RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 E9PLD3 99 aa5.79□□□□□ -1.48
CLK4-209ENST00000521621 VPREB1P12018 145 aa5.79□□□□□ -1.48
CLK4-209ENST00000521621 PPDPFQ9H3Y8 114 aa5.79□□□□□ -1.48
CLK4-209ENST00000521621 MT1HL1P0DM35 61 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 KRTAP11-1Q8IUC1 163 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 DIRC1Q969H9 104 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 XAGE1AQ9HD64 81 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 J3QQQ9 107 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 ATP6V1G1O75348 118 aa5.78□□□□□ -1.48
CLK4-209ENST00000521621 TIMM17BO60830 172 aa5.77□□□□□ -1.49
CLK4-209ENST00000521621 FABP4P15090 132 aa5.77□□□□□ -1.49
CLK4-209ENST00000521621 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
CLK4-209ENST00000521621 H0Y9J4 135 aa5.77□□□□□ -1.49
CLK4-209ENST00000521621 J3QL48 77 aa5.77□□□□□ -1.49
CLK4-209ENST00000521621 BCE1O60756 84 aa5.77□□□□□ -1.49
CLK4-209ENST00000521621 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
CLK4-209ENST00000521621 SNRPEP62304 92 aaKnown RBP5.77□□□□□ -1.49
CLK4-209ENST00000521621 IGLV1-50A0A075B6I6 118 aa5.76□□□□□ -1.49
CLK4-209ENST00000521621 IGKV2D-26A0A0A0MRZ7 120 aa5.76□□□□□ -1.49
CLK4-209ENST00000521621 LINC00167Q96N53 147 aa5.76□□□□□ -1.49
CLK4-209ENST00000521621 ZNF861PO60384 105 aa5.76□□□□□ -1.49
CLK4-209ENST00000521621 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
CLK4-209ENST00000521621 UBE2BP63146 152 aa5.76□□□□□ -1.49
CLK4-209ENST00000521621 KRTAP13-1Q8IUC0 172 aa5.76□□□□□ -1.49
CLK4-209ENST00000521621 TRBV10-2A0A0K0K1G8 114 aa5.75□□□□□ -1.49
CLK4-209ENST00000521621 NDUFC2O95298 119 aa5.75□□□□□ -1.49
CLK4-209ENST00000521621 C3orf79P0CE67 100 aa5.75□□□□□ -1.49
CLK4-209ENST00000521621 NKAPP1Q8N9T2 125 aa5.75□□□□□ -1.49
CLK4-209ENST00000521621 PFN2P35080 140 aa5.75□□□□□ -1.49
CLK4-209ENST00000521621 C20orf202A1L168 122 aa5.74□□□□□ -1.49
CLK4-209ENST00000521621 M0R378 163 aa5.74□□□□□ -1.49
CLK4-209ENST00000521621 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
CLK4-209ENST00000521621 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
CLK4-209ENST00000521621 LINC00158P58513 81 aa5.74□□□□□ -1.49
CLK4-209ENST00000521621 SMIM13P0DJ93 91 aa5.73□□□□□ -1.49
CLK4-209ENST00000521621 RPL28P46779 137 aaKnown RBP5.73□□□□□ -1.49
CLK4-209ENST00000521621 CTAG1AP78358 180 aa5.73□□□□□ -1.49
CLK4-209ENST00000521621 HIST3H2BBQ8N257 126 aa5.73□□□□□ -1.49
CLK4-209ENST00000521621 H0Y8G0 127 aa5.72□□□□□ -1.49
CLK4-209ENST00000521621 PRYO14603 147 aa5.72□□□□□ -1.49
CLK4-209ENST00000521621 SPRR1AP35321 89 aa5.72□□□□□ -1.49
CLK4-209ENST00000521621 MEIG1Q5JSS6 88 aa5.72□□□□□ -1.49
CLK4-209ENST00000521621 MIR7-3HGQ8N6C7 128 aa5.72□□□□□ -1.49
CLK4-209ENST00000521621 KRTAP1-4P0C5Y4 121 aa5.71□□□□□ -1.5
CLK4-209ENST00000521621 Q8NDZ9 215 aa5.71□□□□□ -1.5
CLK4-209ENST00000521621 KCNQ1DNQ9H478 68 aa5.71□□□□□ -1.5
CLK4-209ENST00000521621 LINC00337Q8N6G1 96 aa5.71□□□□□ -1.5
CLK4-209ENST00000521621 CBY1Q9Y3M2 126 aa5.71□□□□□ -1.5
CLK4-209ENST00000521621 TNXBP22105 4242 aa5.71□□□□□ -1.5
CLK4-209ENST00000521621 LITAFQ99732 161 aa5.7□□□□□ -1.5
CLK4-209ENST00000521621 HIST1H2BLQ99880 126 aa5.7□□□□□ -1.5
CLK4-209ENST00000521621 PMCHL2Q9BQD1 86 aa5.7□□□□□ -1.5
CLK4-209ENST00000521621 SPANXB1Q9NS25 103 aaPredicted RBP5.7□□□□□ -1.5
CLK4-209ENST00000521621 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
CLK4-209ENST00000521621 FAM229BQ4G0N7 80 aa5.7□□□□□ -1.5
CLK4-209ENST00000521621 Q6ZVH6 145 aa5.7□□□□□ -1.5
CLK4-209ENST00000521621 TMEM126AQ9H061 195 aa5.69□□□□□ -1.5
CLK4-209ENST00000521621 KRTDAPP60985 99 aa5.69□□□□□ -1.5
CLK4-209ENST00000521621 C5orf52A6NGY3 159 aa5.68□□□□□ -1.5
CLK4-209ENST00000521621 KRTAP4-16G5E9R7 235 aaPredicted RBP5.68□□□□□ -1.5
CLK4-209ENST00000521621 COPS9Q8WXC6 57 aa5.68□□□□□ -1.5
CLK4-209ENST00000521621 SPANXDQ9BXN6 97 aa5.68□□□□□ -1.5
CLK4-209ENST00000521621 SPANXCQ9NY87 97 aa5.68□□□□□ -1.5
CLK4-209ENST00000521621 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
CLK4-209ENST00000521621 BOD1L2Q8IYS8 172 aa5.67□□□□□ -1.5
CLK4-209ENST00000521621 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
CLK4-209ENST00000521621 RPL37AP8A6NKH3 93 aa5.67□□□□□ -1.5
CLK4-209ENST00000521621 S100A6P06703 90 aa5.67□□□□□ -1.5
CLK4-209ENST00000521621 IFITM1P13164 125 aa5.67□□□□□ -1.5
CLK4-209ENST00000521621 S100A2P29034 98 aa5.67□□□□□ -1.5
CLK4-209ENST00000521621 S100A12P80511 92 aa5.67□□□□□ -1.5
CLK4-209ENST00000521621 ADAMTSL4-AS1Q5T5F5 129 aa5.66□□□□□ -1.5
CLK4-209ENST00000521621 ZNF815PA8K554 130 aa5.65□□□□□ -1.5
CLK4-209ENST00000521621 LINC00308Q8TCZ7 52 aa5.65□□□□□ -1.5
CLK4-209ENST00000521621 GAGE10A6NGK3 116 aa5.65□□□□□ -1.51
CLK4-209ENST00000521621 TMEM238C9JI98 176 aa5.65□□□□□ -1.51
CLK4-209ENST00000521621 UBE2AP49459 152 aa5.65□□□□□ -1.51
CLK4-209ENST00000521621 SOSTDC1Q6X4U4 206 aa5.65□□□□□ -1.51
CLK4-209ENST00000521621 MIEN1Q9BRT3 115 aa5.65□□□□□ -1.51
CLK4-209ENST00000521621 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
CLK4-209ENST00000521621 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
CLK4-209ENST00000521621 ANKRD39Q53RE8 183 aa5.64□□□□□ -1.51
CLK4-209ENST00000521621 LINC00518Q8N0U6 118 aa5.64□□□□□ -1.51
CLK4-209ENST00000521621 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
CLK4-209ENST00000521621 A0A0U1RRA0 63 aa5.63□□□□□ -1.51
CLK4-209ENST00000521621 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
CLK4-209ENST00000521621 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
CLK4-209ENST00000521621 TRBV10-3A0A0K0K1G6 114 aa5.63□□□□□ -1.51
CLK4-209ENST00000521621 DDTP30046 118 aa5.63□□□□□ -1.51
CLK4-209ENST00000521621 FAM19A1Q7Z5A9 133 aa5.62□□□□□ -1.51
CLK4-209ENST00000521621 TRBV7-6A0A0J9YX20 115 aa5.62□□□□□ -1.51
CLK4-209ENST00000521621 B5MCH6 92 aa5.62□□□□□ -1.51
CLK4-209ENST00000521621 DLEU1O43261 78 aa5.62□□□□□ -1.51
CLK4-209ENST00000521621 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
CLK4-209ENST00000521621 NCR3O14931 201 aa5.61□□□□□ -1.51
CLK4-209ENST00000521621 CRYGAP11844 174 aa5.61□□□□□ -1.51
CLK4-209ENST00000521621 DAND5Q8N907 189 aa5.61□□□□□ -1.51
CLK4-209ENST00000521621 HSBP1L1C9JCN9 74 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms