RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
SOX6-213ENST00000530378 HNRNPA3P51991 378 aaKnown RBP6.85□□□□□ -1.31
SOX6-213ENST00000530378 C9orf163Q8N9P6 203 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 A0A096LNI7 61 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 TMEM238C9JI98 176 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 MIEN1Q9BRT3 115 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 LOC107984640A0A0U1RRK4 108 aa6.84□□□□□ -1.31
SOX6-213ENST00000530378 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
SOX6-213ENST00000530378 CIRBPQ14011 172 aaKnown RBP6.84□□□□□ -1.31
SOX6-213ENST00000530378 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
SOX6-213ENST00000530378 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
SOX6-213ENST00000530378 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
SOX6-213ENST00000530378 PANO1I0J062 215 aa6.83□□□□□ -1.32
SOX6-213ENST00000530378 SRSF9Q13242 221 aaKnown RBP eCLIP6.83□□□□□ -1.32
SOX6-213ENST00000530378 SOSTDC1Q6X4U4 206 aa6.83□□□□□ -1.32
SOX6-213ENST00000530378 HIST1H4GQ99525 98 aa6.83□□□□□ -1.32
SOX6-213ENST00000530378 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
SOX6-213ENST00000530378 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
SOX6-213ENST00000530378 TIMM17BO60830 172 aa6.82□□□□□ -1.32
SOX6-213ENST00000530378 GCSHP23434 173 aa6.82□□□□□ -1.32
SOX6-213ENST00000530378 HAMPP81172 84 aa6.82□□□□□ -1.32
SOX6-213ENST00000530378 COX17Q14061 63 aa6.82□□□□□ -1.32
SOX6-213ENST00000530378 C9orf129Q5T035 196 aaKnown RBP6.82□□□□□ -1.32
SOX6-213ENST00000530378 SDIM1Q6ZPB5 146 aa6.82□□□□□ -1.32
SOX6-213ENST00000530378 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
SOX6-213ENST00000530378 KRTAP10-1P60331 282 aa6.81□□□□□ -1.32
SOX6-213ENST00000530378 Q8NDZ9 215 aa6.81□□□□□ -1.32
SOX6-213ENST00000530378 LINC00308Q8TCZ7 52 aa6.81□□□□□ -1.32
SOX6-213ENST00000530378 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
SOX6-213ENST00000530378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
SOX6-213ENST00000530378 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
SOX6-213ENST00000530378 DDTP30046 118 aa6.8□□□□□ -1.32
SOX6-213ENST00000530378 MUSTN1Q8IVN3 82 aa6.8□□□□□ -1.32
SOX6-213ENST00000530378 SPANXDQ9BXN6 97 aa6.8□□□□□ -1.32
SOX6-213ENST00000530378 SPANXCQ9NY87 97 aa6.8□□□□□ -1.32
SOX6-213ENST00000530378 RYR1P21817 5038 aa6.8□□□□□ -1.32
SOX6-213ENST00000530378 C16orf90A8MZG2 172 aa6.8□□□□□ -1.32
SOX6-213ENST00000530378 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
SOX6-213ENST00000530378 SPANXB1Q9NS25 103 aaPredicted RBP6.8□□□□□ -1.32
SOX6-213ENST00000530378 PRR3P79522 188 aaKnown RBP6.79□□□□□ -1.32
SOX6-213ENST00000530378 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
SOX6-213ENST00000530378 NCR3O14931 201 aa6.78□□□□□ -1.32
SOX6-213ENST00000530378 SERTAD4-AS1Q5TG53 156 aa6.78□□□□□ -1.32
SOX6-213ENST00000530378 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
SOX6-213ENST00000530378 HINT1P49773 126 aaPredicted RBP6.78□□□□□ -1.32
SOX6-213ENST00000530378 HSD52Q0P140 79 aa6.78□□□□□ -1.32
SOX6-213ENST00000530378 APOBP04114 4563 aaKnown RBP6.78□□□□□ -1.32
SOX6-213ENST00000530378 FXYD2P54710 66 aa6.77□□□□□ -1.33
SOX6-213ENST00000530378 BATFQ16520 125 aa6.77□□□□□ -1.33
SOX6-213ENST00000530378 A0A1W2PNN7 141 aa6.76□□□□□ -1.33
SOX6-213ENST00000530378 A4D1N5 150 aa6.76□□□□□ -1.33
SOX6-213ENST00000530378 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
SOX6-213ENST00000530378 CEND1Q8N111 149 aa6.76□□□□□ -1.33
SOX6-213ENST00000530378 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
SOX6-213ENST00000530378 GAGE10A6NGK3 116 aa6.76□□□□□ -1.33
SOX6-213ENST00000530378 IFITM1P13164 125 aa6.75□□□□□ -1.33
SOX6-213ENST00000530378 Q6ZVH6 145 aa6.75□□□□□ -1.33
SOX6-213ENST00000530378 PKIGQ9Y2B9 76 aa6.75□□□□□ -1.33
SOX6-213ENST00000530378 A0A087WYN8 130 aa6.74□□□□□ -1.33
SOX6-213ENST00000530378 K7ERJ3 54 aa6.74□□□□□ -1.33
SOX6-213ENST00000530378 VPREB1P12018 145 aa6.74□□□□□ -1.33
SOX6-213ENST00000530378 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
SOX6-213ENST00000530378 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
SOX6-213ENST00000530378 M0QXV9 152 aa6.73□□□□□ -1.33
SOX6-213ENST00000530378 TAL2Q16559 108 aa6.73□□□□□ -1.33
SOX6-213ENST00000530378 BVES-AS1Q5T3Y7 98 aa6.73□□□□□ -1.33
SOX6-213ENST00000530378 IGKV2-28A0A075B6P5 120 aa6.73□□□□□ -1.33
SOX6-213ENST00000530378 IGKV2D-28P01615 120 aa6.73□□□□□ -1.33
SOX6-213ENST00000530378 PHF5AQ7RTV0 110 aaKnown RBP6.73□□□□□ -1.33
SOX6-213ENST00000530378 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
SOX6-213ENST00000530378 NHP2Q9NX24 153 aaKnown RBP6.73□□□□□ -1.33
SOX6-213ENST00000530378 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
SOX6-213ENST00000530378 SCXQ7RTU7 201 aa6.72□□□□□ -1.33
SOX6-213ENST00000530378 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
SOX6-213ENST00000530378 LOC107984156A0A0G2JMH3 177 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 RPL37AP8A6NKH3 93 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 H7C2G1 150 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 ARL17AQ8IVW1 177 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 OR13C6PQ8NH95 151 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 CIRBP-AS1Q8TBR5 109 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 C7orf33Q8WU49 177 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 C22orf24Q9Y442 160 aa6.71□□□□□ -1.33
SOX6-213ENST00000530378 Q6ZSA8 131 aa6.71□□□□□ -1.34
SOX6-213ENST00000530378 A6NDN8 102 aa6.7□□□□□ -1.34
SOX6-213ENST00000530378 M0R143 59 aa6.7□□□□□ -1.34
SOX6-213ENST00000530378 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
SOX6-213ENST00000530378 CFC1P0CG37 223 aa6.7□□□□□ -1.34
SOX6-213ENST00000530378 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 NDUFC2O95298 119 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
SOX6-213ENST00000530378 MRPL55Q7Z7F7 128 aaKnown RBP6.69□□□□□ -1.34
SOX6-213ENST00000530378 RAB37Q96AX2 223 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 S100A7L2Q5SY68 101 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 PLAC8Q9NZF1 115 aa6.69□□□□□ -1.34
SOX6-213ENST00000530378 M0R378 163 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms