RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 HIST1H2BBP33778 126 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 HIST1H2BDP58876 126 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 HIST1H2BCP62807 126 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 HIST2H2BEQ16778 126 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 LBHQ53QV2 105 aaPredicted RBP9.09□□□□□ -0.95
PCM1-218ENST00000523055 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.09□□□□□ -0.95
PCM1-218ENST00000523055 HIST1H2BHQ93079 126 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 LINC00167Q96N53 147 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 HIST1H2BNQ99877 126 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 HIST1H2BMQ99879 126 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 SND1-IT1Q9HBX3 110 aa9.09□□□□□ -0.95
PCM1-218ENST00000523055 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
PCM1-218ENST00000523055 Q8NDZ9 215 aa9.08□□□□□ -0.96
PCM1-218ENST00000523055 IGLV5-37A0A075B6J1 123 aa9.07□□□□□ -0.96
PCM1-218ENST00000523055 FABP4P15090 132 aa9.07□□□□□ -0.96
PCM1-218ENST00000523055 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
PCM1-218ENST00000523055 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
PCM1-218ENST00000523055 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
PCM1-218ENST00000523055 NKAPP1Q8N9T2 125 aa9.05□□□□□ -0.96
PCM1-218ENST00000523055 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
PCM1-218ENST00000523055 VPREB1P12018 145 aa9.05□□□□□ -0.96
PCM1-218ENST00000523055 COX17Q14061 63 aa9.05□□□□□ -0.96
PCM1-218ENST00000523055 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
PCM1-218ENST00000523055 ZNF861PO60384 105 aa9.04□□□□□ -0.96
PCM1-218ENST00000523055 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
PCM1-218ENST00000523055 TSPEAR-AS2P59090 65 aa9.04□□□□□ -0.96
PCM1-218ENST00000523055 BCE1O60756 84 aa9.03□□□□□ -0.96
PCM1-218ENST00000523055 LINC00158P58513 81 aa9.03□□□□□ -0.96
PCM1-218ENST00000523055 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
PCM1-218ENST00000523055 SFTA2Q6UW10 78 aa9.03□□□□□ -0.96
PCM1-218ENST00000523055 HSPB8Q9UJY1 196 aa9.02□□□□□ -0.97
PCM1-218ENST00000523055 SMIM13P0DJ93 91 aa9.01□□□□□ -0.97
PCM1-218ENST00000523055 NDUFA12Q9UI09 145 aa9□□□□□ -0.97
PCM1-218ENST00000523055 TMEM238C9JI98 176 aa8.99□□□□□ -0.97
PCM1-218ENST00000523055 MEIG1Q5JSS6 88 aa8.99□□□□□ -0.97
PCM1-218ENST00000523055 IGLV1-50A0A075B6I6 118 aa8.98□□□□□ -0.97
PCM1-218ENST00000523055 DPM2O94777 84 aa8.98□□□□□ -0.97
PCM1-218ENST00000523055 PLNP26678 52 aa8.98□□□□□ -0.97
PCM1-218ENST00000523055 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
PCM1-218ENST00000523055 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
PCM1-218ENST00000523055 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
PCM1-218ENST00000523055 RPL28P46779 137 aaKnown RBP8.97□□□□□ -0.97
PCM1-218ENST00000523055 RPL24P83731 157 aaKnown RBP8.97□□□□□ -0.97
PCM1-218ENST00000523055 LEPROTO15243 131 aa8.97□□□□□ -0.97
PCM1-218ENST00000523055 IGKCP01834 107 aa8.97□□□□□ -0.97
PCM1-218ENST00000523055 PRLHP81277 87 aa8.97□□□□□ -0.97
PCM1-218ENST00000523055 MAP1LC3CQ9BXW4 147 aa8.97□□□□□ -0.97
PCM1-218ENST00000523055 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
PCM1-218ENST00000523055 UBE2AP49459 152 aa8.96□□□□□ -0.98
PCM1-218ENST00000523055 HERV-K104P63124 156 aa8.96□□□□□ -0.98
PCM1-218ENST00000523055 DAND5Q8N907 189 aa8.96□□□□□ -0.98
PCM1-218ENST00000523055 MYMXA0A1B0GTQ4 84 aa8.95□□□□□ -0.98
PCM1-218ENST00000523055 J3QQQ9 107 aa8.95□□□□□ -0.98
PCM1-218ENST00000523055 M0R378 163 aa8.95□□□□□ -0.98
PCM1-218ENST00000523055 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
PCM1-218ENST00000523055 A0A087X002 238 aa8.94□□□□□ -0.98
PCM1-218ENST00000523055 A0A0U1RQV1 116 aa8.94□□□□□ -0.98
PCM1-218ENST00000523055 NCR3O14931 201 aa8.94□□□□□ -0.98
PCM1-218ENST00000523055 PLEKHB2Q96CS7 222 aa8.94□□□□□ -0.98
PCM1-218ENST00000523055 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
PCM1-218ENST00000523055 HERVK_113P61574 105 aa8.93□□□□□ -0.98
PCM1-218ENST00000523055 FAM19A1Q7Z5A9 133 aa8.93□□□□□ -0.98
PCM1-218ENST00000523055 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
PCM1-218ENST00000523055 LGALS3P17931 250 aaKnown RBP8.9□□□□□ -0.98
PCM1-218ENST00000523055 FSIP2Q5CZC0 6907 aa8.9□□□□□ -0.99
PCM1-218ENST00000523055 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
PCM1-218ENST00000523055 HIST3H2BBQ8N257 126 aa8.89□□□□□ -0.99
PCM1-218ENST00000523055 LINC00587B1AMM8 73 aa8.88□□□□□ -0.99
PCM1-218ENST00000523055 E9PLD3 99 aa8.88□□□□□ -0.99
PCM1-218ENST00000523055 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
PCM1-218ENST00000523055 C3orf79P0CE67 100 aa8.88□□□□□ -0.99
PCM1-218ENST00000523055 NMUP48645 174 aa8.88□□□□□ -0.99
PCM1-218ENST00000523055 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
PCM1-218ENST00000523055 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
PCM1-218ENST00000523055 S100A6P06703 90 aa8.87□□□□□ -0.99
PCM1-218ENST00000523055 SNRPEP62304 92 aaKnown RBP8.87□□□□□ -0.99
PCM1-218ENST00000523055 KRTAP13-2Q52LG2 175 aa8.87□□□□□ -0.99
PCM1-218ENST00000523055 A0A0J9YXY3 114 aa8.86□□□□□ -0.99
PCM1-218ENST00000523055 CRYGAP11844 174 aa8.86□□□□□ -0.99
PCM1-218ENST00000523055 NPC2P61916 151 aa8.86□□□□□ -0.99
PCM1-218ENST00000523055 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
PCM1-218ENST00000523055 PET117Q6UWS5 81 aa8.86□□□□□ -0.99
PCM1-218ENST00000523055 SOSTDC1Q6X4U4 206 aa8.86□□□□□ -0.99
PCM1-218ENST00000523055 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
PCM1-218ENST00000523055 IGKV2D-26A0A0A0MRZ7 120 aa8.85□□□□□ -0.99
PCM1-218ENST00000523055 LOC107984156A0A0G2JMH3 177 aa8.85□□□□□ -0.99
PCM1-218ENST00000523055 C5orf52A6NGY3 159 aa8.85□□□□□ -0.99
PCM1-218ENST00000523055 ARL17AQ8IVW1 177 aa8.85□□□□□ -0.99
PCM1-218ENST00000523055 HIST1H2BLQ99880 126 aa8.85□□□□□ -0.99
PCM1-218ENST00000523055 TTTY13Q9BZ97 58 aa8.85□□□□□ -0.99
PCM1-218ENST00000523055 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
PCM1-218ENST00000523055 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
PCM1-218ENST00000523055 PRYO14603 147 aa8.84□□□□□ -0.99
PCM1-218ENST00000523055 KRTDAPP60985 99 aa8.84□□□□□ -0.99
PCM1-218ENST00000523055 SPRR1AP35321 89 aa8.83□□□□□ -1
PCM1-218ENST00000523055 TYMSOSQ8TAI1 123 aa8.83□□□□□ -1
PCM1-218ENST00000523055 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
PCM1-218ENST00000523055 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
PCM1-218ENST00000523055 MIEN1Q9BRT3 115 aa8.82□□□□□ -1
PCM1-218ENST00000523055 TSPAN13O95857 204 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms