RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 PRSS2P07478 247 aa5.53□□□□□ -1.52
CCDC90B-208ENST00000527025 TLX1NBP0CAT3 122 aa5.53□□□□□ -1.52
CCDC90B-208ENST00000527025 CXCL5P42830 114 aa5.53□□□□□ -1.52
CCDC90B-208ENST00000527025 TSPEAR-AS2P59090 65 aa5.53□□□□□ -1.52
CCDC90B-208ENST00000527025 GAGE2BQ13066 116 aa5.53□□□□□ -1.52
CCDC90B-208ENST00000527025 C6orf226Q5I0X4 101 aa5.53□□□□□ -1.52
CCDC90B-208ENST00000527025 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
CCDC90B-208ENST00000527025 LOC107984640A0A0U1RRK4 108 aa5.52□□□□□ -1.53
CCDC90B-208ENST00000527025 FAM168BA1KXE4 195 aa5.52□□□□□ -1.53
CCDC90B-208ENST00000527025 S100A2P29034 98 aa5.52□□□□□ -1.53
CCDC90B-208ENST00000527025 CKS1BP61024 79 aa5.52□□□□□ -1.53
CCDC90B-208ENST00000527025 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
CCDC90B-208ENST00000527025 Q6ZRP5 223 aa5.52□□□□□ -1.53
CCDC90B-208ENST00000527025 KRTAP11-1Q8IUC1 163 aa5.52□□□□□ -1.53
CCDC90B-208ENST00000527025 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
CCDC90B-208ENST00000527025 E9PLD3 99 aa5.5□□□□□ -1.53
CCDC90B-208ENST00000527025 LEPROTO15243 131 aa5.5□□□□□ -1.53
CCDC90B-208ENST00000527025 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
CCDC90B-208ENST00000527025 PKIGQ9Y2B9 76 aa5.5□□□□□ -1.53
CCDC90B-208ENST00000527025 C20orf202A1L168 122 aa5.49□□□□□ -1.53
CCDC90B-208ENST00000527025 NDUFC2-KCTD14E9PQ53 114 aa5.49□□□□□ -1.53
CCDC90B-208ENST00000527025 HERVK_113P61574 105 aa5.49□□□□□ -1.53
CCDC90B-208ENST00000527025 PRR3P79522 188 aaKnown RBP5.49□□□□□ -1.53
CCDC90B-208ENST00000527025 C9orf129Q5T035 196 aaKnown RBP5.49□□□□□ -1.53
CCDC90B-208ENST00000527025 PHF5AQ7RTV0 110 aaKnown RBP5.49□□□□□ -1.53
CCDC90B-208ENST00000527025 LINC00474Q9P2X8 69 aa5.49□□□□□ -1.53
CCDC90B-208ENST00000527025 IGKV2D-26A0A0A0MRZ7 120 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 J3QQQ9 107 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 GAGE2EQ4V326 116 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 ANKRD39Q53RE8 183 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 SFTA2Q6UW10 78 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 ATOH7Q8N100 152 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 PLEKHB2Q96CS7 222 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 GAGE2DQ9UEU5 116 aa5.48□□□□□ -1.53
CCDC90B-208ENST00000527025 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
CCDC90B-208ENST00000527025 SRSF9Q13242 221 aaKnown RBP eCLIP5.47□□□□□ -1.53
CCDC90B-208ENST00000527025 NDUFA12Q9UI09 145 aa5.47□□□□□ -1.53
CCDC90B-208ENST00000527025 ERG28Q9UKR5 140 aa5.47□□□□□ -1.53
CCDC90B-208ENST00000527025 AKR1D1P51857 326 aa5.46□□□□□ -1.54
CCDC90B-208ENST00000527025 C7orf33Q8WU49 177 aa5.46□□□□□ -1.54
CCDC90B-208ENST00000527025 MYMXA0A1B0GTQ4 84 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 LGALS3P17931 250 aaKnown RBP5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 PFN2P35080 140 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 NMUP48645 174 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 HERV-K104P63124 156 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 COX17Q14061 63 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 SERTAD4-AS1Q5TG53 156 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 FAM19A5Q7Z5A7 132 aaPredicted RBP5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 TTTY13Q9BZ97 58 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 XAGE1AQ9HD64 81 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
CCDC90B-208ENST00000527025 OXTP01178 125 aa5.44□□□□□ -1.54
CCDC90B-208ENST00000527025 A0A0J9YXY3 114 aa5.43□□□□□ -1.54
CCDC90B-208ENST00000527025 SMIM13P0DJ93 91 aa5.43□□□□□ -1.54
CCDC90B-208ENST00000527025 JOSD1Q15040 202 aaPredicted RBP5.43□□□□□ -1.54
CCDC90B-208ENST00000527025 Q8NDZ9 215 aa5.43□□□□□ -1.54
CCDC90B-208ENST00000527025 LITAFQ99732 161 aa5.43□□□□□ -1.54
CCDC90B-208ENST00000527025 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
CCDC90B-208ENST00000527025 TNXBP22105 4242 aa5.42□□□□□ -1.54
CCDC90B-208ENST00000527025 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
CCDC90B-208ENST00000527025 SCGB1D1O95968 90 aa5.42□□□□□ -1.54
CCDC90B-208ENST00000527025 MEIG1Q5JSS6 88 aa5.42□□□□□ -1.54
CCDC90B-208ENST00000527025 PCP2Q8IVA1 136 aa5.42□□□□□ -1.54
CCDC90B-208ENST00000527025 MIR7-3HGQ8N6C7 128 aa5.42□□□□□ -1.54
CCDC90B-208ENST00000527025 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
CCDC90B-208ENST00000527025 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
CCDC90B-208ENST00000527025 ZNF815PA8K554 130 aa5.41□□□□□ -1.54
CCDC90B-208ENST00000527025 VPREB1P12018 145 aa5.41□□□□□ -1.54
CCDC90B-208ENST00000527025 LINC00158P58513 81 aa5.41□□□□□ -1.54
CCDC90B-208ENST00000527025 PYY3Q5JQD4 70 aa5.41□□□□□ -1.54
CCDC90B-208ENST00000527025 ADAMTSL4-AS1Q5T5F5 129 aa5.41□□□□□ -1.54
CCDC90B-208ENST00000527025 LINC00587B1AMM8 73 aa5.4□□□□□ -1.54
CCDC90B-208ENST00000527025 M0QXV9 152 aa5.4□□□□□ -1.54
CCDC90B-208ENST00000527025 TIMM17BO60830 172 aa5.4□□□□□ -1.54
CCDC90B-208ENST00000527025 C1orf137Q5JT78 98 aa5.4□□□□□ -1.54
CCDC90B-208ENST00000527025 SPINK6Q6UWN8 80 aa5.4□□□□□ -1.54
CCDC90B-208ENST00000527025 DAND5Q8N907 189 aa5.4□□□□□ -1.54
CCDC90B-208ENST00000527025 C22orf24Q9Y442 160 aa5.4□□□□□ -1.54
CCDC90B-208ENST00000527025 HMCN2Q8NDA2 5059 aa5.4□□□□□ -1.55
CCDC90B-208ENST00000527025 LOC107984156A0A0G2JMH3 177 aa5.39□□□□□ -1.55
CCDC90B-208ENST00000527025 C21orf62-AS1Q17RA5 79 aa5.39□□□□□ -1.55
CCDC90B-208ENST00000527025 SOSTDC1Q6X4U4 206 aa5.39□□□□□ -1.55
CCDC90B-208ENST00000527025 ARL17AQ8IVW1 177 aa5.39□□□□□ -1.55
CCDC90B-208ENST00000527025 LINC01600Q96MT4 127 aa5.39□□□□□ -1.55
CCDC90B-208ENST00000527025 TP73-AS1Q9UF72 201 aa5.39□□□□□ -1.55
CCDC90B-208ENST00000527025 IGLV7-43P04211 117 aa5.38□□□□□ -1.55
CCDC90B-208ENST00000527025 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
CCDC90B-208ENST00000527025 HSBP1L1C9JCN9 74 aa5.37□□□□□ -1.55
CCDC90B-208ENST00000527025 BOD1L2Q8IYS8 172 aa5.37□□□□□ -1.55
CCDC90B-208ENST00000527025 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
CCDC90B-208ENST00000527025 COX8AP10176 69 aa5.36□□□□□ -1.55
CCDC90B-208ENST00000527025 MRPL55Q7Z7F7 128 aaKnown RBP5.36□□□□□ -1.55
CCDC90B-208ENST00000527025 LINC00167Q96N53 147 aa5.36□□□□□ -1.55
CCDC90B-208ENST00000527025 VAMP8Q9BV40 100 aa5.36□□□□□ -1.55
CCDC90B-208ENST00000527025 SPANXDQ9BXN6 97 aa5.36□□□□□ -1.55
CCDC90B-208ENST00000527025 SPANXCQ9NY87 97 aa5.36□□□□□ -1.55
CCDC90B-208ENST00000527025 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
CCDC90B-208ENST00000527025 GAGE10A6NGK3 116 aa5.35□□□□□ -1.55
CCDC90B-208ENST00000527025 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
CCDC90B-208ENST00000527025 DLEU1O43261 78 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms