RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 Q6ZRU5 148 aa7.88□□□□□ -1.15
PTPRK-216ENST00000524481 TM2D3Q9BRN9 247 aa7.88□□□□□ -1.15
PTPRK-216ENST00000524481 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
PTPRK-216ENST00000524481 TRAV8-4A0A0B4J246 113 aa7.88□□□□□ -1.15
PTPRK-216ENST00000524481 M0R2N4 97 aa7.88□□□□□ -1.15
PTPRK-216ENST00000524481 PSCAO43653 123 aa7.88□□□□□ -1.15
PTPRK-216ENST00000524481 PRR34Q9NV39 138 aa7.88□□□□□ -1.15
PTPRK-216ENST00000524481 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
PTPRK-216ENST00000524481 C6orf48Q9UBA6 75 aa7.87□□□□□ -1.15
PTPRK-216ENST00000524481 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-216ENST00000524481 A0A087WYN8 130 aa7.87□□□□□ -1.15
PTPRK-216ENST00000524481 LST1O00453 97 aa7.86□□□□□ -1.15
PTPRK-216ENST00000524481 C6orf99Q4VX62 202 aa7.86□□□□□ -1.15
PTPRK-216ENST00000524481 SMIM20Q8N5G0 67 aa7.86□□□□□ -1.15
PTPRK-216ENST00000524481 Q8NDZ9 215 aa7.86□□□□□ -1.15
PTPRK-216ENST00000524481 TRBV10-2A0A0K0K1G8 114 aa7.85□□□□□ -1.15
PTPRK-216ENST00000524481 CXCL5P42830 114 aa7.85□□□□□ -1.15
PTPRK-216ENST00000524481 KLK5Q9Y337 293 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-216ENST00000524481 H3BNG1 76 aa7.83□□□□□ -1.16
PTPRK-216ENST00000524481 LINC01556Q5JQF7 62 aa7.83□□□□□ -1.16
PTPRK-216ENST00000524481 DPH3Q96FX2 82 aa7.83□□□□□ -1.16
PTPRK-216ENST00000524481 C15orf53Q8NAA6 179 aa7.83□□□□□ -1.16
PTPRK-216ENST00000524481 IGKV2-24A0A0C4DH68 120 aa7.82□□□□□ -1.16
PTPRK-216ENST00000524481 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
PTPRK-216ENST00000524481 SYCNQ0VAF6 134 aa7.82□□□□□ -1.16
PTPRK-216ENST00000524481 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
PTPRK-216ENST00000524481 C15orf56Q8N910 161 aa7.81□□□□□ -1.16
PTPRK-216ENST00000524481 CCDC179H3BU77 68 aa7.81□□□□□ -1.16
PTPRK-216ENST00000524481 CMYA5Q8N3K9 4069 aa7.8□□□□□ -1.16
PTPRK-216ENST00000524481 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
PTPRK-216ENST00000524481 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
PTPRK-216ENST00000524481 RPL28P46779 137 aaKnown RBP7.8□□□□□ -1.16
PTPRK-216ENST00000524481 FUSP35637 526 aaKnown RBP eCLIP7.79□□□□□ -1.163e-6■■■■□ 20.3
PTPRK-216ENST00000524481 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
PTPRK-216ENST00000524481 COX17Q14061 63 aa7.79□□□□□ -1.16
PTPRK-216ENST00000524481 Q6ZRP5 223 aa7.78□□□□□ -1.16
PTPRK-216ENST00000524481 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
PTPRK-216ENST00000524481 NDUFV3P56181 108 aaKnown RBP7.77□□□□□ -1.16
PTPRK-216ENST00000524481 DNAH10OSP0CZ25 163 aa7.77□□□□□ -1.17
PTPRK-216ENST00000524481 NKAPP1Q8N9T2 125 aa7.77□□□□□ -1.17
PTPRK-216ENST00000524481 LYSTQ99698 3801 aa7.77□□□□□ -1.17
PTPRK-216ENST00000524481 DEFB105AQ8NG35 78 aa7.77□□□□□ -1.17
PTPRK-216ENST00000524481 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
PTPRK-216ENST00000524481 C9orf129Q5T035 196 aaKnown RBP7.76□□□□□ -1.17
PTPRK-216ENST00000524481 H0YGX0 51 aa7.76□□□□□ -1.17
PTPRK-216ENST00000524481 FAM19A5Q7Z5A7 132 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-216ENST00000524481 LAMTOR3Q9UHA4 124 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 MEGF8Q7Z7M0 2845 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 H3BT86 120 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 B9D2Q9BPU9 175 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 KRTAP26-1Q6PEX3 210 aa7.75□□□□□ -1.17
PTPRK-216ENST00000524481 HUWE1Q7Z6Z7 4374 aaKnown RBP7.74□□□□□ -1.17
PTPRK-216ENST00000524481 TRACP01848 142 aa7.73□□□□□ -1.17
PTPRK-216ENST00000524481 DNHD1Q96M86 4753 aa7.73□□□□□ -1.17
PTPRK-216ENST00000524481 ORMDL1Q9P0S3 153 aa7.73□□□□□ -1.17
PTPRK-216ENST00000524481 Q6ZQY7 126 aa7.72□□□□□ -1.17
PTPRK-216ENST00000524481 RMI2Q96E14 147 aa7.72□□□□□ -1.17
PTPRK-216ENST00000524481 TRAV23DV6A0A075B6W5 121 aa7.72□□□□□ -1.17
PTPRK-216ENST00000524481 NHLRC4P0CG21 123 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-216ENST00000524481 SERTAD4-AS1Q5TG53 156 aa7.71□□□□□ -1.18
PTPRK-216ENST00000524481 Q8N814 137 aa7.71□□□□□ -1.18
PTPRK-216ENST00000524481 hADV29S1A0JD25 119 aa7.7□□□□□ -1.18
PTPRK-216ENST00000524481 NDUFC2O95298 119 aa7.7□□□□□ -1.18
PTPRK-216ENST00000524481 DIRC1Q969H9 104 aa7.7□□□□□ -1.18
PTPRK-216ENST00000524481 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-216ENST00000524481 CHTF8P0CG12 524 aa7.68□□□□□ -1.18
PTPRK-216ENST00000524481 APLNQ9ULZ1 77 aa7.68□□□□□ -1.18
PTPRK-216ENST00000524481 C2orf48Q96LS8 159 aa7.68□□□□□ -1.18
PTPRK-216ENST00000524481 VPREB1P12018 145 aa7.67□□□□□ -1.18
PTPRK-216ENST00000524481 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
PTPRK-216ENST00000524481 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
PTPRK-216ENST00000524481 COX7BP24311 80 aa7.67□□□□□ -1.18
PTPRK-216ENST00000524481 M0R378 163 aa7.66□□□□□ -1.18
PTPRK-216ENST00000524481 LY6G6CO95867 125 aa7.66□□□□□ -1.18
PTPRK-216ENST00000524481 FAM236AA0A1B0GUQ0 79 aa7.66□□□□□ -1.18
PTPRK-216ENST00000524481 FAM236BA0A1B0GV22 79 aa7.66□□□□□ -1.18
PTPRK-216ENST00000524481 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
PTPRK-216ENST00000524481 FBN3Q75N90 2809 aa7.65□□□□□ -1.18
PTPRK-216ENST00000524481 LINC00575Q6W349 94 aa7.65□□□□□ -1.18
PTPRK-216ENST00000524481 IGKV3D-7A0A0C4DH55 119 aa7.64□□□□□ -1.19
PTPRK-216ENST00000524481 C9orf153Q5TBE3 101 aa7.64□□□□□ -1.19
PTPRK-216ENST00000524481 IGLV6-57P01721 117 aa7.64□□□□□ -1.19
PTPRK-216ENST00000524481 UBE2BP63146 152 aa7.64□□□□□ -1.19
PTPRK-216ENST00000524481 INAFM2P0DMQ5 153 aa7.63□□□□□ -1.19
PTPRK-216ENST00000524481 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
PTPRK-216ENST00000524481 NUPR2A6NF83 97 aa7.63□□□□□ -1.19
PTPRK-216ENST00000524481 TMEM256-PLSCR3K7ERE1 68 aa7.63□□□□□ -1.19
PTPRK-216ENST00000524481 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
PTPRK-216ENST00000524481 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
PTPRK-216ENST00000524481 LINC00167Q96N53 147 aa7.62□□□□□ -1.19
PTPRK-216ENST00000524481 DNAH10Q8IVF4 4471 aa7.62□□□□□ -1.19
PTPRK-216ENST00000524481 A0A096LNI7 61 aa7.61□□□□□ -1.19
PTPRK-216ENST00000524481 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
PTPRK-216ENST00000524481 NBDYA0A0U1RRE5 68 aa7.61□□□□□ -1.19
PTPRK-216ENST00000524481 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
PTPRK-216ENST00000524481 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
PTPRK-216ENST00000524481 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms