RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 COX6CP09669 75 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 LINC00313P59037 77 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 DEFB1P60022 68 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 SFTA2Q6UW10 78 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 C2orf82Q6UX34 121 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 DAND5Q8N907 189 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 COPS9Q8WXC6 57 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 DNAJC30Q96LL9 226 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 BPESC1Q9GZL8 116 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 TMEM126AQ9H061 195 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 SS18L2Q9UHA2 77 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 NDUFA12Q9UI09 145 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 LOC400499M0QZD8 3231 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 IGLV10-54A0A075B6I4 117 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 TRAV12-3A0A0B4J271 114 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 COX7A2LO14548 114 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 PSMB8P28062 276 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 DAD1P61803 113 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 SNRPD3P62318 126 aaKnown RBP2.85□□□□□ -1.95
SKP1-213ENST00000524288 UBE2D4Q9Y2X8 147 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 MGAQ8IWI9 3026 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 ACACBO00763 2458 aa2.85□□□□□ -1.95
SKP1-213ENST00000524288 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.85□□□□□ -1.953e-6■□□□□ 10.9
SKP1-213ENST00000524288 IGF2RP11717 2491 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 TACC2O95359 2948 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 A0A1W2PNM2 257 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 MSMBP08118 114 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.95
SKP1-213ENST00000524288 FAM74A4Q5TZK3 123 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 C5orf38Q86SI9 138 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 LINC00643Q86TS7 51 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 WFDC11Q8NEX6 87 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 LINC00308Q8TCZ7 52 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 HIVEP3Q5T1R4 2406 aa2.84□□□□□ -1.95
SKP1-213ENST00000524288 A0A096LNT2 108 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 A0A1B0GX51 115 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 H3BUX3 64 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 H7C2G1 150 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 PSCAO43653 123 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 HERVK_113P63121 156 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 FAM19A5Q7Z5A7 132 aaPredicted RBP2.83□□□□□ -1.96
SKP1-213ENST00000524288 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 LINC00526Q96FQ7 95 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 ZNF625Q96I27 306 aaPredicted RBP2.83□□□□□ -1.96
SKP1-213ENST00000524288 VPREB3Q9UKI3 123 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 C22orf24Q9Y442 160 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 PKD1L2Q7Z442 2459 aa2.83□□□□□ -1.96
SKP1-213ENST00000524288 KMT2BQ9UMN6 2715 aaPredicted RBP2.83□□□□□ -1.96
SKP1-213ENST00000524288 SMG1Q96Q15 3661 aaKnown RBP2.82□□□□□ -1.96
SKP1-213ENST00000524288 LRBAP50851 2863 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 IGHV3-64A0A075B6Q5 118 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 UQCRQO14949 82 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 CIRBPQ14011 172 aaKnown RBP2.82□□□□□ -1.96
SKP1-213ENST00000524288 SPINK13Q1W4C9 94 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 FAM229BQ4G0N7 80 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 MEIG1Q5JSS6 88 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 SMCR5Q8TEV8 140 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 OBSCN-AS1Q96MR7 158 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 ADGRG4Q8IZF6 3080 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 BOD1L1Q8NFC6 3051 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 USP24Q9UPU5 2620 aa2.82□□□□□ -1.96
SKP1-213ENST00000524288 TRAV12-2A0A075B6T6 113 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 TRBV10-1A0A0K0K1A3 114 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 FAM236AA0A1B0GUQ0 79 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 FAM236BA0A1B0GV22 79 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 ATOX1O00244 68 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 CRYGAP11844 174 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 RPL28P46779 137 aaKnown RBP2.81□□□□□ -1.96
SKP1-213ENST00000524288 BLCAPP62952 87 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 Q6JHZ5 121 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 SOSTDC1Q6X4U4 206 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 SMIM20Q8N5G0 67 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 CDKN2A-AS1Q9UH64 79 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 CR1P17927 2039 aa2.81□□□□□ -1.96
SKP1-213ENST00000524288 IGKV3-7A0A075B6H7 116 aa2.8□□□□□ -1.96
SKP1-213ENST00000524288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.8□□□□□ -1.96
SKP1-213ENST00000524288 TRAV13-2A0A0B4J235 113 aa2.8□□□□□ -1.96
SKP1-213ENST00000524288 IGKV2-29A2NJV5 120 aaPredicted RBP2.8□□□□□ -1.96
SKP1-213ENST00000524288 COX7CP15954 63 aa2.8□□□□□ -1.96
SKP1-213ENST00000524288 RPS28P62857 69 aaKnown RBP2.8□□□□□ -1.96
SKP1-213ENST00000524288 Q8N2B8 174 aa2.8□□□□□ -1.96
SKP1-213ENST00000524288 ATMQ13315 3056 aa2.8□□□□□ -1.96
SKP1-213ENST00000524288 BAALC-AS2P0C853 105 aa2.79□□□□□ -1.96
SKP1-213ENST00000524288 LINC00694P0DN24 101 aa2.79□□□□□ -1.96
SKP1-213ENST00000524288 COX6A2Q02221 97 aa2.79□□□□□ -1.96
SKP1-213ENST00000524288 C9orf153Q5TBE3 101 aa2.79□□□□□ -1.96
SKP1-213ENST00000524288 ATP5EP2Q5VTU8 51 aa2.79□□□□□ -1.96
SKP1-213ENST00000524288 DEFB104AQ8WTQ1 72 aa2.79□□□□□ -1.96
SKP1-213ENST00000524288 CHD8Q9HCK8 2581 aa2.79□□□□□ -1.96
SKP1-213ENST00000524288 CEP295Q9C0D2 2601 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 SPTAN1Q13813 2472 aaKnown RBP2.78□□□□□ -1.96
SKP1-213ENST00000524288 SPTA1P02549 2419 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 FAM208BQ5VWN6 2430 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 H0YGX0 51 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 J3KT08 172 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 CRPP02741 224 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 TMEM258P61165 79 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 DEFB112Q30KQ8 113 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 TMEM86BQ8N661 226 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms