RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 PET117Q6UWS5 81 aa7.37□□□□□ -1.23
CCND1-202ENST00000535993 TMEM223A0PJW6 202 aa7.36□□□□□ -1.23
CCND1-202ENST00000535993 IGKCP01834 107 aa7.36□□□□□ -1.23
CCND1-202ENST00000535993 C3orf79P0CE67 100 aa7.36□□□□□ -1.23
CCND1-202ENST00000535993 HERVK_113P61574 105 aa7.36□□□□□ -1.23
CCND1-202ENST00000535993 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
CCND1-202ENST00000535993 SNRPEP62304 92 aaKnown RBP7.35□□□□□ -1.23
CCND1-202ENST00000535993 LINC01545Q5VT33 79 aa7.35□□□□□ -1.23
CCND1-202ENST00000535993 HIST1H2BLQ99880 126 aa7.35□□□□□ -1.23
CCND1-202ENST00000535993 RPL13AP40429 203 aaKnown RBP7.34□□□□□ -1.23
CCND1-202ENST00000535993 LBHQ53QV2 105 aaPredicted RBP7.34□□□□□ -1.23
CCND1-202ENST00000535993 ZNF625Q96I27 306 aaPredicted RBP7.34□□□□□ -1.23
CCND1-202ENST00000535993 C5orf52A6NGY3 159 aa7.33□□□□□ -1.24
CCND1-202ENST00000535993 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
CCND1-202ENST00000535993 SFTA2Q6UW10 78 aa7.33□□□□□ -1.24
CCND1-202ENST00000535993 TMA7Q9Y2S6 64 aaKnown RBP7.33□□□□□ -1.24
CCND1-202ENST00000535993 ZNF861PO60384 105 aa7.32□□□□□ -1.24
CCND1-202ENST00000535993 AKR1D1P51857 326 aa7.32□□□□□ -1.24
CCND1-202ENST00000535993 XAGE1AQ9HD64 81 aa7.32□□□□□ -1.24
CCND1-202ENST00000535993 C22orf24Q9Y442 160 aa7.32□□□□□ -1.24
CCND1-202ENST00000535993 COX17Q14061 63 aa7.3□□□□□ -1.24
CCND1-202ENST00000535993 PLEKHB2Q96CS7 222 aa7.3□□□□□ -1.24
CCND1-202ENST00000535993 TP73-AS1Q9UF72 201 aa7.3□□□□□ -1.24
CCND1-202ENST00000535993 ERG28Q9UKR5 140 aa7.3□□□□□ -1.24
CCND1-202ENST00000535993 LPAP08519 4548 aa7.3□□□□□ -1.24
CCND1-202ENST00000535993 LEPROTO15243 131 aa7.29□□□□□ -1.24
CCND1-202ENST00000535993 LGALS3P17931 250 aaKnown RBP7.29□□□□□ -1.24
CCND1-202ENST00000535993 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
CCND1-202ENST00000535993 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
CCND1-202ENST00000535993 E9PLD3 99 aa7.27□□□□□ -1.25
CCND1-202ENST00000535993 J3QQQ9 107 aa7.27□□□□□ -1.25
CCND1-202ENST00000535993 PFN2P35080 140 aa7.27□□□□□ -1.25
CCND1-202ENST00000535993 RPL28P46779 137 aaKnown RBP7.27□□□□□ -1.25
CCND1-202ENST00000535993 TSPEAR-AS2P59090 65 aa7.27□□□□□ -1.25
CCND1-202ENST00000535993 PRR4Q16378 134 aa7.27□□□□□ -1.25
CCND1-202ENST00000535993 NDUFA12Q9UI09 145 aa7.27□□□□□ -1.25
CCND1-202ENST00000535993 BCE1O60756 84 aa7.26□□□□□ -1.25
CCND1-202ENST00000535993 NMUP48645 174 aa7.26□□□□□ -1.25
CCND1-202ENST00000535993 HERV-K104P63124 156 aa7.26□□□□□ -1.25
CCND1-202ENST00000535993 MEIG1Q5JSS6 88 aa7.26□□□□□ -1.25
CCND1-202ENST00000535993 ATOH7Q8N100 152 aa7.26□□□□□ -1.25
CCND1-202ENST00000535993 SND1-IT1Q9HBX3 110 aa7.26□□□□□ -1.25
CCND1-202ENST00000535993 MYMXA0A1B0GTQ4 84 aa7.25□□□□□ -1.25
CCND1-202ENST00000535993 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
CCND1-202ENST00000535993 SCGB1D1O95968 90 aa7.24□□□□□ -1.25
CCND1-202ENST00000535993 VPREB1P12018 145 aa7.24□□□□□ -1.25
CCND1-202ENST00000535993 CRYGAP11844 174 aa7.23□□□□□ -1.25
CCND1-202ENST00000535993 Q8NDZ9 215 aa7.23□□□□□ -1.25
CCND1-202ENST00000535993 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
CCND1-202ENST00000535993 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
CCND1-202ENST00000535993 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
CCND1-202ENST00000535993 LINC00158P58513 81 aa7.22□□□□□ -1.25
CCND1-202ENST00000535993 NKAPP1Q8N9T2 125 aa7.22□□□□□ -1.25
CCND1-202ENST00000535993 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
CCND1-202ENST00000535993 GAGE10A6NGK3 116 aa7.21□□□□□ -1.26
CCND1-202ENST00000535993 TSPAN13O95857 204 aa7.21□□□□□ -1.26
CCND1-202ENST00000535993 SMIM13P0DJ93 91 aa7.21□□□□□ -1.26
CCND1-202ENST00000535993 ANKRD39Q53RE8 183 aa7.21□□□□□ -1.26
CCND1-202ENST00000535993 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
CCND1-202ENST00000535993 ZNF815PA8K554 130 aa7.2□□□□□ -1.26
CCND1-202ENST00000535993 UBE2AP49459 152 aa7.2□□□□□ -1.26
CCND1-202ENST00000535993 MIR7-3HGQ8N6C7 128 aa7.2□□□□□ -1.26
CCND1-202ENST00000535993 TYMSOSQ8TAI1 123 aa7.2□□□□□ -1.26
CCND1-202ENST00000535993 A0A087X002 238 aa7.19□□□□□ -1.26
CCND1-202ENST00000535993 LOC107984156A0A0G2JMH3 177 aa7.19□□□□□ -1.26
CCND1-202ENST00000535993 RPL24P83731 157 aaKnown RBP7.19□□□□□ -1.26
CCND1-202ENST00000535993 ARL17AQ8IVW1 177 aa7.19□□□□□ -1.26
CCND1-202ENST00000535993 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
CCND1-202ENST00000535993 JOSD1Q15040 202 aaPredicted RBP7.17□□□□□ -1.26
CCND1-202ENST00000535993 SCGB1D4Q6XE38 83 aa7.17□□□□□ -1.26
CCND1-202ENST00000535993 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
CCND1-202ENST00000535993 MIEN1Q9BRT3 115 aa7.17□□□□□ -1.26
CCND1-202ENST00000535993 TTTY13Q9BZ97 58 aa7.17□□□□□ -1.26
CCND1-202ENST00000535993 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
CCND1-202ENST00000535993 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
CCND1-202ENST00000535993 FAM229BQ4G0N7 80 aa7.16□□□□□ -1.26
CCND1-202ENST00000535993 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
CCND1-202ENST00000535993 A0A0U1RQV1 116 aa7.15□□□□□ -1.26
CCND1-202ENST00000535993 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
CCND1-202ENST00000535993 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
CCND1-202ENST00000535993 ANAPC11Q9NYG5 84 aa7.15□□□□□ -1.26
CCND1-202ENST00000535993 MUC2Q02817 5179 aa7.14□□□□□ -1.27
CCND1-202ENST00000535993 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
CCND1-202ENST00000535993 M0R378 163 aa7.14□□□□□ -1.27
CCND1-202ENST00000535993 TIMM17BO60830 172 aa7.14□□□□□ -1.27
CCND1-202ENST00000535993 DAND5Q8N907 189 aa7.14□□□□□ -1.27
CCND1-202ENST00000535993 LITAFQ99732 161 aa7.14□□□□□ -1.27
CCND1-202ENST00000535993 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
CCND1-202ENST00000535993 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
CCND1-202ENST00000535993 SPATA45Q537H7 98 aa7.13□□□□□ -1.27
CCND1-202ENST00000535993 PYY3Q5JQD4 70 aa7.13□□□□□ -1.27
CCND1-202ENST00000535993 ADAMTSL4-AS1Q5T5F5 129 aa7.13□□□□□ -1.27
CCND1-202ENST00000535993 TMEM126AQ9H061 195 aa7.13□□□□□ -1.27
CCND1-202ENST00000535993 NPC2P61916 151 aa7.12□□□□□ -1.27
CCND1-202ENST00000535993 SOSTDC1Q6X4U4 206 aa7.12□□□□□ -1.27
CCND1-202ENST00000535993 FAM19A1Q7Z5A9 133 aa7.12□□□□□ -1.27
CCND1-202ENST00000535993 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
CCND1-202ENST00000535993 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
CCND1-202ENST00000535993 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
CCND1-202ENST00000535993 NDUFC2O95298 119 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms