RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CKS1BP61024 79 aa7.24□□□□□ -1.25
TRAPPC4-213ENST00000533149 C2orf82Q6UX34 121 aa7.24□□□□□ -1.25
TRAPPC4-213ENST00000533149 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
TRAPPC4-213ENST00000533149 ZNF561-AS1K7EIQ3 104 aa7.23□□□□□ -1.25
TRAPPC4-213ENST00000533149 HERV-K104P63124 156 aa7.23□□□□□ -1.25
TRAPPC4-213ENST00000533149 HIGD1BQ9P298 99 aa7.23□□□□□ -1.25
TRAPPC4-213ENST00000533149 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC4-213ENST00000533149 CTAG1AP78358 180 aa7.22□□□□□ -1.25
TRAPPC4-213ENST00000533149 UNQ6190/PRO20217Q6UXQ8 127 aa7.22□□□□□ -1.25
TRAPPC4-213ENST00000533149 CXCL5P42830 114 aa7.21□□□□□ -1.26
TRAPPC4-213ENST00000533149 C10orf25Q5T742 122 aa7.21□□□□□ -1.26
TRAPPC4-213ENST00000533149 SFTA2Q6UW10 78 aa7.21□□□□□ -1.26
TRAPPC4-213ENST00000533149 C2orf48Q96LS8 159 aa7.21□□□□□ -1.26
TRAPPC4-213ENST00000533149 TNXBP22105 4242 aa7.2□□□□□ -1.26
TRAPPC4-213ENST00000533149 F8WDY8 70 aa7.2□□□□□ -1.26
TRAPPC4-213ENST00000533149 CAMK2N2Q96S95 79 aa7.2□□□□□ -1.26
TRAPPC4-213ENST00000533149 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 TIMM17BO60830 172 aa7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 SMIM13P0DJ93 91 aa7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 SRSF9Q13242 221 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 CIRBPQ14011 172 aaKnown RBP7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 C14orf177Q52M58 125 aa7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 ADAMTSL4-AS1Q5T5F5 129 aa7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 LITAFQ99732 161 aa7.19□□□□□ -1.26
TRAPPC4-213ENST00000533149 LINC00587B1AMM8 73 aa7.18□□□□□ -1.26
TRAPPC4-213ENST00000533149 SLPIP03973 132 aa7.18□□□□□ -1.26
TRAPPC4-213ENST00000533149 LINC00158P58513 81 aa7.18□□□□□ -1.26
TRAPPC4-213ENST00000533149 SYCNQ0VAF6 134 aa7.18□□□□□ -1.26
TRAPPC4-213ENST00000533149 LINC01600Q96MT4 127 aa7.18□□□□□ -1.26
TRAPPC4-213ENST00000533149 HIST1H4GQ99525 98 aa7.18□□□□□ -1.26
TRAPPC4-213ENST00000533149 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC4-213ENST00000533149 TMEM238C9JI98 176 aa7.17□□□□□ -1.26
TRAPPC4-213ENST00000533149 PFN2P35080 140 aa7.17□□□□□ -1.26
TRAPPC4-213ENST00000533149 HSD52Q0P140 79 aa7.17□□□□□ -1.26
TRAPPC4-213ENST00000533149 TAL2Q16559 108 aa7.17□□□□□ -1.26
TRAPPC4-213ENST00000533149 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC4-213ENST00000533149 C6orf48Q9UBA6 75 aa7.17□□□□□ -1.26
TRAPPC4-213ENST00000533149 ERG28Q9UKR5 140 aa7.17□□□□□ -1.26
TRAPPC4-213ENST00000533149 TRBV30A0A0K0K1B3 111 aa7.15□□□□□ -1.26
TRAPPC4-213ENST00000533149 A0A0U1RQV1 116 aa7.15□□□□□ -1.26
TRAPPC4-213ENST00000533149 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC4-213ENST00000533149 MUSTN1Q8IVN3 82 aa7.15□□□□□ -1.26
TRAPPC4-213ENST00000533149 DAND5Q8N907 189 aa7.15□□□□□ -1.26
TRAPPC4-213ENST00000533149 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
TRAPPC4-213ENST00000533149 SPANXCQ9NY87 97 aa7.15□□□□□ -1.26
TRAPPC4-213ENST00000533149 COX17Q14061 63 aa7.14□□□□□ -1.27
TRAPPC4-213ENST00000533149 RNF151Q2KHN1 245 aa7.14□□□□□ -1.27
TRAPPC4-213ENST00000533149 Q6ZVH6 145 aa7.14□□□□□ -1.27
TRAPPC4-213ENST00000533149 CEND1Q8N111 149 aa7.14□□□□□ -1.27
TRAPPC4-213ENST00000533149 MIR7-3HGQ8N6C7 128 aa7.14□□□□□ -1.27
TRAPPC4-213ENST00000533149 CARD19Q96LW7 228 aa7.14□□□□□ -1.27
TRAPPC4-213ENST00000533149 IFITM1P13164 125 aa7.13□□□□□ -1.27
TRAPPC4-213ENST00000533149 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
TRAPPC4-213ENST00000533149 LINC00308Q8TCZ7 52 aa7.13□□□□□ -1.27
TRAPPC4-213ENST00000533149 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC4-213ENST00000533149 A6NJY4 79 aa7.12□□□□□ -1.27
TRAPPC4-213ENST00000533149 M0R143 59 aa7.12□□□□□ -1.27
TRAPPC4-213ENST00000533149 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC4-213ENST00000533149 NPC2P61916 151 aa7.12□□□□□ -1.27
TRAPPC4-213ENST00000533149 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
TRAPPC4-213ENST00000533149 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
TRAPPC4-213ENST00000533149 FXYD2P54710 66 aa7.11□□□□□ -1.27
TRAPPC4-213ENST00000533149 BATFQ16520 125 aa7.11□□□□□ -1.27
TRAPPC4-213ENST00000533149 SOSTDC1Q6X4U4 206 aa7.11□□□□□ -1.27
TRAPPC4-213ENST00000533149 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
TRAPPC4-213ENST00000533149 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
TRAPPC4-213ENST00000533149 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC4-213ENST00000533149 NDUFC2-KCTD14E9PQ53 114 aa7.1□□□□□ -1.27
TRAPPC4-213ENST00000533149 SND1-IT1Q9HBX3 110 aa7.1□□□□□ -1.27
TRAPPC4-213ENST00000533149 A4D1N5 150 aa7.09□□□□□ -1.27
TRAPPC4-213ENST00000533149 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
TRAPPC4-213ENST00000533149 RPL24P83731 157 aaKnown RBP7.09□□□□□ -1.27
TRAPPC4-213ENST00000533149 COPS9Q8WXC6 57 aa7.09□□□□□ -1.27
TRAPPC4-213ENST00000533149 PANO1I0J062 215 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 TLX1NBP0CAT3 122 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 GAGE2EQ4V326 116 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 SDIM1Q6ZPB5 146 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 Q6ZRP5 223 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 DPH3Q96FX2 82 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 GAGE2DQ9UEU5 116 aa7.08□□□□□ -1.28
TRAPPC4-213ENST00000533149 LOC107984156A0A0G2JMH3 177 aa7.07□□□□□ -1.28
TRAPPC4-213ENST00000533149 LOC107984640A0A0U1RRK4 108 aa7.07□□□□□ -1.28
TRAPPC4-213ENST00000533149 ARL17AQ8IVW1 177 aa7.07□□□□□ -1.28
TRAPPC4-213ENST00000533149 C7orf33Q8WU49 177 aa7.07□□□□□ -1.28
TRAPPC4-213ENST00000533149 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
TRAPPC4-213ENST00000533149 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
TRAPPC4-213ENST00000533149 RPL18AQ02543 176 aaKnown RBP7.06□□□□□ -1.28
TRAPPC4-213ENST00000533149 REG3GQ6UW15 175 aa7.06□□□□□ -1.28
TRAPPC4-213ENST00000533149 NHP2Q9NX24 153 aaKnown RBP7.06□□□□□ -1.28
TRAPPC4-213ENST00000533149 A6NDN8 102 aa7.05□□□□□ -1.28
TRAPPC4-213ENST00000533149 CFC1BP0CG36 223 aa7.05□□□□□ -1.28
TRAPPC4-213ENST00000533149 CFC1P0CG37 223 aa7.05□□□□□ -1.28
TRAPPC4-213ENST00000533149 GAGE2BQ13066 116 aa7.05□□□□□ -1.28
TRAPPC4-213ENST00000533149 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
TRAPPC4-213ENST00000533149 A0A087WYN8 130 aa7.03□□□□□ -1.28
TRAPPC4-213ENST00000533149 K7ERJ3 54 aa7.03□□□□□ -1.28
TRAPPC4-213ENST00000533149 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
TRAPPC4-213ENST00000533149 COL5A1-AS1Q5SY13 56 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms