RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
CHD4-204ENST00000535810 PRR3P79522 188 aaKnown RBP5.53□□□□□ -1.52
CHD4-204ENST00000535810 GAGE2BQ13066 116 aa5.53□□□□□ -1.52
CHD4-204ENST00000535810 LINC00242Q5T6M2 205 aa5.53□□□□□ -1.52
CHD4-204ENST00000535810 AMELXQ99217 191 aa5.53□□□□□ -1.52
CHD4-204ENST00000535810 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
CHD4-204ENST00000535810 A0A087WZ39 114 aa5.52□□□□□ -1.53
CHD4-204ENST00000535810 C11orf86A6NJI1 115 aa5.52□□□□□ -1.53
CHD4-204ENST00000535810 TMEM170BQ5T4T1 132 aa5.52□□□□□ -1.53
CHD4-204ENST00000535810 BOD1L2Q8IYS8 172 aa5.52□□□□□ -1.53
CHD4-204ENST00000535810 A0A0J9YXV3 536 aa5.51□□□□□ -1.53
CHD4-204ENST00000535810 E9PLD3 99 aa5.51□□□□□ -1.53
CHD4-204ENST00000535810 UBE2D1P51668 147 aa5.51□□□□□ -1.53
CHD4-204ENST00000535810 SEC11AP67812 179 aa5.51□□□□□ -1.53
CHD4-204ENST00000535810 RPL18AQ02543 176 aaKnown RBP5.51□□□□□ -1.53
CHD4-204ENST00000535810 C10orf25Q5T742 122 aa5.51□□□□□ -1.53
CHD4-204ENST00000535810 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 TINCRA0A1B0GVN0 87 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 A0A1W2PNN7 141 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
CHD4-204ENST00000535810 F8WDY8 70 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 NDUFA1O15239 70 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 MT1HL1P0DM35 61 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 PCP4P48539 62 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 KIAA0087Q14695 138 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 SNHG12Q9BXW3 62 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
CHD4-204ENST00000535810 C6orf48Q9UBA6 75 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 TNXBP22105 4242 aa5.5□□□□□ -1.53
CHD4-204ENST00000535810 IGKV2D-26A0A0A0MRZ7 120 aa5.49□□□□□ -1.53
CHD4-204ENST00000535810 H3BRM9 83 aa5.49□□□□□ -1.53
CHD4-204ENST00000535810 ZNF22P17026 224 aaPredicted RBP5.49□□□□□ -1.53
CHD4-204ENST00000535810 BATFQ16520 125 aa5.49□□□□□ -1.53
CHD4-204ENST00000535810 C9orf116Q5BN46 136 aaPredicted RBP5.49□□□□□ -1.53
CHD4-204ENST00000535810 UNQ6190/PRO20217Q6UXQ8 127 aa5.49□□□□□ -1.53
CHD4-204ENST00000535810 PCP2Q8IVA1 136 aa5.49□□□□□ -1.53
CHD4-204ENST00000535810 HIGD1BQ9P298 99 aa5.49□□□□□ -1.53
CHD4-204ENST00000535810 TMEM223A0PJW6 202 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 LEPROTO15243 131 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 TLX1NBP0CAT3 122 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 LGALS3P17931 250 aaKnown RBP5.48□□□□□ -1.53
CHD4-204ENST00000535810 HINT1P49773 126 aaPredicted RBP5.48□□□□□ -1.53
CHD4-204ENST00000535810 HERVK_113P63121 156 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 HSD52Q0P140 79 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 COL5A1-AS1Q5SY13 56 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 Q6ZRP5 223 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 C2orf91Q6ZV80 131 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 LINC01561Q8N1V8 128 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 PLEKHB2Q96CS7 222 aa5.48□□□□□ -1.53
CHD4-204ENST00000535810 MYMXA0A1B0GTQ4 84 aa5.47□□□□□ -1.53
CHD4-204ENST00000535810 ZNF815PA8K554 130 aa5.47□□□□□ -1.53
CHD4-204ENST00000535810 C2orf82Q6UX34 121 aa5.47□□□□□ -1.53
CHD4-204ENST00000535810 TRBV30A0A0K0K1B3 111 aa5.46□□□□□ -1.54
CHD4-204ENST00000535810 FAM168BA1KXE4 195 aa5.46□□□□□ -1.54
CHD4-204ENST00000535810 J3QQQ9 107 aa5.46□□□□□ -1.54
CHD4-204ENST00000535810 TAL2Q16559 108 aa5.46□□□□□ -1.54
CHD4-204ENST00000535810 SCGB1D4Q6XE38 83 aa5.46□□□□□ -1.54
CHD4-204ENST00000535810 PHF5AQ7RTV0 110 aaKnown RBP5.46□□□□□ -1.54
CHD4-204ENST00000535810 TP73-AS1Q9UF72 201 aa5.46□□□□□ -1.54
CHD4-204ENST00000535810 IGLV5-45A0A087WSX0 123 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 A6NDN8 102 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 SRSF9Q13242 221 aaKnown RBP eCLIP5.45□□□□□ -1.54
CHD4-204ENST00000535810 GAGE2EQ4V326 116 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 BVES-AS1Q5T3Y7 98 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 SPINK6Q6UWN8 80 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 TTTY13Q9BZ97 58 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 GAGE2DQ9UEU5 116 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 CDKN2A-AS1Q9UH64 79 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
CHD4-204ENST00000535810 A4D1N5 150 aa5.44□□□□□ -1.54
CHD4-204ENST00000535810 NDUFC2-KCTD14E9PQ53 114 aa5.44□□□□□ -1.54
CHD4-204ENST00000535810 PRSS2P07478 247 aa5.44□□□□□ -1.54
CHD4-204ENST00000535810 FAM19A5Q7Z5A7 132 aaPredicted RBP5.44□□□□□ -1.54
CHD4-204ENST00000535810 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
CHD4-204ENST00000535810 Q8IZM0 81 aa5.44□□□□□ -1.54
CHD4-204ENST00000535810 LINC01600Q96MT4 127 aa5.44□□□□□ -1.54
CHD4-204ENST00000535810 TOMM7Q9P0U1 55 aa5.44□□□□□ -1.54
CHD4-204ENST00000535810 SPINK8P0C7L1 97 aa5.43□□□□□ -1.54
CHD4-204ENST00000535810 CKS1BP61024 79 aa5.43□□□□□ -1.54
CHD4-204ENST00000535810 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
CHD4-204ENST00000535810 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
CHD4-204ENST00000535810 HIST1H4GQ99525 98 aa5.43□□□□□ -1.54
CHD4-204ENST00000535810 SMIM1B2RUZ4 78 aa5.42□□□□□ -1.54
CHD4-204ENST00000535810 C6orf226Q5I0X4 101 aa5.42□□□□□ -1.54
CHD4-204ENST00000535810 C1orf137Q5JT78 98 aa5.42□□□□□ -1.54
CHD4-204ENST00000535810 REG3GQ6UW15 175 aa5.42□□□□□ -1.54
CHD4-204ENST00000535810 CEND1Q8N111 149 aa5.42□□□□□ -1.54
CHD4-204ENST00000535810 TMEM238C9JI98 176 aa5.41□□□□□ -1.54
CHD4-204ENST00000535810 M0QXV9 152 aa5.41□□□□□ -1.54
CHD4-204ENST00000535810 TRIAP1O43715 76 aa5.41□□□□□ -1.54
CHD4-204ENST00000535810 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
CHD4-204ENST00000535810 SPANXB1Q9NS25 103 aaPredicted RBP5.41□□□□□ -1.54
CHD4-204ENST00000535810 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
CHD4-204ENST00000535810 IGLV5-39A0A0G2JS06 123 aa5.4□□□□□ -1.54
CHD4-204ENST00000535810 A0A1B0GV90 55 aa5.4□□□□□ -1.54
CHD4-204ENST00000535810 CXCL5P42830 114 aa5.4□□□□□ -1.54
CHD4-204ENST00000535810 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
CHD4-204ENST00000535810 A0A0J9YXY3 114 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms