RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 TIMM17BO60830 172 aa13.39□□□□□ -0.27
PKP3-205ENST00000527442 COX17Q14061 63 aa13.39□□□□□ -0.27
PKP3-205ENST00000527442 SCGB1D4Q6XE38 83 aa13.39□□□□□ -0.27
PKP3-205ENST00000527442 MEIG1Q5JSS6 88 aa13.38□□□□□ -0.27
PKP3-205ENST00000527442 PRO1933Q9H354 126 aa13.38□□□□□ -0.27
PKP3-205ENST00000527442 TLX1NBP0CAT3 122 aa13.37□□□□□ -0.27
PKP3-205ENST00000527442 C9orf116Q5BN46 136 aaPredicted RBP13.37□□□□□ -0.27
PKP3-205ENST00000527442 C9orf163Q8N9P6 203 aa13.37□□□□□ -0.27
PKP3-205ENST00000527442 LITAFQ99732 161 aa13.37□□□□□ -0.27
PKP3-205ENST00000527442 TSTD3H0UI37 97 aa13.36□□□□□ -0.27
PKP3-205ENST00000527442 RPL37AP61513 92 aaKnown RBP13.36□□□□□ -0.27
PKP3-205ENST00000527442 C2orf91Q6ZV80 131 aa13.36□□□□□ -0.27
PKP3-205ENST00000527442 HIGD1BQ9P298 99 aa13.36□□□□□ -0.27
PKP3-205ENST00000527442 TMEM238C9JI98 176 aa13.35□□□□□ -0.27
PKP3-205ENST00000527442 SMIM13P0DJ93 91 aa13.35□□□□□ -0.27
PKP3-205ENST00000527442 CIRBPQ14011 172 aaKnown RBP13.35□□□□□ -0.27
PKP3-205ENST00000527442 MIEN1Q9BRT3 115 aa13.35□□□□□ -0.27
PKP3-205ENST00000527442 PKIGQ9Y2B9 76 aa13.34□□□□□ -0.27
PKP3-205ENST00000527442 NDUFC2-KCTD14E9PQ53 114 aa13.33□□□□□ -0.28
PKP3-205ENST00000527442 PFN2P35080 140 aa13.33□□□□□ -0.28
PKP3-205ENST00000527442 SPANXB1Q9NS25 103 aaPredicted RBP13.33□□□□□ -0.28
PKP3-205ENST00000527442 LINC00158P58513 81 aa13.32□□□□□ -0.28
PKP3-205ENST00000527442 SPANXDQ9BXN6 97 aa13.32□□□□□ -0.28
PKP3-205ENST00000527442 SPANXCQ9NY87 97 aa13.32□□□□□ -0.28
PKP3-205ENST00000527442 LOC107984640A0A0U1RRK4 108 aa13.31□□□□□ -0.28
PKP3-205ENST00000527442 MT1HL1P0DM35 61 aa13.31□□□□□ -0.28
PKP3-205ENST00000527442 ADAMTSL4-AS1Q5T5F5 129 aa13.3□□□□□ -0.28
PKP3-205ENST00000527442 MIR7-3HGQ8N6C7 128 aa13.3□□□□□ -0.28
PKP3-205ENST00000527442 A0A0U1RRA0 63 aa13.29□□□□□ -0.28
PKP3-205ENST00000527442 Q6ZVH6 145 aa13.29□□□□□ -0.28
PKP3-205ENST00000527442 Q6ZRP5 223 aa13.28□□□□□ -0.28
PKP3-205ENST00000527442 RPL18AQ02543 176 aaKnown RBP13.27□□□□□ -0.29
PKP3-205ENST00000527442 DAND5Q8N907 189 aa13.27□□□□□ -0.29
PKP3-205ENST00000527442 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
PKP3-205ENST00000527442 PTTG1IPP53801 180 aa13.26□□□□□ -0.29
PKP3-205ENST00000527442 SDIM1Q6ZPB5 146 aa13.26□□□□□ -0.29
PKP3-205ENST00000527442 SND1-IT1Q9HBX3 110 aa13.26□□□□□ -0.29
PKP3-205ENST00000527442 LOC107984156A0A0G2JMH3 177 aa13.24□□□□□ -0.29
PKP3-205ENST00000527442 IFITM1P13164 125 aa13.24□□□□□ -0.29
PKP3-205ENST00000527442 TAL2Q16559 108 aa13.24□□□□□ -0.29
PKP3-205ENST00000527442 ARL17AQ8IVW1 177 aa13.24□□□□□ -0.29
PKP3-205ENST00000527442 A0A096LNI7 61 aa13.23□□□□□ -0.29
PKP3-205ENST00000527442 SRSF9Q13242 221 aaKnown RBP eCLIP13.23□□□□□ -0.29
PKP3-205ENST00000527442 LINC00308Q8TCZ7 52 aa13.23□□□□□ -0.29
PKP3-205ENST00000527442 HSD52Q0P140 79 aa13.22□□□□□ -0.29
PKP3-205ENST00000527442 GAGE2EQ4V326 116 aa13.22□□□□□ -0.29
PKP3-205ENST00000527442 SOSTDC1Q6X4U4 206 aa13.22□□□□□ -0.29
PKP3-205ENST00000527442 COPS9Q8WXC6 57 aa13.22□□□□□ -0.29
PKP3-205ENST00000527442 HIST1H4GQ99525 98 aa13.22□□□□□ -0.29
PKP3-205ENST00000527442 GAGE2DQ9UEU5 116 aa13.22□□□□□ -0.29
PKP3-205ENST00000527442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.22□□□□□ -0.29
PKP3-205ENST00000527442 PANO1I0J062 215 aa13.21□□□□□ -0.29
PKP3-205ENST00000527442 DDTP30046 118 aa13.21□□□□□ -0.29
PKP3-205ENST00000527442 GAGE2BQ13066 116 aa13.21□□□□□ -0.29
PKP3-205ENST00000527442 XAGE1AQ9HD64 81 aa13.21□□□□□ -0.29
PKP3-205ENST00000527442 LRP2P98164 4655 aa13.2□□□□□ -0.3
PKP3-205ENST00000527442 C9orf129Q5T035 196 aaKnown RBP13.2□□□□□ -0.3
PKP3-205ENST00000527442 EIF4EBP3O60516 100 aaPredicted RBP13.19□□□□□ -0.3
PKP3-205ENST00000527442 NPC2P61916 151 aa13.19□□□□□ -0.3
PKP3-205ENST00000527442 LINC00474Q9P2X8 69 aa13.19□□□□□ -0.3
PKP3-205ENST00000527442 MUSTN1Q8IVN3 82 aa13.18□□□□□ -0.3
PKP3-205ENST00000527442 IGKV2-24A0A0C4DH68 120 aa13.17□□□□□ -0.3
PKP3-205ENST00000527442 CHTF8P0CG12 524 aa13.16□□□□□ -0.3
PKP3-205ENST00000527442 CEND1Q8N111 149 aa13.16□□□□□ -0.3
PKP3-205ENST00000527442 SPACA4Q8TDM5 124 aa13.16□□□□□ -0.3
PKP3-205ENST00000527442 CTAG1AP78358 180 aa13.15□□□□□ -0.3
PKP3-205ENST00000527442 TNXBP22105 4242 aa13.15□□□□□ -0.31
PKP3-205ENST00000527442 RNF213Q63HN8 5207 aa13.15□□□□□ -0.31
PKP3-205ENST00000527442 NDUFC2O95298 119 aa13.14□□□□□ -0.31
PKP3-205ENST00000527442 RPL24P83731 157 aaKnown RBP13.14□□□□□ -0.31
PKP3-205ENST00000527442 VPREB1P12018 145 aa13.12□□□□□ -0.31
PKP3-205ENST00000527442 Q8NDZ9 215 aa13.12□□□□□ -0.31
PKP3-205ENST00000527442 IGLV5-37A0A075B6J1 123 aa13.11□□□□□ -0.31
PKP3-205ENST00000527442 A4D1N5 150 aa13.1□□□□□ -0.31
PKP3-205ENST00000527442 M0R143 59 aa13.1□□□□□ -0.31
PKP3-205ENST00000527442 FXYD2P54710 66 aa13.1□□□□□ -0.31
PKP3-205ENST00000527442 TMEM238LA0A1B0GVL6 79 aa13.09□□□□□ -0.31
PKP3-205ENST00000527442 FAM168BA1KXE4 195 aa13.09□□□□□ -0.31
PKP3-205ENST00000527442 A6NJY4 79 aa13.09□□□□□ -0.31
PKP3-205ENST00000527442 BVES-AS1Q5T3Y7 98 aa13.09□□□□□ -0.31
PKP3-205ENST00000527442 KRTAP7-1Q8IUC3 87 aa13.09□□□□□ -0.31
PKP3-205ENST00000527442 TRBV10-2A0A0K0K1G8 114 aa13.07□□□□□ -0.32
PKP3-205ENST00000527442 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
PKP3-205ENST00000527442 PCP4L1A6NKN8 68 aa13.07□□□□□ -0.32
PKP3-205ENST00000527442 IGKV2-28A0A075B6P5 120 aa13.06□□□□□ -0.32
PKP3-205ENST00000527442 IGKV2D-28P01615 120 aa13.06□□□□□ -0.32
PKP3-205ENST00000527442 FAM19A5Q7Z5A7 132 aaPredicted RBP13.06□□□□□ -0.32
PKP3-205ENST00000527442 A0A087WYN8 130 aa13.05□□□□□ -0.32
PKP3-205ENST00000527442 HINT1P49773 126 aaPredicted RBP13.05□□□□□ -0.32
PKP3-205ENST00000527442 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
PKP3-205ENST00000527442 NKAPP1Q8N9T2 125 aa13.04□□□□□ -0.32
PKP3-205ENST00000527442 A0A0B4J2C4 111 aa13.03□□□□□ -0.32
PKP3-205ENST00000527442 NCR3O14931 201 aa13.03□□□□□ -0.32
PKP3-205ENST00000527442 A0A1B0GWB2 263 aa13.02□□□□□ -0.33
PKP3-205ENST00000527442 M0QXV9 152 aa13.02□□□□□ -0.33
PKP3-205ENST00000527442 M0R378 163 aa13.02□□□□□ -0.33
PKP3-205ENST00000527442 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
PKP3-205ENST00000527442 C22orf24Q9Y442 160 aa13.02□□□□□ -0.33
PKP3-205ENST00000527442 CFC1BP0CG36 223 aa13.01□□□□□ -0.33
PKP3-205ENST00000527442 CFC1P0CG37 223 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms