RNA–Protein interactions for RNA: ENST00000527104.5

NUP98-214, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-214ENST00000527104 VCYO14598 125 aa4.63□□□□□ -1.67
NUP98-214ENST00000527104 HERVK_113P61574 105 aa4.63□□□□□ -1.67
NUP98-214ENST00000527104 C20orf203Q8NBC4 194 aa4.63□□□□□ -1.67
NUP98-214ENST00000527104 SCGB3A1Q96QR1 104 aa4.63□□□□□ -1.67
NUP98-214ENST00000527104 TMEM243Q9BU79 118 aa4.63□□□□□ -1.67
NUP98-214ENST00000527104 PSORS1C2Q9UIG4 136 aa4.63□□□□□ -1.67
NUP98-214ENST00000527104 CYSLTR1Q9Y271 337 aa4.63□□□□□ -1.67
NUP98-214ENST00000527104 IGLV4-60A0A075B6I1 120 aa4.62□□□□□ -1.67
NUP98-214ENST00000527104 IGIPA6NJ69 53 aa4.62□□□□□ -1.67
NUP98-214ENST00000527104 MGPP08493 103 aa4.62□□□□□ -1.67
NUP98-214ENST00000527104 SRSF9Q13242 221 aaKnown RBP eCLIP4.62□□□□□ -1.67
NUP98-214ENST00000527104 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
NUP98-214ENST00000527104 KIR2DL4Q99706 377 aa4.62□□□□□ -1.67
NUP98-214ENST00000527104 H3BMG7 143 aa4.61□□□□□ -1.67
NUP98-214ENST00000527104 PMVKQ15126 192 aa4.61□□□□□ -1.67
NUP98-214ENST00000527104 MTURNQ8N3F0 131 aa4.61□□□□□ -1.67
NUP98-214ENST00000527104 HIST1H4GQ99525 98 aa4.61□□□□□ -1.67
NUP98-214ENST00000527104 PPDPFQ9H3Y8 114 aa4.61□□□□□ -1.67
NUP98-214ENST00000527104 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
NUP98-214ENST00000527104 PYGO1Q9Y3Y4 419 aa4.61□□□□□ -1.67
NUP98-214ENST00000527104 A0A1B0GUV1 79 aa4.6□□□□□ -1.67
NUP98-214ENST00000527104 RNF151Q2KHN1 245 aa4.6□□□□□ -1.67
NUP98-214ENST00000527104 PRR26Q8N8Z3 221 aa4.6□□□□□ -1.67
NUP98-214ENST00000527104 NHP2Q9NX24 153 aaKnown RBP4.6□□□□□ -1.67
NUP98-214ENST00000527104 IGLV4-69A0A075B6H9 119 aa4.59□□□□□ -1.67
NUP98-214ENST00000527104 GVQW2A0A096LPI5 108 aaPredicted RBP4.59□□□□□ -1.67
NUP98-214ENST00000527104 SDHAF1A6NFY7 115 aa4.59□□□□□ -1.67
NUP98-214ENST00000527104 VPREB1P12018 145 aa4.59□□□□□ -1.67
NUP98-214ENST00000527104 CHCHD10Q8WYQ3 142 aaPredicted RBP4.59□□□□□ -1.67
NUP98-214ENST00000527104 CARD19Q96LW7 228 aa4.59□□□□□ -1.67
NUP98-214ENST00000527104 SIGMAR1Q99720 223 aa4.59□□□□□ -1.67
NUP98-214ENST00000527104 A0A0B4J2C4 111 aa4.58□□□□□ -1.68
NUP98-214ENST00000527104 TMEM238C9JI98 176 aa4.58□□□□□ -1.68
NUP98-214ENST00000527104 GAGE2BQ13066 116 aa4.58□□□□□ -1.68
NUP98-214ENST00000527104 C1orf137Q5JT78 98 aa4.58□□□□□ -1.68
NUP98-214ENST00000527104 DIRC1Q969H9 104 aa4.58□□□□□ -1.68
NUP98-214ENST00000527104 PLEKHB2Q96CS7 222 aa4.58□□□□□ -1.68
NUP98-214ENST00000527104 ZNF815PA8K554 130 aa4.57□□□□□ -1.68
NUP98-214ENST00000527104 M0QY20 66 aa4.57□□□□□ -1.68
NUP98-214ENST00000527104 TSHBP01222 138 aa4.57□□□□□ -1.68
NUP98-214ENST00000527104 SUMO4Q6EEV6 95 aa4.57□□□□□ -1.68
NUP98-214ENST00000527104 RAB37Q96AX2 223 aa4.57□□□□□ -1.68
NUP98-214ENST00000527104 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
NUP98-214ENST00000527104 AMELXQ99217 191 aa4.57□□□□□ -1.68
NUP98-214ENST00000527104 A0A0J9YXY3 114 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 LOC107984640A0A0U1RRK4 108 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 LEPROTO15243 131 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 TIMM17BO60830 172 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 XCL1P47992 114 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 SCGB1D4Q6XE38 83 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 TEN1Q86WV5 123 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 RPL39LQ96EH5 51 aaKnown RBP4.56□□□□□ -1.68
NUP98-214ENST00000527104 SPANXA1Q9NS26 97 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 PRO1854Q9UHT4 67 aa4.56□□□□□ -1.68
NUP98-214ENST00000527104 IGLV1-50A0A075B6I6 118 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 IGHV1-58A0A0C4DH39 117 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 TMEM223A0PJW6 202 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 I3L3M4 83 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 J3QQQ9 107 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 K7ERJ3 54 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 MRPS36P82909 103 aaKnown RBP4.55□□□□□ -1.68
NUP98-214ENST00000527104 RPL24P83731 157 aaKnown RBP4.55□□□□□ -1.68
NUP98-214ENST00000527104 FOXI1Q12951 378 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 PPDPFLQ8WWR9 84 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 SPANXDQ9BXN6 97 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
NUP98-214ENST00000527104 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.54□□□□□ -1.68
NUP98-214ENST00000527104 TRBV30A0A0K0K1B3 111 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 A0A1B0GV72 72 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 IGKV2-29A2NJV5 120 aaPredicted RBP4.54□□□□□ -1.68
NUP98-214ENST00000527104 B5MCH6 92 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 H0Y9J4 135 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 TSPAN13O95857 204 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 RPL18AQ02543 176 aaKnown RBP4.54□□□□□ -1.68
NUP98-214ENST00000527104 SMAGPQ0VAQ4 97 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 TMEM101Q96IK0 257 aa4.54□□□□□ -1.68
NUP98-214ENST00000527104 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 A0A087WZ39 114 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 A0A1W2PNN7 141 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 APOMO95445 188 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 IGLV7-43P04211 117 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 CFC1P0CG37 223 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 IFITM1P13164 125 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 LGALS3P17931 250 aaKnown RBP4.53□□□□□ -1.68
NUP98-214ENST00000527104 RPL13AP40429 203 aaKnown RBP4.53□□□□□ -1.68
NUP98-214ENST00000527104 ETDBQ3ZM63 59 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 C9orf116Q5BN46 136 aaPredicted RBP4.53□□□□□ -1.68
NUP98-214ENST00000527104 PHF5AQ7RTV0 110 aaKnown RBP4.53□□□□□ -1.68
NUP98-214ENST00000527104 COPS9Q8WXC6 57 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
NUP98-214ENST00000527104 FAM240AA0A1B0GVK7 77 aa4.52□□□□□ -1.69
NUP98-214ENST00000527104 TINCRA0A1B0GVN0 87 aa4.52□□□□□ -1.69
NUP98-214ENST00000527104 CAMK2N2Q96S95 79 aa4.52□□□□□ -1.69
NUP98-214ENST00000527104 NAA38Q9BRA0 125 aaKnown RBP4.52□□□□□ -1.69
NUP98-214ENST00000527104 CSDC2Q9Y534 153 aaKnown RBP4.52□□□□□ -1.69
NUP98-214ENST00000527104 IGLV4-3A0A075B6K6 122 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms