RNA–Protein interactions for RNA: ENST00000533328.5

SERGEF-223, Transcript of secretion regulating guanine nucleotide exchange factor, human

TSL 5

Gene SERGEF, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERGEF-223	ENST00000533328	LEPROT	O15243	131 aa		12.9	□□□□□ -0.34
SERGEF-223	ENST00000533328	LINC00167	Q96N53	147 aa		12.9	□□□□□ -0.34
SERGEF-223	ENST00000533328	NDUFA12	Q9UI09	145 aa		12.89	□□□□□ -0.35
SERGEF-223	ENST00000533328	VPREB1	P12018	145 aa		12.88	□□□□□ -0.35
SERGEF-223	ENST00000533328	HERV-K104	P63124	156 aa		12.88	□□□□□ -0.35
SERGEF-223	ENST00000533328		Q8NDZ9	215 aa		12.88	□□□□□ -0.35
SERGEF-223	ENST00000533328	LINC01600	Q96MT4	127 aa		12.88	□□□□□ -0.35
SERGEF-223	ENST00000533328	LINC00158	P58513	81 aa		12.87	□□□□□ -0.35
SERGEF-223	ENST00000533328	LINC01545	Q5VT33	79 aa		12.87	□□□□□ -0.35
SERGEF-223	ENST00000533328	PLEKHB2	Q96CS7	222 aa		12.87	□□□□□ -0.35
SERGEF-223	ENST00000533328	SMIM13	P0DJ93	91 aa		12.86	□□□□□ -0.35
SERGEF-223	ENST00000533328	PET117	Q6UWS5	81 aa		12.86	□□□□□ -0.35
SERGEF-223	ENST00000533328		A0A0U1RRA0	63 aa		12.85	□□□□□ -0.35
SERGEF-223	ENST00000533328	MYMX	A0A1B0GTQ4	84 aa		12.85	□□□□□ -0.35
SERGEF-223	ENST00000533328		J3QQQ9	107 aa		12.85	□□□□□ -0.35
SERGEF-223	ENST00000533328	C3orf79	P0CE67	100 aa		12.85	□□□□□ -0.35
SERGEF-223	ENST00000533328	HERVK_113	P61574	105 aa		12.84	□□□□□ -0.35
SERGEF-223	ENST00000533328	REG3G	Q6UW15	175 aa		12.84	□□□□□ -0.35
SERGEF-223	ENST00000533328	NKAPP1	Q8N9T2	125 aa		12.84	□□□□□ -0.35
SERGEF-223	ENST00000533328	GAGE10	A6NGK3	116 aa		12.83	□□□□□ -0.36
SERGEF-223	ENST00000533328	RPL37AP8	A6NKH3	93 aa		12.83	□□□□□ -0.36
SERGEF-223	ENST00000533328	MEIG1	Q5JSS6	88 aa		12.82	□□□□□ -0.36
SERGEF-223	ENST00000533328		E9PLD3	99 aa		12.81	□□□□□ -0.36
SERGEF-223	ENST00000533328	RPL24	P83731	157 aa	Known RBP	12.81	□□□□□ -0.36
SERGEF-223	ENST00000533328	MIR7-3HG	Q8N6C7	128 aa		12.81	□□□□□ -0.36
SERGEF-223	ENST00000533328	DIRC1	Q969H9	104 aa		12.81	□□□□□ -0.36
SERGEF-223	ENST00000533328	LINC00587	B1AMM8	73 aa		12.8	□□□□□ -0.36
SERGEF-223	ENST00000533328		H0Y9J4	135 aa		12.8	□□□□□ -0.36
SERGEF-223	ENST00000533328	NMU	P48645	174 aa		12.8	□□□□□ -0.36
SERGEF-223	ENST00000533328	KRTAP10-8	P60410	259 aa		12.8	□□□□□ -0.36
SERGEF-223	ENST00000533328	IGLV1-50	A0A075B6I6	118 aa		12.78	□□□□□ -0.36
SERGEF-223	ENST00000533328	ZNF861P	O60384	105 aa		12.78	□□□□□ -0.36
SERGEF-223	ENST00000533328	BCE1	O60756	84 aa		12.78	□□□□□ -0.36
SERGEF-223	ENST00000533328	LGALS3	P17931	250 aa	Known RBP	12.78	□□□□□ -0.36
SERGEF-223	ENST00000533328	KRTDAP	P60985	99 aa		12.77	□□□□□ -0.37
SERGEF-223	ENST00000533328	IGKV2-28	A0A075B6P5	120 aa		12.75	□□□□□ -0.37
SERGEF-223	ENST00000533328	LOC107984156	A0A0G2JMH3	177 aa		12.75	□□□□□ -0.37
SERGEF-223	ENST00000533328	IGKV2D-28	P01615	120 aa		12.75	□□□□□ -0.37
SERGEF-223	ENST00000533328	ARL17A	Q8IVW1	177 aa		12.75	□□□□□ -0.37
SERGEF-223	ENST00000533328	KRTAP1-4	P0C5Y4	121 aa		12.74	□□□□□ -0.37
SERGEF-223	ENST00000533328	KRTAP13-1	Q8IUC0	172 aa		12.74	□□□□□ -0.37
SERGEF-223	ENST00000533328	HIST3H2BB	Q8N257	126 aa		12.74	□□□□□ -0.37
SERGEF-223	ENST00000533328		A0A0J9YXY3	114 aa		12.73	□□□□□ -0.37
SERGEF-223	ENST00000533328	BOD1L2	Q8IYS8	172 aa		12.73	□□□□□ -0.37
SERGEF-223	ENST00000533328	DAND5	Q8N907	189 aa		12.73	□□□□□ -0.37
SERGEF-223	ENST00000533328	IGKV2D-26	A0A0A0MRZ7	120 aa		12.72	□□□□□ -0.37
SERGEF-223	ENST00000533328	HMCN2	Q8NDA2	5059 aa		12.72	□□□□□ -0.37
SERGEF-223	ENST00000533328		M0R378	163 aa		12.71	□□□□□ -0.37
SERGEF-223	ENST00000533328	TMEM238	C9JI98	176 aa		12.7	□□□□□ -0.38
SERGEF-223	ENST00000533328	RPL28	P46779	137 aa	Known RBP	12.7	□□□□□ -0.38
SERGEF-223	ENST00000533328	TMEM126A	Q9H061	195 aa		12.7	□□□□□ -0.38
SERGEF-223	ENST00000533328	ADAMTSL4-AS1	Q5T5F5	129 aa		12.69	□□□□□ -0.38
SERGEF-223	ENST00000533328	HIST1H2BL	Q99880	126 aa		12.69	□□□□□ -0.38
SERGEF-223	ENST00000533328	C20orf202	A1L168	122 aa		12.67	□□□□□ -0.38
SERGEF-223	ENST00000533328	LITAF	Q99732	161 aa		12.67	□□□□□ -0.38
SERGEF-223	ENST00000533328	NCR3	O14931	201 aa		12.66	□□□□□ -0.38
SERGEF-223	ENST00000533328	EIF4EBP3	O60516	100 aa	Predicted RBP	12.66	□□□□□ -0.38
SERGEF-223	ENST00000533328	SOSTDC1	Q6X4U4	206 aa		12.66	□□□□□ -0.38
SERGEF-223	ENST00000533328	PRR26	Q8N8Z3	221 aa		12.66	□□□□□ -0.38
SERGEF-223	ENST00000533328	TTTY13	Q9BZ97	58 aa		12.66	□□□□□ -0.38
SERGEF-223	ENST00000533328	ANKRD39	Q53RE8	183 aa		12.65	□□□□□ -0.38
SERGEF-223	ENST00000533328	ATOH7	Q8N100	152 aa		12.64	□□□□□ -0.39
SERGEF-223	ENST00000533328	S100A2	P29034	98 aa		12.63	□□□□□ -0.39
SERGEF-223	ENST00000533328	UBE2A	P49459	152 aa		12.63	□□□□□ -0.39
SERGEF-223	ENST00000533328	ZNF815P	A8K554	130 aa		12.62	□□□□□ -0.39
SERGEF-223	ENST00000533328	TIMM17B	O60830	172 aa		12.62	□□□□□ -0.39
SERGEF-223	ENST00000533328	S100A6	P06703	90 aa		12.62	□□□□□ -0.39
SERGEF-223	ENST00000533328	PRLH	P81277	87 aa		12.62	□□□□□ -0.39
SERGEF-223	ENST00000533328	FAM19A1	Q7Z5A9	133 aa		12.62	□□□□□ -0.39
SERGEF-223	ENST00000533328	KCNQ1DN	Q9H478	68 aa		12.62	□□□□□ -0.39
SERGEF-223	ENST00000533328	TRBV10-2	A0A0K0K1G8	114 aa		12.61	□□□□□ -0.39
SERGEF-223	ENST00000533328	NDUFC2	O95298	119 aa		12.61	□□□□□ -0.39
SERGEF-223	ENST00000533328	SNRPE	P62304	92 aa	Known RBP	12.61	□□□□□ -0.39
SERGEF-223	ENST00000533328	TRBV10-3	A0A0K0K1G6	114 aa		12.6	□□□□□ -0.39
SERGEF-223	ENST00000533328	PRY	O14603	147 aa		12.6	□□□□□ -0.39
SERGEF-223	ENST00000533328	SPRR1A	P35321	89 aa		12.6	□□□□□ -0.39
SERGEF-223	ENST00000533328	AKR1D1	P51857	326 aa		12.6	□□□□□ -0.39
SERGEF-223	ENST00000533328	C5orf52	A6NGY3	159 aa		12.59	□□□□□ -0.39
SERGEF-223	ENST00000533328	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	12.59	□□□□□ -0.39
SERGEF-223	ENST00000533328	NPC2	P61916	151 aa		12.59	□□□□□ -0.39
SERGEF-223	ENST00000533328	MIEN1	Q9BRT3	115 aa		12.59	□□□□□ -0.39
SERGEF-223	ENST00000533328	SPANXB1	Q9NS25	103 aa	Predicted RBP	12.58	□□□□□ -0.4
SERGEF-223	ENST00000533328	LINC00308	Q8TCZ7	52 aa		12.57	□□□□□ -0.4
SERGEF-223	ENST00000533328	LINC00337	Q8N6G1	96 aa		12.56	□□□□□ -0.4
SERGEF-223	ENST00000533328	PCP2	Q8IVA1	136 aa		12.55	□□□□□ -0.4
SERGEF-223	ENST00000533328	IGLV6-57	P01721	117 aa		12.54	□□□□□ -0.4
SERGEF-223	ENST00000533328	DDT	P30046	118 aa		12.54	□□□□□ -0.4
SERGEF-223	ENST00000533328		A0A087X002	238 aa		12.53	□□□□□ -0.4
SERGEF-223	ENST00000533328	RPL13A	P40429	203 aa	Known RBP	12.52	□□□□□ -0.41
SERGEF-223	ENST00000533328	ANAPC11	Q9NYG5	84 aa		12.52	□□□□□ -0.41
SERGEF-223	ENST00000533328	SPANXD	Q9BXN6	97 aa		12.51	□□□□□ -0.41
SERGEF-223	ENST00000533328	SPANXC	Q9NY87	97 aa		12.51	□□□□□ -0.41
SERGEF-223	ENST00000533328	HIGD2A	Q9BW72	106 aa		12.5	□□□□□ -0.41
SERGEF-223	ENST00000533328	SCGB1D4	Q6XE38	83 aa		12.49	□□□□□ -0.41
SERGEF-223	ENST00000533328		B5MCH6	92 aa		12.48	□□□□□ -0.41
SERGEF-223	ENST00000533328	CRYGA	P11844	174 aa		12.48	□□□□□ -0.41
SERGEF-223	ENST00000533328	FAM229B	Q4G0N7	80 aa		12.48	□□□□□ -0.41
SERGEF-223	ENST00000533328	S100A7L2	Q5SY68	101 aa		12.48	□□□□□ -0.41
SERGEF-223	ENST00000533328	ETDC	A0A1B0GVM5	59 aa		12.47	□□□□□ -0.41
SERGEF-223	ENST00000533328	KRTAP13-2	Q52LG2	175 aa		12.47	□□□□□ -0.41

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