RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 SMIM1B2RUZ4 78 aa13.84□□□□□ -0.19
PKP3-210ENST00000533249 H0Y9J4 135 aa13.84□□□□□ -0.19
PKP3-210ENST00000533249 LPAP08519 4548 aa13.84□□□□□ -0.19
PKP3-210ENST00000533249 C6orf226Q5I0X4 101 aa13.83□□□□□ -0.2
PKP3-210ENST00000533249 PYY3Q5JQD4 70 aa13.83□□□□□ -0.2
PKP3-210ENST00000533249 PLEKHB2Q96CS7 222 aa13.82□□□□□ -0.2
PKP3-210ENST00000533249 M0QXV9 152 aa13.81□□□□□ -0.2
PKP3-210ENST00000533249 UBE2BP63146 152 aa13.81□□□□□ -0.2
PKP3-210ENST00000533249 KIAA0087Q14695 138 aa13.81□□□□□ -0.2
PKP3-210ENST00000533249 KRTAP7-1Q8IUC3 87 aa13.81□□□□□ -0.2
PKP3-210ENST00000533249 COX7B2Q8TF08 81 aa13.81□□□□□ -0.2
PKP3-210ENST00000533249 VAMP8Q9BV40 100 aa13.81□□□□□ -0.2
PKP3-210ENST00000533249 LEPROTO15243 131 aa13.8□□□□□ -0.2
PKP3-210ENST00000533249 IGLV5-39A0A0G2JS06 123 aa13.79□□□□□ -0.2
PKP3-210ENST00000533249 LGALS3P17931 250 aaKnown RBP13.79□□□□□ -0.2
PKP3-210ENST00000533249 CKS1BP61024 79 aa13.79□□□□□ -0.2
PKP3-210ENST00000533249 C2orf82Q6UX34 121 aa13.79□□□□□ -0.2
PKP3-210ENST00000533249 E9PLD3 99 aa13.78□□□□□ -0.2
PKP3-210ENST00000533249 S100A12P80511 92 aa13.78□□□□□ -0.2
PKP3-210ENST00000533249 Q8IZM0 81 aa13.78□□□□□ -0.2
PKP3-210ENST00000533249 IGLV1-50A0A075B6I6 118 aa13.77□□□□□ -0.21
PKP3-210ENST00000533249 NMUP48645 174 aa13.77□□□□□ -0.21
PKP3-210ENST00000533249 TRBV30A0A0K0K1B3 111 aa13.76□□□□□ -0.21
PKP3-210ENST00000533249 J3QQQ9 107 aa13.76□□□□□ -0.21
PKP3-210ENST00000533249 ANKRD39Q53RE8 183 aa13.76□□□□□ -0.21
PKP3-210ENST00000533249 PAM16Q9Y3D7 125 aa13.76□□□□□ -0.21
PKP3-210ENST00000533249 NDUFC2-KCTD14E9PQ53 114 aa13.75□□□□□ -0.21
PKP3-210ENST00000533249 KRTAP1-4P0C5Y4 121 aa13.75□□□□□ -0.21
PKP3-210ENST00000533249 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
PKP3-210ENST00000533249 CXCL5P42830 114 aa13.74□□□□□ -0.21
PKP3-210ENST00000533249 SPATA45Q537H7 98 aa13.74□□□□□ -0.21
PKP3-210ENST00000533249 C9orf129Q5T035 196 aaKnown RBP13.74□□□□□ -0.21
PKP3-210ENST00000533249 NDUFA12Q9UI09 145 aa13.72□□□□□ -0.21
PKP3-210ENST00000533249 MYMXA0A1B0GTQ4 84 aa13.71□□□□□ -0.21
PKP3-210ENST00000533249 SFTA2Q6UW10 78 aa13.71□□□□□ -0.21
PKP3-210ENST00000533249 IGKV2D-26A0A0A0MRZ7 120 aa13.7□□□□□ -0.22
PKP3-210ENST00000533249 TSPEAR-AS2P59090 65 aa13.69□□□□□ -0.22
PKP3-210ENST00000533249 ZNF815PA8K554 130 aa13.68□□□□□ -0.22
PKP3-210ENST00000533249 RPL13AP40429 203 aaKnown RBP13.67□□□□□ -0.22
PKP3-210ENST00000533249 PRR4Q16378 134 aa13.67□□□□□ -0.22
PKP3-210ENST00000533249 HERV-K104P63124 156 aa13.66□□□□□ -0.22
PKP3-210ENST00000533249 ZNF625Q96I27 306 aaPredicted RBP13.66□□□□□ -0.22
PKP3-210ENST00000533249 MEIG1Q5JSS6 88 aa13.65□□□□□ -0.22
PKP3-210ENST00000533249 PCP2Q8IVA1 136 aa13.64□□□□□ -0.23
PKP3-210ENST00000533249 C12orf57Q99622 126 aa13.64□□□□□ -0.23
PKP3-210ENST00000533249 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
PKP3-210ENST00000533249 XAGE1AQ9HD64 81 aa13.64□□□□□ -0.23
PKP3-210ENST00000533249 ZNF861PO60384 105 aa13.63□□□□□ -0.23
PKP3-210ENST00000533249 SCGB1D4Q6XE38 83 aa13.63□□□□□ -0.23
PKP3-210ENST00000533249 C14orf144Q96I85 54 aa13.63□□□□□ -0.23
PKP3-210ENST00000533249 C22orf24Q9Y442 160 aa13.63□□□□□ -0.23
PKP3-210ENST00000533249 LINC00587B1AMM8 73 aa13.62□□□□□ -0.23
PKP3-210ENST00000533249 COX8AP10176 69 aa13.61□□□□□ -0.23
PKP3-210ENST00000533249 SLC25A34Q6PIV7 304 aa13.6□□□□□ -0.23
PKP3-210ENST00000533249 PFN2P35080 140 aa13.59□□□□□ -0.23
PKP3-210ENST00000533249 LINC00158P58513 81 aa13.59□□□□□ -0.23
PKP3-210ENST00000533249 LBHQ53QV2 105 aaPredicted RBP13.59□□□□□ -0.23
PKP3-210ENST00000533249 ERG28Q9UKR5 140 aa13.59□□□□□ -0.23
PKP3-210ENST00000533249 A0A0J9YXY3 114 aa13.57□□□□□ -0.24
PKP3-210ENST00000533249 A0A0U1RRA0 63 aa13.57□□□□□ -0.24
PKP3-210ENST00000533249 LINC00518Q8N0U6 118 aa13.57□□□□□ -0.24
PKP3-210ENST00000533249 TSPAN13O95857 204 aa13.56□□□□□ -0.24
PKP3-210ENST00000533249 BOD1L2Q8IYS8 172 aa13.56□□□□□ -0.24
PKP3-210ENST00000533249 DLEU1O43261 78 aa13.55□□□□□ -0.24
PKP3-210ENST00000533249 SMIM13P0DJ93 91 aa13.55□□□□□ -0.24
PKP3-210ENST00000533249 COX17Q14061 63 aa13.55□□□□□ -0.24
PKP3-210ENST00000533249 MRPL55Q7Z7F7 128 aaKnown RBP13.54□□□□□ -0.24
PKP3-210ENST00000533249 PRO1933Q9H354 126 aa13.54□□□□□ -0.24
PKP3-210ENST00000533249 UQCR10Q9UDW1 63 aa13.53□□□□□ -0.24
PKP3-210ENST00000533249 TMEM238C9JI98 176 aa13.52□□□□□ -0.25
PKP3-210ENST00000533249 RPL28P46779 137 aaKnown RBP13.52□□□□□ -0.25
PKP3-210ENST00000533249 TP73-AS1Q9UF72 201 aa13.52□□□□□ -0.25
PKP3-210ENST00000533249 TIMM17BO60830 172 aa13.51□□□□□ -0.25
PKP3-210ENST00000533249 A0A087X002 238 aa13.5□□□□□ -0.25
PKP3-210ENST00000533249 TSTD3H0UI37 97 aa13.5□□□□□ -0.25
PKP3-210ENST00000533249 BCE1O60756 84 aa13.5□□□□□ -0.25
PKP3-210ENST00000533249 MUC2Q02817 5179 aa13.49□□□□□ -0.25
PKP3-210ENST00000533249 RPL37AP8A6NKH3 93 aa13.48□□□□□ -0.25
PKP3-210ENST00000533249 MIR7-3HGQ8N6C7 128 aa13.48□□□□□ -0.25
PKP3-210ENST00000533249 GAGE10A6NGK3 116 aa13.47□□□□□ -0.25
PKP3-210ENST00000533249 DAND5Q8N907 189 aa13.47□□□□□ -0.25
PKP3-210ENST00000533249 TYMSOSQ8TAI1 123 aa13.47□□□□□ -0.25
PKP3-210ENST00000533249 LINC00167Q96N53 147 aa13.47□□□□□ -0.25
PKP3-210ENST00000533249 MIEN1Q9BRT3 115 aa13.47□□□□□ -0.25
PKP3-210ENST00000533249 CRYGAP11844 174 aa13.46□□□□□ -0.25
PKP3-210ENST00000533249 COPS9Q8WXC6 57 aa13.45□□□□□ -0.26
PKP3-210ENST00000533249 HIST1H4GQ99525 98 aa13.45□□□□□ -0.26
PKP3-210ENST00000533249 NPC2P61916 151 aa13.44□□□□□ -0.26
PKP3-210ENST00000533249 ADAMTSL4-AS1Q5T5F5 129 aa13.44□□□□□ -0.26
PKP3-210ENST00000533249 SND1-IT1Q9HBX3 110 aa13.44□□□□□ -0.26
PKP3-210ENST00000533249 ANAPC11Q9NYG5 84 aa13.44□□□□□ -0.26
PKP3-210ENST00000533249 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
PKP3-210ENST00000533249 Q6ZVH6 145 aa13.43□□□□□ -0.26
PKP3-210ENST00000533249 LITAFQ99732 161 aa13.42□□□□□ -0.26
PKP3-210ENST00000533249 SPANXDQ9BXN6 97 aa13.42□□□□□ -0.26
PKP3-210ENST00000533249 SPANXCQ9NY87 97 aa13.42□□□□□ -0.26
PKP3-210ENST00000533249 SPANXB1Q9NS25 103 aaPredicted RBP13.41□□□□□ -0.26
PKP3-210ENST00000533249 A0A0U1RQV1 116 aa13.4□□□□□ -0.26
PKP3-210ENST00000533249 IFITM1P13164 125 aa13.4□□□□□ -0.26
PKP3-210ENST00000533249 C2orf91Q6ZV80 131 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms