RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 FA2HQ7L5A8 372 aa9.91□□□□□ -0.82
LTBR-206ENST00000536876 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
LTBR-206ENST00000536876 RPL24P83731 157 aaKnown RBP9.9□□□□□ -0.82
LTBR-206ENST00000536876 FP248Q71RG6 208 aaPredicted RBP9.9□□□□□ -0.82
LTBR-206ENST00000536876 ATP6V1G1O75348 118 aa9.89□□□□□ -0.83
LTBR-206ENST00000536876 S100PP25815 95 aa9.89□□□□□ -0.83
LTBR-206ENST00000536876 LINC01547P58512 204 aaPredicted RBP9.89□□□□□ -0.83
LTBR-206ENST00000536876 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
LTBR-206ENST00000536876 SPAG11AQ6PDA7 123 aa9.89□□□□□ -0.83
LTBR-206ENST00000536876 CBLN2Q8IUK8 224 aa9.89□□□□□ -0.83
LTBR-206ENST00000536876 LINC00337Q8N6G1 96 aa9.89□□□□□ -0.83
LTBR-206ENST00000536876 SMCO4Q9NRQ5 59 aa9.89□□□□□ -0.83
LTBR-206ENST00000536876 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
LTBR-206ENST00000536876 IGLC3P0DOY3 106 aa9.88□□□□□ -0.83
LTBR-206ENST00000536876 FABP9Q0Z7S8 132 aa9.86□□□□□ -0.83
LTBR-206ENST00000536876 ZNF22P17026 224 aaPredicted RBP9.85□□□□□ -0.83
LTBR-206ENST00000536876 NDUFA6P56556 154 aa9.85□□□□□ -0.83
LTBR-206ENST00000536876 COX19Q49B96 90 aa9.85□□□□□ -0.83
LTBR-206ENST00000536876 LCE2CQ5TA81 110 aa9.85□□□□□ -0.83
LTBR-206ENST00000536876 SPRR4Q96PI1 79 aa9.85□□□□□ -0.83
LTBR-206ENST00000536876 HIGD2AQ9BW72 106 aa9.85□□□□□ -0.83
LTBR-206ENST00000536876 SND1-IT1Q9HBX3 110 aa9.85□□□□□ -0.83
LTBR-206ENST00000536876 ERG28Q9UKR5 140 aa9.85□□□□□ -0.83
LTBR-206ENST00000536876 A0A096LNJ9 63 aa9.84□□□□□ -0.83
LTBR-206ENST00000536876 S100A1P23297 94 aa9.84□□□□□ -0.83
LTBR-206ENST00000536876 COX17Q14061 63 aa9.84□□□□□ -0.83
LTBR-206ENST00000536876 DAND5Q8N907 189 aa9.82□□□□□ -0.84
LTBR-206ENST00000536876 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
LTBR-206ENST00000536876 KRTAP19-2Q3LHN2 52 aa9.81□□□□□ -0.84
LTBR-206ENST00000536876 Q8NBF4 154 aa9.81□□□□□ -0.84
LTBR-206ENST00000536876 ZNF706Q9Y5V0 76 aaPredicted RBP9.81□□□□□ -0.84
LTBR-206ENST00000536876 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
LTBR-206ENST00000536876 C11orf86A6NJI1 115 aa9.79□□□□□ -0.84
LTBR-206ENST00000536876 HBDP02042 147 aa9.79□□□□□ -0.84
LTBR-206ENST00000536876 PMCHL1Q16048 86 aa9.79□□□□□ -0.84
LTBR-206ENST00000536876 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
LTBR-206ENST00000536876 C18orf32Q8TCD1 76 aa9.78□□□□□ -0.84
LTBR-206ENST00000536876 LINC00614P0C842 121 aa9.77□□□□□ -0.85
LTBR-206ENST00000536876 SEC61BP60468 96 aaKnown RBP9.77□□□□□ -0.85
LTBR-206ENST00000536876 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.85
LTBR-206ENST00000536876 BAGE3Q86Y29 109 aa9.76□□□□□ -0.85
LTBR-206ENST00000536876 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
LTBR-206ENST00000536876 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
LTBR-206ENST00000536876 SPINK1P00995 79 aa9.74□□□□□ -0.85
LTBR-206ENST00000536876 LINC00158P58513 81 aa9.74□□□□□ -0.85
LTBR-206ENST00000536876 NDUFA12Q9UI09 145 aa9.74□□□□□ -0.85
LTBR-206ENST00000536876 XP32Q5T750 250 aa9.73□□□□□ -0.85
LTBR-206ENST00000536876 MT1HP80294 61 aa9.72□□□□□ -0.85
LTBR-206ENST00000536876 Q8N377 158 aa9.72□□□□□ -0.85
LTBR-206ENST00000536876 A0A0U1RRA0 63 aa9.71□□□□□ -0.86
LTBR-206ENST00000536876 LINC00483Q53H64 154 aa9.71□□□□□ -0.86
LTBR-206ENST00000536876 KRTAP4-16G5E9R7 235 aaPredicted RBP9.7□□□□□ -0.86
LTBR-206ENST00000536876 PRYO14603 147 aa9.7□□□□□ -0.86
LTBR-206ENST00000536876 SPRR1AP35321 89 aa9.7□□□□□ -0.86
LTBR-206ENST00000536876 SMCR5Q8TEV8 140 aa9.7□□□□□ -0.86
LTBR-206ENST00000536876 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
LTBR-206ENST00000536876 ETDCA0A1B0GVM5 59 aa9.69□□□□□ -0.86
LTBR-206ENST00000536876 COLCA2A8K830 154 aa9.69□□□□□ -0.86
LTBR-206ENST00000536876 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
LTBR-206ENST00000536876 FAM19A2Q8N3H0 131 aa9.68□□□□□ -0.86
LTBR-206ENST00000536876 S100A12P80511 92 aa9.67□□□□□ -0.86
LTBR-206ENST00000536876 NCR3O14931 201 aa9.66□□□□□ -0.86
LTBR-206ENST00000536876 SMIM13P0DJ93 91 aa9.66□□□□□ -0.86
LTBR-206ENST00000536876 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
LTBR-206ENST00000536876 BOD1L2Q8IYS8 172 aa9.66□□□□□ -0.86
LTBR-206ENST00000536876 MOBPQ13875 183 aa9.65□□□□□ -0.86
LTBR-206ENST00000536876 TRAV12-1A0A0B4J245 112 aa9.64□□□□□ -0.87
LTBR-206ENST00000536876 TRGC2P03986 189 aa9.64□□□□□ -0.87
LTBR-206ENST00000536876 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
LTBR-206ENST00000536876 GAGE2AQ6NT46 116 aa9.64□□□□□ -0.87
LTBR-206ENST00000536876 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
LTBR-206ENST00000536876 KCNQ1DNQ9H478 68 aa9.64□□□□□ -0.87
LTBR-206ENST00000536876 IGLV9-49A0A0B4J1Y8 123 aa9.63□□□□□ -0.87
LTBR-206ENST00000536876 ERC2-IT1O76042 136 aa9.63□□□□□ -0.87
LTBR-206ENST00000536876 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
LTBR-206ENST00000536876 SSBP3-AS1Q7Z2R9 100 aa9.63□□□□□ -0.87
LTBR-206ENST00000536876 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
LTBR-206ENST00000536876 SLC25A20O43772 301 aa9.61□□□□□ -0.87
LTBR-206ENST00000536876 CHCHD1Q96BP2 118 aaKnown RBP9.61□□□□□ -0.87
LTBR-206ENST00000536876 TRBV10-3A0A0K0K1G6 114 aa9.6□□□□□ -0.87
LTBR-206ENST00000536876 LINC00587B1AMM8 73 aa9.6□□□□□ -0.87
LTBR-206ENST00000536876 HERV-K104P63124 156 aa9.6□□□□□ -0.87
LTBR-206ENST00000536876 KRTAP10-6P60371 365 aaPredicted RBP9.59□□□□□ -0.87
LTBR-206ENST00000536876 FLGP20930 4061 aaPredicted RBP9.57□□□□□ -0.88
LTBR-206ENST00000536876 B5MCH6 92 aa9.57□□□□□ -0.88
LTBR-206ENST00000536876 Q9BRP9 147 aa9.57□□□□□ -0.88
LTBR-206ENST00000536876 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
LTBR-206ENST00000536876 CFC1BP0CG36 223 aa9.56□□□□□ -0.88
LTBR-206ENST00000536876 MYMXA0A1B0GTQ4 84 aa9.55□□□□□ -0.88
LTBR-206ENST00000536876 TSPEAR-AS2P59090 65 aa9.55□□□□□ -0.88
LTBR-206ENST00000536876 PCOTHQ58A44 107 aa9.55□□□□□ -0.88
LTBR-206ENST00000536876 H0Y8G0 127 aa9.54□□□□□ -0.88
LTBR-206ENST00000536876 HSBP1O75506 76 aa9.54□□□□□ -0.88
LTBR-206ENST00000536876 DDTP30046 118 aa9.53□□□□□ -0.88
LTBR-206ENST00000536876 C9orf153Q5TBE3 101 aa9.53□□□□□ -0.88
LTBR-206ENST00000536876 HIST1H2BKO60814 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST1H2BJP06899 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST1H2BOP23527 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST1H2BBP33778 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST1H2BDP58876 126 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms