RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 M0R378 163 aa4.4□□□□□ -1.71
USP48-212ENST00000527823 CKS2P33552 79 aa4.4□□□□□ -1.71
USP48-212ENST00000527823 TAGLN2P37802 199 aaKnown RBP4.4□□□□□ -1.71
USP48-212ENST00000527823 CXCL5P42830 114 aa4.4□□□□□ -1.71
USP48-212ENST00000527823 Q8N377 158 aa4.4□□□□□ -1.71
USP48-212ENST00000527823 C2orf88Q9BSF0 95 aa4.4□□□□□ -1.71
USP48-212ENST00000527823 CEBPGP53567 150 aa4.39□□□□□ -1.71
USP48-212ENST00000527823 FAM19A3Q7Z5A8 133 aa4.39□□□□□ -1.71
USP48-212ENST00000527823 AMELXQ99217 191 aa4.39□□□□□ -1.71
USP48-212ENST00000527823 HIGD2AQ9BW72 106 aa4.39□□□□□ -1.71
USP48-212ENST00000527823 OSTCQ9NRP0 149 aa4.39□□□□□ -1.71
USP48-212ENST00000527823 CDKN2A-AS1Q9UH64 79 aa4.39□□□□□ -1.71
USP48-212ENST00000527823 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
USP48-212ENST00000527823 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 A0A1B0GVG6 124 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 M0R2T5 61 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 SPINK1P00995 79 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 PCOTHQ58A44 107 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 CBLN2Q8IUK8 224 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 NDUFA12Q9UI09 145 aa4.38□□□□□ -1.71
USP48-212ENST00000527823 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
USP48-212ENST00000527823 FAM19A2Q8N3H0 131 aa4.37□□□□□ -1.71
USP48-212ENST00000527823 Q8NDZ9 215 aa4.37□□□□□ -1.71
USP48-212ENST00000527823 SMIM7Q9BQ49 75 aa4.37□□□□□ -1.71
USP48-212ENST00000527823 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
USP48-212ENST00000527823 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
USP48-212ENST00000527823 HERVK_113P63121 156 aa4.36□□□□□ -1.71
USP48-212ENST00000527823 FAM74A3Q4VXF1 159 aa4.36□□□□□ -1.71
USP48-212ENST00000527823 C2orf66Q6UXQ4 117 aa4.36□□□□□ -1.71
USP48-212ENST00000527823 FAM218AQ96MZ4 157 aa4.36□□□□□ -1.71
USP48-212ENST00000527823 GNB1LQ9BYB4 327 aa4.36□□□□□ -1.71
USP48-212ENST00000527823 BATF3Q9NR55 127 aa4.36□□□□□ -1.71
USP48-212ENST00000527823 A0A1B0GXF2 115 aa4.35□□□□□ -1.71
USP48-212ENST00000527823 RAB5AP20339 215 aa4.35□□□□□ -1.71
USP48-212ENST00000527823 RAB5BP61020 215 aa4.35□□□□□ -1.71
USP48-212ENST00000527823 MRPL54Q6P161 138 aaKnown RBP4.35□□□□□ -1.71
USP48-212ENST00000527823 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
USP48-212ENST00000527823 CYSLTR1Q9Y271 337 aa4.35□□□□□ -1.71
USP48-212ENST00000527823 A0A1B0GW15 77 aa4.34□□□□□ -1.71
USP48-212ENST00000527823 SMIM27A0A1W2PRY6 76 aa4.34□□□□□ -1.71
USP48-212ENST00000527823 IGIPA6NJ69 53 aa4.34□□□□□ -1.71
USP48-212ENST00000527823 MOBPQ13875 183 aa4.34□□□□□ -1.71
USP48-212ENST00000527823 ORMDL3Q8N138 153 aa4.34□□□□□ -1.71
USP48-212ENST00000527823 VCX2Q9H322 139 aa4.34□□□□□ -1.71
USP48-212ENST00000527823 ZNF706Q9Y5V0 76 aaPredicted RBP4.34□□□□□ -1.71
USP48-212ENST00000527823 KRTAP16-1A8MUX0 517 aa4.33□□□□□ -1.72
USP48-212ENST00000527823 PPBPP02775 128 aa4.33□□□□□ -1.72
USP48-212ENST00000527823 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
USP48-212ENST00000527823 GEMIN7Q9H840 131 aaKnown RBP4.33□□□□□ -1.72
USP48-212ENST00000527823 LOC389332A0A1B0GUA5 103 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 C5orf52A6NGY3 159 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 SLC25A20O43772 301 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
USP48-212ENST00000527823 SEC11AP67812 179 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 LINC00483Q53H64 154 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 PDZD11Q5EBL8 140 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 SND1-IT1Q9HBX3 110 aa4.32□□□□□ -1.72
USP48-212ENST00000527823 F8W036 122 aa4.31□□□□□ -1.72
USP48-212ENST00000527823 KRTAP4-16G5E9R7 235 aaPredicted RBP4.31□□□□□ -1.72
USP48-212ENST00000527823 SPINK8P0C7L1 97 aa4.31□□□□□ -1.72
USP48-212ENST00000527823 PFN2P35080 140 aa4.31□□□□□ -1.72
USP48-212ENST00000527823 RGS21Q2M5E4 152 aa4.31□□□□□ -1.72
USP48-212ENST00000527823 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
USP48-212ENST00000527823 SLC51BQ86UW2 128 aa4.31□□□□□ -1.72
USP48-212ENST00000527823 SRP19P09132 144 aaKnown RBP4.3□□□□□ -1.72
USP48-212ENST00000527823 ADIRFQ15847 76 aa4.3□□□□□ -1.72
USP48-212ENST00000527823 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
USP48-212ENST00000527823 TMEM136Q6ZRR5 245 aa4.3□□□□□ -1.72
USP48-212ENST00000527823 TIMM17AQ99595 171 aa4.3□□□□□ -1.72
USP48-212ENST00000527823 MAP1LC3AQ9H492 121 aa4.3□□□□□ -1.72
USP48-212ENST00000527823 C9orf92A6NGG3 77 aa4.29□□□□□ -1.72
USP48-212ENST00000527823 ATP5LO75964 103 aa4.29□□□□□ -1.72
USP48-212ENST00000527823 S100A8P05109 93 aa4.29□□□□□ -1.72
USP48-212ENST00000527823 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
USP48-212ENST00000527823 RAB14P61106 215 aa4.29□□□□□ -1.72
USP48-212ENST00000527823 ORMDL2Q53FV1 153 aa4.29□□□□□ -1.72
USP48-212ENST00000527823 Q8N8P6 123 aa4.29□□□□□ -1.72
USP48-212ENST00000527823 SMCR5Q8TEV8 140 aa4.29□□□□□ -1.72
USP48-212ENST00000527823 TINCRA0A1B0GVN0 87 aa4.28□□□□□ -1.72
USP48-212ENST00000527823 SPRR1AP35321 89 aa4.28□□□□□ -1.72
USP48-212ENST00000527823 ALKAL2Q6UX46 152 aa4.28□□□□□ -1.72
USP48-212ENST00000527823 AKAP14Q86UN6 197 aa4.28□□□□□ -1.72
USP48-212ENST00000527823 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
USP48-212ENST00000527823 LAMTOR2Q9Y2Q5 125 aa4.28□□□□□ -1.72
USP48-212ENST00000527823 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
USP48-212ENST00000527823 ADCYAP1P18509 176 aa4.26□□□□□ -1.73
USP48-212ENST00000527823 ATP5L2Q7Z4Y8 100 aa4.26□□□□□ -1.73
USP48-212ENST00000527823 TOMM6Q96B49 74 aa4.26□□□□□ -1.73
USP48-212ENST00000527823 C9JQL5 133 aa4.25□□□□□ -1.73
USP48-212ENST00000527823 K7EMI3 77 aa4.25□□□□□ -1.73
USP48-212ENST00000527823 SSBP3-AS1Q7Z2R9 100 aa4.25□□□□□ -1.73
USP48-212ENST00000527823 NAT8Q9UHE5 227 aa4.25□□□□□ -1.73
USP48-212ENST00000527823 ZNF625Q96I27 306 aaPredicted RBP4.24□□□□□ -1.73
USP48-212ENST00000527823 ETDCA0A1B0GVM5 59 aa4.23□□□□□ -1.73
USP48-212ENST00000527823 NCR3O14931 201 aa4.23□□□□□ -1.73
USP48-212ENST00000527823 COX17Q14061 63 aa4.23□□□□□ -1.73
USP48-212ENST00000527823 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
USP48-212ENST00000527823 ERASQ7Z444 233 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms