RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SNHG12Q9BXW3 62 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 SPANXCQ9NY87 97 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 TMEM238LA0A1B0GVL6 79 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 FAM168BA1KXE4 195 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 A6NJY4 79 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 CNBPP62633 177 aaKnown RBP6.03□□□□□ -1.44
SDCBP-212ENST00000523483 Q1RN00 199 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 HAMPP81172 84 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 C9orf163Q8N9P6 203 aa6.02□□□□□ -1.45
SDCBP-212ENST00000523483 COPS9Q8WXC6 57 aa6.02□□□□□ -1.45
SDCBP-212ENST00000523483 IFITM1P13164 125 aa6.02□□□□□ -1.45
SDCBP-212ENST00000523483 TAL2Q16559 108 aa6.02□□□□□ -1.45
SDCBP-212ENST00000523483 Q6ZVH6 145 aa6.02□□□□□ -1.45
SDCBP-212ENST00000523483 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
SDCBP-212ENST00000523483 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
SDCBP-212ENST00000523483 F8WDY8 70 aa6.01□□□□□ -1.45
SDCBP-212ENST00000523483 S100A7L2Q5SY68 101 aa6.01□□□□□ -1.45
SDCBP-212ENST00000523483 Q8NDZ9 215 aa6□□□□□ -1.45
SDCBP-212ENST00000523483 CFC1BP0CG36 223 aa6□□□□□ -1.45
SDCBP-212ENST00000523483 CFC1P0CG37 223 aa6□□□□□ -1.45
SDCBP-212ENST00000523483 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
SDCBP-212ENST00000523483 IGKV2-28A0A075B6P5 120 aa5.99□□□□□ -1.45
SDCBP-212ENST00000523483 PANO1I0J062 215 aa5.99□□□□□ -1.45
SDCBP-212ENST00000523483 IGKV2D-28P01615 120 aa5.99□□□□□ -1.45
SDCBP-212ENST00000523483 RYR2Q92736 4967 aa5.99□□□□□ -1.45
SDCBP-212ENST00000523483 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
SDCBP-212ENST00000523483 RPL37AP8A6NKH3 93 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 C16orf90A8MZG2 172 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 RPL13AP40429 203 aaKnown RBP5.98□□□□□ -1.45
SDCBP-212ENST00000523483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-212ENST00000523483 RNF151Q2KHN1 245 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 PGPEP1Q9NXJ5 209 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 DNAH17Q9UFH2 4485 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 LINC00336Q6ZUF6 198 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 LINC00337Q8N6G1 96 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 RYR3Q15413 4870 aa5.98□□□□□ -1.45
SDCBP-212ENST00000523483 PSMB2P49721 201 aa5.97□□□□□ -1.45
SDCBP-212ENST00000523483 PRO1854Q9UHT4 67 aa5.97□□□□□ -1.45
SDCBP-212ENST00000523483 LOC107984156A0A0G2JMH3 177 aa5.97□□□□□ -1.45
SDCBP-212ENST00000523483 A0A1W2PNN7 141 aa5.97□□□□□ -1.45
SDCBP-212ENST00000523483 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
SDCBP-212ENST00000523483 COL5A1-AS1Q5SY13 56 aa5.97□□□□□ -1.45
SDCBP-212ENST00000523483 ARL17AQ8IVW1 177 aa5.97□□□□□ -1.45
SDCBP-212ENST00000523483 M0QXV9 152 aa5.96□□□□□ -1.45
SDCBP-212ENST00000523483 UBE2BP63146 152 aa5.96□□□□□ -1.45
SDCBP-212ENST00000523483 DNAH6Q9C0G6 4158 aa5.96□□□□□ -1.46
SDCBP-212ENST00000523483 H3BUT2 72 aa5.96□□□□□ -1.46
SDCBP-212ENST00000523483 A0A087WYN8 130 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 VPREB1P12018 145 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 SCGB1C2P0DMR2 95 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 FAT2Q9NYQ8 4349 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 PKHD1P08F94 4074 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 TRAV13-2A0A0B4J235 113 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
SDCBP-212ENST00000523483 FAM30AQ9NZY2 134 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 HECTD4Q9Y4D8 3996 aa5.95□□□□□ -1.46
SDCBP-212ENST00000523483 LINC00474Q9P2X8 69 aa5.94□□□□□ -1.46
SDCBP-212ENST00000523483 C7orf33Q8WU49 177 aa5.94□□□□□ -1.46
SDCBP-212ENST00000523483 PKIGQ9Y2B9 76 aa5.94□□□□□ -1.46
SDCBP-212ENST00000523483 DNAH11Q96DT5 4516 aa5.93□□□□□ -1.46
SDCBP-212ENST00000523483 A0A0B4J2C4 111 aa5.93□□□□□ -1.46
SDCBP-212ENST00000523483 MRPL55Q7Z7F7 128 aaKnown RBP5.93□□□□□ -1.46
SDCBP-212ENST00000523483 NDUFC2O95298 119 aa5.93□□□□□ -1.46
SDCBP-212ENST00000523483 TMEM126AQ9H061 195 aa5.93□□□□□ -1.46
SDCBP-212ENST00000523483 M0R378 163 aa5.92□□□□□ -1.46
SDCBP-212ENST00000523483 TSPAN13O95857 204 aa5.92□□□□□ -1.46
SDCBP-212ENST00000523483 LINC00167Q96N53 147 aa5.92□□□□□ -1.46
SDCBP-212ENST00000523483 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
SDCBP-212ENST00000523483 TAX1BP3O14907 124 aa5.92□□□□□ -1.46
SDCBP-212ENST00000523483 SPACA4Q8TDM5 124 aa5.92□□□□□ -1.46
SDCBP-212ENST00000523483 SMIM11BQ8TCY0 68 aa5.91□□□□□ -1.46
SDCBP-212ENST00000523483 C6orf99Q4VX62 202 aa5.91□□□□□ -1.46
SDCBP-212ENST00000523483 TRAV23DV6A0A075B6W5 121 aa5.9□□□□□ -1.46
SDCBP-212ENST00000523483 VAMP3Q15836 100 aa5.9□□□□□ -1.46
SDCBP-212ENST00000523483 SCXQ7RTU7 201 aa5.9□□□□□ -1.46
SDCBP-212ENST00000523483 DNAH5Q8TE73 4624 aa5.9□□□□□ -1.47
SDCBP-212ENST00000523483 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.47
SDCBP-212ENST00000523483 A0A1B0GWB2 263 aa5.9□□□□□ -1.47
SDCBP-212ENST00000523483 TRIAP1O43715 76 aa5.89□□□□□ -1.47
SDCBP-212ENST00000523483 PKD1P98161 4303 aa5.89□□□□□ -1.47
SDCBP-212ENST00000523483 TRBV10-2A0A0K0K1G8 114 aa5.88□□□□□ -1.47
SDCBP-212ENST00000523483 C9orf118A6NHY6 69 aa5.88□□□□□ -1.47
SDCBP-212ENST00000523483 COX6CP09669 75 aa5.88□□□□□ -1.47
SDCBP-212ENST00000523483 LBHQ53QV2 105 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-212ENST00000523483 CLEC2BQ92478 149 aa5.88□□□□□ -1.47
SDCBP-212ENST00000523483 A0A1B0GV90 55 aa5.88□□□□□ -1.47
SDCBP-212ENST00000523483 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
SDCBP-212ENST00000523483 ZNF73O43830 326 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-212ENST00000523483 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-212ENST00000523483 FABP2P12104 132 aa5.88□□□□□ -1.47
SDCBP-212ENST00000523483 IGLV6-57P01721 117 aa5.87□□□□□ -1.47
SDCBP-212ENST00000523483 DIRC1Q969H9 104 aa5.87□□□□□ -1.47
SDCBP-212ENST00000523483 ETDCA0A1B0GVM5 59 aa5.87□□□□□ -1.47
SDCBP-212ENST00000523483 MTURNQ8N3F0 131 aa5.87□□□□□ -1.47
SDCBP-212ENST00000523483 KRTAP11-1Q8IUC1 163 aa5.86□□□□□ -1.47
SDCBP-212ENST00000523483 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
SDCBP-212ENST00000523483 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms