RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
PACSIN3-210ENST00000533686 MIR7-3HGQ8N6C7 128 aa10.27□□□□□ -0.77
PACSIN3-210ENST00000533686 TP73-AS1Q9UF72 201 aa10.27□□□□□ -0.77
PACSIN3-210ENST00000533686 IGLV5-37A0A075B6J1 123 aa10.26□□□□□ -0.77
PACSIN3-210ENST00000533686 M0QXV9 152 aa10.26□□□□□ -0.77
PACSIN3-210ENST00000533686 RPL37AP61513 92 aaKnown RBP10.26□□□□□ -0.77
PACSIN3-210ENST00000533686 KRTAP4-5Q9BYR2 181 aa10.26□□□□□ -0.77
PACSIN3-210ENST00000533686 C22orf24Q9Y442 160 aa10.26□□□□□ -0.77
PACSIN3-210ENST00000533686 JOSD1Q15040 202 aaPredicted RBP10.25□□□□□ -0.77
PACSIN3-210ENST00000533686 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
PACSIN3-210ENST00000533686 LOC107984156A0A0G2JMH3 177 aa10.24□□□□□ -0.77
PACSIN3-210ENST00000533686 TIMM17BO60830 172 aa10.24□□□□□ -0.77
PACSIN3-210ENST00000533686 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
PACSIN3-210ENST00000533686 RPL24P83731 157 aaKnown RBP10.24□□□□□ -0.77
PACSIN3-210ENST00000533686 LBHQ53QV2 105 aaPredicted RBP10.24□□□□□ -0.77
PACSIN3-210ENST00000533686 ARL17AQ8IVW1 177 aa10.24□□□□□ -0.77
PACSIN3-210ENST00000533686 VPREB1P12018 145 aa10.23□□□□□ -0.77
PACSIN3-210ENST00000533686 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
PACSIN3-210ENST00000533686 PCP2Q8IVA1 136 aa10.22□□□□□ -0.77
PACSIN3-210ENST00000533686 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
PACSIN3-210ENST00000533686 ADAMTSL4-AS1Q5T5F5 129 aa10.21□□□□□ -0.77
PACSIN3-210ENST00000533686 DAND5Q8N907 189 aa10.21□□□□□ -0.77
PACSIN3-210ENST00000533686 LITAFQ99732 161 aa10.21□□□□□ -0.77
PACSIN3-210ENST00000533686 UBE2BP63146 152 aa10.2□□□□□ -0.78
PACSIN3-210ENST00000533686 PRR3P79522 188 aaKnown RBP10.2□□□□□ -0.78
PACSIN3-210ENST00000533686 BOD1L2Q8IYS8 172 aa10.2□□□□□ -0.78
PACSIN3-210ENST00000533686 ABCA13Q86UQ4 5058 aa10.2□□□□□ -0.78
PACSIN3-210ENST00000533686 SCGB1D4Q6XE38 83 aa10.19□□□□□ -0.78
PACSIN3-210ENST00000533686 Q8NDZ9 215 aa10.19□□□□□ -0.78
PACSIN3-210ENST00000533686 LINC00167Q96N53 147 aa10.19□□□□□ -0.78
PACSIN3-210ENST00000533686 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
PACSIN3-210ENST00000533686 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
PACSIN3-210ENST00000533686 MIEN1Q9BRT3 115 aa10.18□□□□□ -0.78
PACSIN3-210ENST00000533686 SRRM2Q9UQ35 2752 aaKnown RBP10.16□□□□□ -0.78
PACSIN3-210ENST00000533686 TMEM238C9JI98 176 aa10.16□□□□□ -0.78
PACSIN3-210ENST00000533686 PYY3Q5JQD4 70 aa10.16□□□□□ -0.78
PACSIN3-210ENST00000533686 SPANXDQ9BXN6 97 aa10.16□□□□□ -0.78
PACSIN3-210ENST00000533686 SPANXCQ9NY87 97 aa10.16□□□□□ -0.78
PACSIN3-210ENST00000533686 M0R378 163 aa10.15□□□□□ -0.78
PACSIN3-210ENST00000533686 NDUFC2O95298 119 aa10.15□□□□□ -0.78
PACSIN3-210ENST00000533686 INAFM2P0DMQ5 153 aa10.15□□□□□ -0.78
PACSIN3-210ENST00000533686 SOSTDC1Q6X4U4 206 aa10.15□□□□□ -0.78
PACSIN3-210ENST00000533686 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
PACSIN3-210ENST00000533686 VAMP8Q9BV40 100 aa10.15□□□□□ -0.78
PACSIN3-210ENST00000533686 GAGE10A6NGK3 116 aa10.14□□□□□ -0.79
PACSIN3-210ENST00000533686 COX8AP10176 69 aa10.14□□□□□ -0.79
PACSIN3-210ENST00000533686 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
PACSIN3-210ENST00000533686 Q6ZVH6 145 aa10.14□□□□□ -0.79
PACSIN3-210ENST00000533686 PKHD1L1Q86WI1 4243 aa10.13□□□□□ -0.79
PACSIN3-210ENST00000533686 IGLV1-50A0A075B6I6 118 aa10.13□□□□□ -0.79
PACSIN3-210ENST00000533686 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
PACSIN3-210ENST00000533686 DLEU1O43261 78 aa10.13□□□□□ -0.79
PACSIN3-210ENST00000533686 SPATA45Q537H7 98 aa10.13□□□□□ -0.79
PACSIN3-210ENST00000533686 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
PACSIN3-210ENST00000533686 PAM16Q9Y3D7 125 aa10.13□□□□□ -0.79
PACSIN3-210ENST00000533686 TRBV10-2A0A0K0K1G8 114 aa10.12□□□□□ -0.79
PACSIN3-210ENST00000533686 EIF4EBP3O60516 100 aaPredicted RBP10.12□□□□□ -0.79
PACSIN3-210ENST00000533686 IFITM1P13164 125 aa10.12□□□□□ -0.79
PACSIN3-210ENST00000533686 NPC2P61916 151 aa10.12□□□□□ -0.79
PACSIN3-210ENST00000533686 COPS9Q8WXC6 57 aa10.12□□□□□ -0.79
PACSIN3-210ENST00000533686 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
PACSIN3-210ENST00000533686 SPANXB1Q9NS25 103 aaPredicted RBP10.11□□□□□ -0.79
PACSIN3-210ENST00000533686 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
PACSIN3-210ENST00000533686 NCR3O14931 201 aa10.1□□□□□ -0.79
PACSIN3-210ENST00000533686 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
PACSIN3-210ENST00000533686 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
PACSIN3-210ENST00000533686 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.79
PACSIN3-210ENST00000533686 PCLOQ9Y6V0 5065 aa10.09□□□□□ -0.79
PACSIN3-210ENST00000533686 SPINK6Q6UWN8 80 aa10.08□□□□□ -0.8
PACSIN3-210ENST00000533686 C14orf144Q96I85 54 aa10.08□□□□□ -0.8
PACSIN3-210ENST00000533686 BCE1O60756 84 aa10.07□□□□□ -0.8
PACSIN3-210ENST00000533686 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
PACSIN3-210ENST00000533686 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
PACSIN3-210ENST00000533686 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
PACSIN3-210ENST00000533686 LINC00518Q8N0U6 118 aa10.06□□□□□ -0.8
PACSIN3-210ENST00000533686 TRBV10-3A0A0K0K1G6 114 aa10.05□□□□□ -0.8
PACSIN3-210ENST00000533686 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
PACSIN3-210ENST00000533686 KCNQ1DNQ9H478 68 aa10.05□□□□□ -0.8
PACSIN3-210ENST00000533686 PRYO14603 147 aa10.04□□□□□ -0.8
PACSIN3-210ENST00000533686 ZNF861PO60384 105 aa10.04□□□□□ -0.8
PACSIN3-210ENST00000533686 IGLV6-57P01721 117 aa10.04□□□□□ -0.8
PACSIN3-210ENST00000533686 DDTP30046 118 aa10.04□□□□□ -0.8
PACSIN3-210ENST00000533686 S100A12P80511 92 aa10.03□□□□□ -0.8
PACSIN3-210ENST00000533686 S100A7L2Q5SY68 101 aa10.03□□□□□ -0.8
PACSIN3-210ENST00000533686 HIGD1BQ9P298 99 aa10.03□□□□□ -0.8
PACSIN3-210ENST00000533686 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
PACSIN3-210ENST00000533686 SPRR1AP35321 89 aa10.01□□□□□ -0.81
PACSIN3-210ENST00000533686 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
PACSIN3-210ENST00000533686 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
PACSIN3-210ENST00000533686 DIRC1Q969H9 104 aa10.01□□□□□ -0.81
PACSIN3-210ENST00000533686 CBY1Q9Y3M2 126 aa10.01□□□□□ -0.81
PACSIN3-210ENST00000533686 HIST1H4GQ99525 98 aa10□□□□□ -0.81
PACSIN3-210ENST00000533686 MYCBP2O75592 4640 aa9.99□□□□□ -0.81
PACSIN3-210ENST00000533686 UBE2AP49459 152 aa9.99□□□□□ -0.81
PACSIN3-210ENST00000533686 C2orf91Q6ZV80 131 aa9.99□□□□□ -0.81
PACSIN3-210ENST00000533686 LINC00337Q8N6G1 96 aa9.99□□□□□ -0.81
PACSIN3-210ENST00000533686 LOC105371267A0A1B0GV96 52 aa9.98□□□□□ -0.81
PACSIN3-210ENST00000533686 H0Y9J4 135 aa9.98□□□□□ -0.81
PACSIN3-210ENST00000533686 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
PACSIN3-210ENST00000533686 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms