RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 C12orf57Q99622 126 aa5.06□□□□□ -1.6
SSBP3-211ENST00000528787 IGLV5-37A0A075B6J1 123 aa5.05□□□□□ -1.6
SSBP3-211ENST00000528787 A0A087WYN8 130 aa5.05□□□□□ -1.6
SSBP3-211ENST00000528787 A0A0U1RRA0 63 aa5.05□□□□□ -1.6
SSBP3-211ENST00000528787 FAM229AH3BQW9 127 aa5.05□□□□□ -1.6
SSBP3-211ENST00000528787 XAGE1AQ9HD64 81 aa5.05□□□□□ -1.6
SSBP3-211ENST00000528787 EPM2AB3EWF7 344 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 M0QXV9 152 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 M0R378 163 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 PLA2G1BP04054 148 aaKnown RBP5.04□□□□□ -1.6
SSBP3-211ENST00000528787 HINT1P49773 126 aaPredicted RBP5.04□□□□□ -1.6
SSBP3-211ENST00000528787 UBE2BP63146 152 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 LINC01620Q4KN68 170 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 S100A7L2Q5SY68 101 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 SCXQ7RTU7 201 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 FAM19A5Q7Z5A7 132 aaPredicted RBP5.04□□□□□ -1.6
SSBP3-211ENST00000528787 MRPL55Q7Z7F7 128 aaKnown RBP5.04□□□□□ -1.6
SSBP3-211ENST00000528787 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 C14orf144Q96I85 54 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
SSBP3-211ENST00000528787 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
SSBP3-211ENST00000528787 TRAV13-2A0A0B4J235 113 aa5.03□□□□□ -1.6
SSBP3-211ENST00000528787 C9orf129Q5T035 196 aaKnown RBP5.03□□□□□ -1.6
SSBP3-211ENST00000528787 TMEM126AQ9H061 195 aa5.03□□□□□ -1.6
SSBP3-211ENST00000528787 RYR3Q15413 4870 aa5.02□□□□□ -1.61
SSBP3-211ENST00000528787 CHTF8P0CG12 524 aa5.02□□□□□ -1.61
SSBP3-211ENST00000528787 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
SSBP3-211ENST00000528787 HNRNPA3P51991 378 aaKnown RBP5.02□□□□□ -1.61
SSBP3-211ENST00000528787 HSD52Q0P140 79 aa5.02□□□□□ -1.61
SSBP3-211ENST00000528787 LITAFQ99732 161 aa5.02□□□□□ -1.61
SSBP3-211ENST00000528787 TTTY13Q9BZ97 58 aa5.02□□□□□ -1.61
SSBP3-211ENST00000528787 C22orf24Q9Y442 160 aa5.02□□□□□ -1.61
SSBP3-211ENST00000528787 M0R143 59 aa5.01□□□□□ -1.61
SSBP3-211ENST00000528787 VPREB1P12018 145 aa5.01□□□□□ -1.61
SSBP3-211ENST00000528787 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
SSBP3-211ENST00000528787 DAND5Q8N907 189 aa5.01□□□□□ -1.61
SSBP3-211ENST00000528787 DNAH10Q8IVF4 4471 aa5.01□□□□□ -1.61
SSBP3-211ENST00000528787 DNAH17Q9UFH2 4485 aa5.01□□□□□ -1.61
SSBP3-211ENST00000528787 DNAH2Q9P225 4427 aa5□□□□□ -1.61
SSBP3-211ENST00000528787 PRYO14603 147 aa5□□□□□ -1.61
SSBP3-211ENST00000528787 SNCGO76070 127 aa5□□□□□ -1.61
SSBP3-211ENST00000528787 MUSTN1Q8IVN3 82 aa5□□□□□ -1.61
SSBP3-211ENST00000528787 FAM30AQ9NZY2 134 aa5□□□□□ -1.61
SSBP3-211ENST00000528787 A0A1W2PNN7 141 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 DDTP30046 118 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 VAMP3Q15836 100 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 CEND1Q8N111 149 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 LINC00528Q8N1L1 170 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 OR13C6PQ8NH95 151 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 RAB37Q96AX2 223 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
SSBP3-211ENST00000528787 FAT2Q9NYQ8 4349 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 IGLV1-50A0A075B6I6 118 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 FAM168BA1KXE4 195 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 A4D1N5 150 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 A6NDN8 102 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 NCR3O14931 201 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 XGP55808 180 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 RPL37AP61513 92 aaKnown RBP4.98□□□□□ -1.61
SSBP3-211ENST00000528787 NPC2P61916 151 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 SERTAD4-AS1Q5TG53 156 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 LINC00167Q96N53 147 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 KCNQ1DNQ9H478 68 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 PKD1P98161 4303 aa4.98□□□□□ -1.61
SSBP3-211ENST00000528787 A0A0B4J2C4 111 aa4.97□□□□□ -1.61
SSBP3-211ENST00000528787 PANO1I0J062 215 aa4.97□□□□□ -1.61
SSBP3-211ENST00000528787 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
SSBP3-211ENST00000528787 REG3GQ6UW15 175 aa4.97□□□□□ -1.61
SSBP3-211ENST00000528787 PHF5AQ7RTV0 110 aaKnown RBP4.97□□□□□ -1.61
SSBP3-211ENST00000528787 PKHD1P08F94 4074 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 TRAV23DV6A0A075B6W5 121 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 TRBV7-6A0A0J9YX20 115 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 ETDCA0A1B0GVM5 59 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 H0Y9J4 135 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 BCE1O60756 84 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 GHRHP01286 108 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 IGLV6-57P01721 117 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 C2orf91Q6ZV80 131 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 Q8N1X5 172 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 LINC00337Q8N6G1 96 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 DIRC1Q969H9 104 aa4.96□□□□□ -1.62
SSBP3-211ENST00000528787 NHP2Q9NX24 153 aaKnown RBP4.96□□□□□ -1.62
SSBP3-211ENST00000528787 IGKV2-28A0A075B6P5 120 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 GAGE10A6NGK3 116 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 RPL37AP8A6NKH3 93 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 SLC25A20O43772 301 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 IGKV2D-28P01615 120 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 COX6CP09669 75 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 UBE2AP49459 152 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 PRR3P79522 188 aaKnown RBP4.95□□□□□ -1.62
SSBP3-211ENST00000528787 C1orf137Q5JT78 98 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 BVES-AS1Q5T3Y7 98 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 SOSTDC1Q6X4U4 206 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 PRO1933Q9H354 126 aa4.95□□□□□ -1.62
SSBP3-211ENST00000528787 TRBV10-3A0A0K0K1G6 114 aa4.94□□□□□ -1.62
SSBP3-211ENST00000528787 A0A1B0GWB2 263 aa4.94□□□□□ -1.62
SSBP3-211ENST00000528787 ZNF73O43830 326 aaPredicted RBP4.94□□□□□ -1.62
SSBP3-211ENST00000528787 Q1RN00 199 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms