIP1-209ENST00000537178 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
CLIP1-209ENST00000537178 SETD2Q9BYW2 2564 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-209ENST00000537178 ADGRG4Q8IZF6 3080 aa7.6□□□□□ -1.19
CLIP1-209ENST00000537178 FHL2Q14192 279 aa7.59□□□□□ -1.19
CLIP1-209ENST00000537178 LRRK2Q5S007 2527 aa7.59□□□□□ -1.19
CLIP1-209ENST00000537178 A0A1B0GUV1 79 aa7.59□□□□□ -1.19
CLIP1-209ENST00000537178 ADAMTSL4-AS1Q5T5F5 129 aa7.59□□□□□ -1.19
CLIP1-209ENST00000537178 SVEP1Q4LDE5 3571 aa7.59□□□□□ -1.19
CLIP1-209ENST00000537178 HCG22E2RYF7 251 aa7.58□□□□□ -1.2
CLIP1-209ENST00000537178 Q8N2B8 174 aa7.58□□□□□ -1.2
CLIP1-209ENST00000537178 Q6ZTC4 211 aa7.58□□□□□ -1.2
CLIP1-209ENST00000537178 LINC01561Q8N1V8 128 aa7.58□□□□□ -1.2
CLIP1-209ENST00000537178 RETNLBQ9BQ08 111 aa7.58□□□□□ -1.2
CLIP1-209ENST00000537178 LIMD2Q9BT23 127 aa7.57□□□□□ -1.2
CLIP1-209ENST00000537178 ATMQ13315 3056 aa7.57□□□□□ -1.2
CLIP1-209ENST00000537178 AVPP01185 164 aa7.57□□□□□ -1.2
CLIP1-209ENST00000537178 COX8CQ7Z4L0 72 aa7.56□□□□□ -1.2
CLIP1-209ENST00000537178 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
CLIP1-209ENST00000537178 CRYGAP11844 174 aa7.55□□□□□ -1.2
CLIP1-209ENST00000537178 BRI3O95415 125 aa7.55□□□□□ -1.2
CLIP1-209ENST00000537178 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
CLIP1-209ENST00000537178 ZNF580Q9UK33 172 aa7.55□□□□□ -1.2
CLIP1-209ENST00000537178 SBSPONQ8IVN8 264 aa7.54□□□□□ -1.2
CLIP1-209ENST00000537178 C1orf64Q8NEQ6 169 aa7.54□□□□□ -1.2
CLIP1-209ENST00000537178 CXCL6P80162 114 aa7.54□□□□□ -1.2
CLIP1-209ENST00000537178 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
CLIP1-209ENST00000537178 EDN2P20800 178 aa7.54□□□□□ -1.2
CLIP1-209ENST00000537178 C1orf134Q5TEV5 83 aa7.53□□□□□ -1.2
CLIP1-209ENST00000537178 CHD8Q9HCK8 2581 aa7.53□□□□□ -1.2
CLIP1-209ENST00000537178 LYPD5Q6UWN5 251 aa7.52□□□□□ -1.21
CLIP1-209ENST00000537178 AGRNO00468 2067 aa7.52□□□□□ -1.21
CLIP1-209ENST00000537178 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
CLIP1-209ENST00000537178 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
CLIP1-209ENST00000537178 Q6ZRU5 148 aa7.51□□□□□ -1.21
CLIP1-209ENST00000537178 USP9YO00507 2555 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-209ENST00000537178 A0A096LNJ9 63 aa7.51□□□□□ -1.21
CLIP1-209ENST00000537178 ZNF575Q86XF7 245 aa7.51□□□□□ -1.21
CLIP1-209ENST00000537178 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
CLIP1-209ENST00000537178 PRLHP81277 87 aa7.5□□□□□ -1.21
CLIP1-209ENST00000537178 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
CLIP1-209ENST00000537178 C16orf95Q9H693 158 aa7.5□□□□□ -1.21
CLIP1-209ENST00000537178 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
CLIP1-209ENST00000537178 A0A1B0GU69 56 aa7.49□□□□□ -1.21
CLIP1-209ENST00000537178 A8MTW9 85 aa7.48□□□□□ -1.21
CLIP1-209ENST00000537178 Q6ZSN1 163 aa7.48□□□□□ -1.21
CLIP1-209ENST00000537178 C22orf24Q9Y442 160 aa7.48□□□□□ -1.21
CLIP1-209ENST00000537178 VPS13CQ709C8 3753 aa7.48□□□□□ -1.21
CLIP1-209ENST00000537178 PRO0628Q9UI54 55 aa7.48□□□□□ -1.21
CLIP1-209ENST00000537178 PLA2G2AP14555 144 aa7.47□□□□□ -1.21
CLIP1-209ENST00000537178 SMR3AQ99954 134 aa7.47□□□□□ -1.21
CLIP1-209ENST00000537178 BCE1O60756 84 aa7.47□□□□□ -1.21
CLIP1-209ENST00000537178 CDSNQ15517 529 aa7.47□□□□□ -1.21
CLIP1-209ENST00000537178 ASH1LQ9NR48 2969 aaKnown RBP7.47□□□□□ -1.21
CLIP1-209ENST00000537178 ACYP2P14621 99 aa7.46□□□□□ -1.21
CLIP1-209ENST00000537178 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.21
CLIP1-209ENST00000537178 A0A1B0GW54 56 aa7.46□□□□□ -1.22
CLIP1-209ENST00000537178 SPAG11AQ6PDA7 123 aa7.45□□□□□ -1.22
CLIP1-209ENST00000537178 SMIM29Q86T20 159 aa7.45□□□□□ -1.22
CLIP1-209ENST00000537178 LRBAP50851 2863 aa7.45□□□□□ -1.22
CLIP1-209ENST00000537178 IGLV5-39A0A0G2JS06 123 aa7.45□□□□□ -1.22
CLIP1-209ENST00000537178 KRTAP10-9P60411 292 aa7.45□□□□□ -1.22
CLIP1-209ENST00000537178 KIAA0087Q14695 138 aa7.45□□□□□ -1.22
CLIP1-209ENST00000537178 MGAQ8IWI9 3026 aa7.44□□□□□ -1.22
CLIP1-209ENST00000537178 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-209ENST00000537178 SPATA3Q8NHX4 192 aa7.44□□□□□ -1.22
CLIP1-209ENST00000537178 PRO3102Q9H379 93 aa7.44□□□□□ -1.22
CLIP1-209ENST00000537178 NHLRC4P0CG21 123 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-209ENST00000537178 PRO0461Q9UI25 63 aa7.43□□□□□ -1.22
CLIP1-209ENST00000537178 HRNRQ86YZ3 2850 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-209ENST00000537178 IGHV3OR16-9A0A0B4J2B5 98 aa7.43□□□□□ -1.22
CLIP1-209ENST00000537178 Q9UF83 564 aa7.42□□□□□ -1.22
CLIP1-209ENST00000537178 H3BPC8 53 aa7.42□□□□□ -1.22
CLIP1-209ENST00000537178 SERTAD4-AS1Q5TG53 156 aa7.42□□□□□ -1.22
CLIP1-209ENST00000537178 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
CLIP1-209ENST00000537178 SPACA4Q8TDM5 124 aa7.41□□□□□ -1.22
CLIP1-209ENST00000537178 ACANP16112 2415 aa7.41□□□□□ -1.22
CLIP1-209ENST00000537178 LINC00167Q96N53 147 aa7.4□□□□□ -1.22
CLIP1-209ENST00000537178 C6orf48Q9UBA6 75 aa7.4□□□□□ -1.23
CLIP1-209ENST00000537178 MOBPQ13875 183 aa7.39□□□□□ -1.23
CLIP1-209ENST00000537178 FHL3Q13643 280 aa7.39□□□□□ -1.23
CLIP1-209ENST00000537178 MTORP42345 2549 aa7.39□□□□□ -1.23
CLIP1-209ENST00000537178 ATP11AUNQ6ZP68 121 aa7.39□□□□□ -1.23
CLIP1-209ENST00000537178 C11orf72Q8NBR9 251 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms