RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 NIPBLQ6KC79 2804 aaeCLIP3.88□□□□□ -1.79
ATPAF1-210ENST00000532925 A0A0U1RRA0 63 aa3.87□□□□□ -1.79
ATPAF1-210ENST00000532925 DEFB4AO15263 64 aa3.87□□□□□ -1.79
ATPAF1-210ENST00000532925 KRTAP10-11P60412 298 aa3.87□□□□□ -1.79
ATPAF1-210ENST00000532925 LYPD5Q6UWN5 251 aa3.87□□□□□ -1.79
ATPAF1-210ENST00000532925 CLEC2BQ92478 149 aa3.87□□□□□ -1.79
ATPAF1-210ENST00000532925 VWFP04275 2813 aa3.87□□□□□ -1.79
ATPAF1-210ENST00000532925 TRRAPQ9Y4A5 3859 aa3.87□□□□□ -1.79
ATPAF1-210ENST00000532925 TENM1Q9UKZ4 2725 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 SPAG11BQ08648 103 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 KPRPQ5T749 579 aaPredicted RBP3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 Q6Q795 121 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 C15orf53Q8NAA6 179 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 SMIM11BQ8TCY0 68 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 TMEM126AQ9H061 195 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
ATPAF1-210ENST00000532925 H3BQ85 93 aa3.85□□□□□ -1.79
ATPAF1-210ENST00000532925 DNAL4O96015 105 aa3.85□□□□□ -1.79
ATPAF1-210ENST00000532925 PFN2P35080 140 aa3.85□□□□□ -1.79
ATPAF1-210ENST00000532925 CLPSL2Q6UWE3 100 aa3.85□□□□□ -1.79
ATPAF1-210ENST00000532925 ENHOQ6UWT2 76 aa3.85□□□□□ -1.79
ATPAF1-210ENST00000532925 C2orf48Q96LS8 159 aa3.85□□□□□ -1.79
ATPAF1-210ENST00000532925 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
ATPAF1-210ENST00000532925 TEX49A0A1B0GTD5 131 aa3.84□□□□□ -1.79
ATPAF1-210ENST00000532925 SNCGO76070 127 aa3.84□□□□□ -1.79
ATPAF1-210ENST00000532925 HTN3P15516 51 aa3.84□□□□□ -1.79
ATPAF1-210ENST00000532925 Q6ZTC4 211 aa3.84□□□□□ -1.79
ATPAF1-210ENST00000532925 OBSCN-AS1Q96MR7 158 aa3.84□□□□□ -1.79
ATPAF1-210ENST00000532925 KLK12Q9UKR0 248 aa3.84□□□□□ -1.79
ATPAF1-210ENST00000532925 TRAV10A0A0B4J240 114 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 BAALC-AS2P0C853 105 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 DNAH10OSP0CZ25 163 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 XGP55808 180 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 KRTAP26-1Q6PEX3 210 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 SDIM1Q6ZPB5 146 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 C11orf45Q8TAV5 145 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 TM2D3Q9BRN9 247 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 IMUPQ9GZP8 106 aa3.83□□□□□ -1.8
ATPAF1-210ENST00000532925 IGLV10-54A0A075B6I4 117 aa3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 DEFB131BA0A096LNP1 70 aa3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 TRBV7-6A0A0J9YX20 115 aa3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 A0A1B0GV72 72 aa3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 NANOS2P60321 138 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 WFDC10BQ8IUB3 73 aa3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 OR13C6PQ8NH95 151 aa3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 ORMDL1Q9P0S3 153 aa3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 FBN1P35555 2871 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-210ENST00000532925 TRBV7-7A0A0K0K1E9 115 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 JMJD7-PLA2G4BH0Y9G9 81 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 TMEM256-PLSCR3K7ERE1 68 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 IGLV6-57P01721 117 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 UPK3BQ9BT76 320 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 RETNQ9HD89 108 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 C22orf24Q9Y442 160 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 NBEAL2Q6ZNJ1 2754 aa3.81□□□□□ -1.8
ATPAF1-210ENST00000532925 A0A087WYN8 130 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 TLX1NBP0CAT3 122 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 ESRGQ1W209 222 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 C10orf25Q5T742 122 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 UNQ6190/PRO20217Q6UXQ8 127 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 LINC00643Q86TS7 51 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 RMI2Q96E14 147 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 C6orf48Q9UBA6 75 aa3.8□□□□□ -1.8
ATPAF1-210ENST00000532925 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 NDUFC2-KCTD14E9PQ53 114 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 LECT2O14960 151 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 GAGE2BQ13066 116 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 GAGE2EQ4V326 116 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 S100A7L2Q5SY68 101 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 LINC00575Q6W349 94 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 Q8N814 137 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 C15orf56Q8N910 161 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 CAMK2N2Q96S95 79 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 GAGE2DQ9UEU5 116 aa3.79□□□□□ -1.8
ATPAF1-210ENST00000532925 VPREB1P12018 145 aa3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 C6orf99Q4VX62 202 aa3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 C9orf116Q5BN46 136 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 C6orf223Q8N319 242 aa3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 DIRC1Q969H9 104 aa3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 Q9HAA7 133 aa3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 ANK2Q01484 3957 aa3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 HUWE1Q7Z6Z7 4374 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-210ENST00000532925 TRAV23DV6A0A075B6W5 121 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 hADV29S1A0JD25 119 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 K7EIL1 84 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 M0R378 163 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 NCR3O14931 201 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 PDE6GP18545 87 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 ELOF1P60002 83 aaKnown RBP3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 Q6ZRU5 148 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 Q8NDZ9 215 aa3.77□□□□□ -1.81
ATPAF1-210ENST00000532925 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
ATPAF1-210ENST00000532925 IGKV2D-24A0A075B6R9 120 aa3.76□□□□□ -1.81
ATPAF1-210ENST00000532925 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
ATPAF1-210ENST00000532925 SYCNQ0VAF6 134 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms