RNA–Protein interactions for RNA: ENST00000533362.1

PUF60-222, Transcript of poly(U) binding splicing factor 60, human

TSL 5

Gene PUF60, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-222	ENST00000533362	SERTAD4-AS1	Q5TG53	156 aa		13.99	□□□□□ -0.17
PUF60-222	ENST00000533362	UBE2B	P63146	152 aa		13.98	□□□□□ -0.17
PUF60-222	ENST00000533362	SMIM13	P0DJ93	91 aa		13.97	□□□□□ -0.17
PUF60-222	ENST00000533362	RPL24	P83731	157 aa	Known RBP	13.97	□□□□□ -0.17
PUF60-222	ENST00000533362	KRTAP7-1	Q8IUC3	87 aa		13.97	□□□□□ -0.17
PUF60-222	ENST00000533362	NKAPP1	Q8N9T2	125 aa		13.97	□□□□□ -0.17
PUF60-222	ENST00000533362	C22orf24	Q9Y442	160 aa		13.97	□□□□□ -0.17
PUF60-222	ENST00000533362	IGLV5-37	A0A075B6J1	123 aa		13.95	□□□□□ -0.18
PUF60-222	ENST00000533362		A0A0U1RRA0	63 aa		13.95	□□□□□ -0.18
PUF60-222	ENST00000533362	MRPL55	Q7Z7F7	128 aa	Known RBP	13.95	□□□□□ -0.18
PUF60-222	ENST00000533362	MIR7-3HG	Q8N6C7	128 aa		13.93	□□□□□ -0.18
PUF60-222	ENST00000533362	PSORS1C2	Q9UIG4	136 aa		13.92	□□□□□ -0.18
PUF60-222	ENST00000533362	ATOH7	Q8N100	152 aa		13.91	□□□□□ -0.18
PUF60-222	ENST00000533362		A0A0J9YXY3	114 aa		13.89	□□□□□ -0.19
PUF60-222	ENST00000533362	ZNF815P	A8K554	130 aa		13.89	□□□□□ -0.19
PUF60-222	ENST00000533362	HSBP1L1	C9JCN9	74 aa		13.89	□□□□□ -0.19
PUF60-222	ENST00000533362	C1orf137	Q5JT78	98 aa		13.89	□□□□□ -0.19
PUF60-222	ENST00000533362	VPREB1	P12018	145 aa		13.88	□□□□□ -0.19
PUF60-222	ENST00000533362	MIEN1	Q9BRT3	115 aa		13.88	□□□□□ -0.19
PUF60-222	ENST00000533362	IGKV2D-26	A0A0A0MRZ7	120 aa		13.87	□□□□□ -0.19
PUF60-222	ENST00000533362	BOD1L2	Q8IYS8	172 aa		13.86	□□□□□ -0.19
PUF60-222	ENST00000533362	LINC00167	Q96N53	147 aa		13.86	□□□□□ -0.19
PUF60-222	ENST00000533362	TIMM17B	O60830	172 aa		13.85	□□□□□ -0.19
PUF60-222	ENST00000533362	SCGB1D1	O95968	90 aa		13.85	□□□□□ -0.19
PUF60-222	ENST00000533362	ANKRD39	Q53RE8	183 aa		13.85	□□□□□ -0.19
PUF60-222	ENST00000533362	SPINK6	Q6UWN8	80 aa		13.84	□□□□□ -0.19
PUF60-222	ENST00000533362	LOC107984156	A0A0G2JMH3	177 aa		13.83	□□□□□ -0.2
PUF60-222	ENST00000533362	GAGE10	A6NGK3	116 aa		13.83	□□□□□ -0.2
PUF60-222	ENST00000533362	HNRNPA3	P51991	378 aa	Known RBP	13.83	□□□□□ -0.2
PUF60-222	ENST00000533362	ARL17A	Q8IVW1	177 aa		13.83	□□□□□ -0.2
PUF60-222	ENST00000533362	FLG2	Q5D862	2391 aa	Predicted RBP	13.82	□□□□□ -0.2
PUF60-222	ENST00000533362	SCGB1D4	Q6XE38	83 aa		13.82	□□□□□ -0.2
PUF60-222	ENST00000533362	KRTAP11-1	Q8IUC1	163 aa		13.82	□□□□□ -0.2
PUF60-222	ENST00000533362	DAND5	Q8N907	189 aa		13.82	□□□□□ -0.2
PUF60-222	ENST00000533362		M0R378	163 aa		13.81	□□□□□ -0.2
PUF60-222	ENST00000533362	IGLV7-43	P04211	117 aa		13.81	□□□□□ -0.2
PUF60-222	ENST00000533362	PKHD1L1	Q86WI1	4243 aa		13.81	□□□□□ -0.2
PUF60-222	ENST00000533362	RPL37AP8	A6NKH3	93 aa		13.8	□□□□□ -0.2
PUF60-222	ENST00000533362	TTTY13	Q9BZ97	58 aa		13.79	□□□□□ -0.2
PUF60-222	ENST00000533362	TMEM238	C9JI98	176 aa		13.78	□□□□□ -0.2
PUF60-222	ENST00000533362		Q8NDZ9	215 aa		13.78	□□□□□ -0.2
PUF60-222	ENST00000533362	TMA7	Q9Y2S6	64 aa	Known RBP	13.78	□□□□□ -0.2
PUF60-222	ENST00000533362	IGLV1-50	A0A075B6I6	118 aa		13.77	□□□□□ -0.21
PUF60-222	ENST00000533362	IGKV2-28	A0A075B6P5	120 aa		13.77	□□□□□ -0.21
PUF60-222	ENST00000533362	IGKV2D-28	P01615	120 aa		13.77	□□□□□ -0.21
PUF60-222	ENST00000533362	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
PUF60-222	ENST00000533362	BCE1	O60756	84 aa		13.76	□□□□□ -0.21
PUF60-222	ENST00000533362	NDUFC2	O95298	119 aa		13.76	□□□□□ -0.21
PUF60-222	ENST00000533362	OXT	P01178	125 aa		13.76	□□□□□ -0.21
PUF60-222	ENST00000533362	ADAMTSL4-AS1	Q5T5F5	129 aa		13.76	□□□□□ -0.21
PUF60-222	ENST00000533362	COPS9	Q8WXC6	57 aa		13.76	□□□□□ -0.21
PUF60-222	ENST00000533362	LITAF	Q99732	161 aa		13.76	□□□□□ -0.21
PUF60-222	ENST00000533362	TRBV10-2	A0A0K0K1G8	114 aa		13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	NCR3	O14931	201 aa		13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	S100A12	P80511	92 aa		13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	REG3G	Q6UW15	175 aa		13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	PCP2	Q8IVA1	136 aa		13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	DIRC1	Q969H9	104 aa		13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	MYCBP2	O75592	4640 aa		13.75	□□□□□ -0.21
PUF60-222	ENST00000533362	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.74	□□□□□ -0.21
PUF60-222	ENST00000533362		Q6ZVH6	145 aa		13.73	□□□□□ -0.21
PUF60-222	ENST00000533362	RPL28	P46779	137 aa	Known RBP	13.72	□□□□□ -0.21
PUF60-222	ENST00000533362	NPC2	P61916	151 aa		13.72	□□□□□ -0.21
PUF60-222	ENST00000533362	LINC00308	Q8TCZ7	52 aa		13.72	□□□□□ -0.21
PUF60-222	ENST00000533362	SPANXD	Q9BXN6	97 aa		13.72	□□□□□ -0.21
PUF60-222	ENST00000533362	SPANXC	Q9NY87	97 aa		13.72	□□□□□ -0.21
PUF60-222	ENST00000533362	ZNF861P	O60384	105 aa		13.7	□□□□□ -0.22
PUF60-222	ENST00000533362	JOSD1	Q15040	202 aa	Predicted RBP	13.7	□□□□□ -0.22
PUF60-222	ENST00000533362	TMEM126A	Q9H061	195 aa		13.7	□□□□□ -0.22
PUF60-222	ENST00000533362		J3QL48	77 aa		13.69	□□□□□ -0.22
PUF60-222	ENST00000533362	PRY	O14603	147 aa		13.69	□□□□□ -0.22
PUF60-222	ENST00000533362	IFITM1	P13164	125 aa		13.69	□□□□□ -0.22
PUF60-222	ENST00000533362	SOSTDC1	Q6X4U4	206 aa		13.69	□□□□□ -0.22
PUF60-222	ENST00000533362		H0Y9J4	135 aa		13.68	□□□□□ -0.22
PUF60-222	ENST00000533362	UBE2A	P49459	152 aa		13.68	□□□□□ -0.22
PUF60-222	ENST00000533362	PPDPF	Q9H3Y8	114 aa		13.68	□□□□□ -0.22
PUF60-222	ENST00000533362	S100A7L2	Q5SY68	101 aa		13.67	□□□□□ -0.22
PUF60-222	ENST00000533362	CBY1	Q9Y3M2	126 aa		13.67	□□□□□ -0.22
PUF60-222	ENST00000533362	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.66	□□□□□ -0.22
PUF60-222	ENST00000533362	DDT	P30046	118 aa		13.66	□□□□□ -0.22
PUF60-222	ENST00000533362	VAMP8	Q9BV40	100 aa		13.66	□□□□□ -0.22
PUF60-222	ENST00000533362	TRBV10-3	A0A0K0K1G6	114 aa		13.65	□□□□□ -0.22
PUF60-222	ENST00000533362	KCNQ1DN	Q9H478	68 aa		13.65	□□□□□ -0.22
PUF60-222	ENST00000533362	FAM19A1	Q7Z5A9	133 aa		13.64	□□□□□ -0.23
PUF60-222	ENST00000533362	EIF4EBP3	O60516	100 aa	Predicted RBP	13.63	□□□□□ -0.23
PUF60-222	ENST00000533362	COX8A	P10176	69 aa		13.63	□□□□□ -0.23
PUF60-222	ENST00000533362	LINC00518	Q8N0U6	118 aa		13.63	□□□□□ -0.23
PUF60-222	ENST00000533362	IGLV6-57	P01721	117 aa		13.61	□□□□□ -0.23
PUF60-222	ENST00000533362	SPATA45	Q537H7	98 aa		13.61	□□□□□ -0.23
PUF60-222	ENST00000533362	PAM16	Q9Y3D7	125 aa		13.61	□□□□□ -0.23
PUF60-222	ENST00000533362	FAT3	Q8TDW7	4589 aa		13.61	□□□□□ -0.23
PUF60-222	ENST00000533362	DLEU1	O43261	78 aa		13.6	□□□□□ -0.23
PUF60-222	ENST00000533362	KRTAP13-1	Q8IUC0	172 aa		13.6	□□□□□ -0.23
PUF60-222	ENST00000533362	LINC00337	Q8N6G1	96 aa		13.6	□□□□□ -0.23
PUF60-222	ENST00000533362	LINC01600	Q96MT4	127 aa		13.6	□□□□□ -0.23
PUF60-222	ENST00000533362	ETDC	A0A1B0GVM5	59 aa		13.59	□□□□□ -0.23
PUF60-222	ENST00000533362	LRP1	Q07954	4544 aa	Known RBP	13.58	□□□□□ -0.24
PUF60-222	ENST00000533362	SPRR1A	P35321	89 aa		13.58	□□□□□ -0.24
PUF60-222	ENST00000533362	PRLH	P81277	87 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms