RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 TRAV12-1A0A0B4J245 112 aa12.08□□□□□ -0.48
SNHG6-203ENST00000520944 TMEM238C9JI98 176 aa12.08□□□□□ -0.48
SNHG6-203ENST00000520944 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
SNHG6-203ENST00000520944 PRLHP81277 87 aa12.07□□□□□ -0.48
SNHG6-203ENST00000520944 FAM229BQ4G0N7 80 aa12.07□□□□□ -0.48
SNHG6-203ENST00000520944 ATP6V1G1O75348 118 aa12.06□□□□□ -0.48
SNHG6-203ENST00000520944 YPEL4Q96NS1 127 aa12.06□□□□□ -0.48
SNHG6-203ENST00000520944 A0A0U1RRA0 63 aa12.05□□□□□ -0.48
SNHG6-203ENST00000520944 M0R378 163 aa12.04□□□□□ -0.48
SNHG6-203ENST00000520944 HSBP1O75506 76 aa12.04□□□□□ -0.48
SNHG6-203ENST00000520944 Q8NDZ9 215 aa12.04□□□□□ -0.48
SNHG6-203ENST00000520944 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
SNHG6-203ENST00000520944 KRTAP13-2Q52LG2 175 aa12.03□□□□□ -0.48
SNHG6-203ENST00000520944 CBLN2Q8IUK8 224 aa12.02□□□□□ -0.49
SNHG6-203ENST00000520944 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
SNHG6-203ENST00000520944 FAM19A2Q8N3H0 131 aa12.01□□□□□ -0.49
SNHG6-203ENST00000520944 SMIM13P0DJ93 91 aa12□□□□□ -0.49
SNHG6-203ENST00000520944 HERV-K104P63124 156 aa12□□□□□ -0.49
SNHG6-203ENST00000520944 LINC00587B1AMM8 73 aa11.99□□□□□ -0.49
SNHG6-203ENST00000520944 LINC00304Q8N9R0 145 aa11.99□□□□□ -0.49
SNHG6-203ENST00000520944 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
SNHG6-203ENST00000520944 H0Y8G0 127 aa11.98□□□□□ -0.49
SNHG6-203ENST00000520944 BOD1L2Q8IYS8 172 aa11.98□□□□□ -0.49
SNHG6-203ENST00000520944 HIGD2AQ9BW72 106 aa11.98□□□□□ -0.49
SNHG6-203ENST00000520944 MUC2Q02817 5179 aa11.97□□□□□ -0.49
SNHG6-203ENST00000520944 MYMXA0A1B0GTQ4 84 aa11.96□□□□□ -0.49
SNHG6-203ENST00000520944 TRGC2P03986 189 aa11.96□□□□□ -0.49
SNHG6-203ENST00000520944 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.49
SNHG6-203ENST00000520944 NDUFA12Q9UI09 145 aa11.96□□□□□ -0.49
SNHG6-203ENST00000520944 MAP1LC3CQ9BXW4 147 aa11.95□□□□□ -0.5
SNHG6-203ENST00000520944 LEPROTL1O95214 131 aa11.94□□□□□ -0.5
SNHG6-203ENST00000520944 NCR3O14931 201 aa11.93□□□□□ -0.5
SNHG6-203ENST00000520944 PRYO14603 147 aa11.92□□□□□ -0.5
SNHG6-203ENST00000520944 PLNP26678 52 aa11.91□□□□□ -0.5
SNHG6-203ENST00000520944 CTAG1AP78358 180 aa11.91□□□□□ -0.5
SNHG6-203ENST00000520944 RETNLBQ9BQ08 111 aa11.91□□□□□ -0.5
SNHG6-203ENST00000520944 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
SNHG6-203ENST00000520944 SERF1AO75920 110 aa11.9□□□□□ -0.5
SNHG6-203ENST00000520944 S100A12P80511 92 aa11.9□□□□□ -0.5
SNHG6-203ENST00000520944 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
SNHG6-203ENST00000520944 LEPROTO15243 131 aa11.89□□□□□ -0.51
SNHG6-203ENST00000520944 SPRR4Q96PI1 79 aa11.89□□□□□ -0.51
SNHG6-203ENST00000520944 KCNQ1DNQ9H478 68 aa11.89□□□□□ -0.51
SNHG6-203ENST00000520944 ETDCA0A1B0GVM5 59 aa11.88□□□□□ -0.51
SNHG6-203ENST00000520944 C3orf22Q8N5N4 141 aa11.88□□□□□ -0.51
SNHG6-203ENST00000520944 LINC00337Q8N6G1 96 aa11.88□□□□□ -0.51
SNHG6-203ENST00000520944 FABP4P15090 132 aa11.87□□□□□ -0.51
SNHG6-203ENST00000520944 HERVK_113P61574 105 aa11.87□□□□□ -0.51
SNHG6-203ENST00000520944 DPM2O94777 84 aa11.86□□□□□ -0.51
SNHG6-203ENST00000520944 LINC00310P59036 64 aa11.86□□□□□ -0.51
SNHG6-203ENST00000520944 TRBV10-3A0A0K0K1G6 114 aa11.85□□□□□ -0.51
SNHG6-203ENST00000520944 J3QQQ9 107 aa11.85□□□□□ -0.51
SNHG6-203ENST00000520944 SPRR1AP35321 89 aa11.85□□□□□ -0.51
SNHG6-203ENST00000520944 TSPEAR-AS2P59090 65 aa11.85□□□□□ -0.51
SNHG6-203ENST00000520944 SPAG11AQ6PDA7 123 aa11.85□□□□□ -0.51
SNHG6-203ENST00000520944 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
SNHG6-203ENST00000520944 DAND5Q8N907 189 aa11.84□□□□□ -0.51
SNHG6-203ENST00000520944 SMCR5Q8TEV8 140 aa11.84□□□□□ -0.51
SNHG6-203ENST00000520944 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
SNHG6-203ENST00000520944 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
SNHG6-203ENST00000520944 IGKCP01834 107 aa11.83□□□□□ -0.52
SNHG6-203ENST00000520944 NMUP48645 174 aa11.83□□□□□ -0.52
SNHG6-203ENST00000520944 MIEN1Q9BRT3 115 aa11.83□□□□□ -0.52
SNHG6-203ENST00000520944 IGLV7-46A0A075B6I9 117 aa11.82□□□□□ -0.52
SNHG6-203ENST00000520944 LOC107984156A0A0G2JMH3 177 aa11.82□□□□□ -0.52
SNHG6-203ENST00000520944 A0A0U1RQV1 116 aa11.82□□□□□ -0.52
SNHG6-203ENST00000520944 LGALS3P17931 250 aaKnown RBP11.82□□□□□ -0.52
SNHG6-203ENST00000520944 ARL17AQ8IVW1 177 aa11.82□□□□□ -0.52
SNHG6-203ENST00000520944 PMCHL2Q9BQD1 86 aa11.82□□□□□ -0.52
SNHG6-203ENST00000520944 KRTAP4-16G5E9R7 235 aaPredicted RBP11.81□□□□□ -0.52
SNHG6-203ENST00000520944 SLC7A5P1Q8MH63 180 aa11.81□□□□□ -0.52
SNHG6-203ENST00000520944 CDIP1Q9H305 208 aa11.81□□□□□ -0.52
SNHG6-203ENST00000520944 TRBV10-2A0A0K0K1G8 114 aa11.8□□□□□ -0.52
SNHG6-203ENST00000520944 DDTP30046 118 aa11.8□□□□□ -0.52
SNHG6-203ENST00000520944 PPDPFQ9H3Y8 114 aa11.8□□□□□ -0.52
SNHG6-203ENST00000520944 COLCA2A8K830 154 aa11.79□□□□□ -0.52
SNHG6-203ENST00000520944 TPRXLQ17RH7 258 aa11.78□□□□□ -0.52
SNHG6-203ENST00000520944 SPANXB1Q9NS25 103 aaPredicted RBP11.78□□□□□ -0.52
SNHG6-203ENST00000520944 B5MCH6 92 aa11.77□□□□□ -0.53
SNHG6-203ENST00000520944 S100A7L2Q5SY68 101 aa11.77□□□□□ -0.53
SNHG6-203ENST00000520944 Q8NBF4 154 aa11.76□□□□□ -0.53
SNHG6-203ENST00000520944 GAGE2AQ6NT46 116 aa11.75□□□□□ -0.53
SNHG6-203ENST00000520944 NDUFC2O95298 119 aa11.74□□□□□ -0.53
SNHG6-203ENST00000520944 LINC00483Q53H64 154 aa11.73□□□□□ -0.53
SNHG6-203ENST00000520944 E9PLD3 99 aa11.71□□□□□ -0.53
SNHG6-203ENST00000520944 SPINK1P00995 79 aa11.71□□□□□ -0.53
SNHG6-203ENST00000520944 Q6ZRX8 168 aa11.71□□□□□ -0.53
SNHG6-203ENST00000520944 FP248Q71RG6 208 aaPredicted RBP11.71□□□□□ -0.53
SNHG6-203ENST00000520944 A0A0J9YXY3 114 aa11.7□□□□□ -0.54
SNHG6-203ENST00000520944 ERC2-IT1O76042 136 aa11.7□□□□□ -0.54
SNHG6-203ENST00000520944 IGLV6-57P01721 117 aa11.7□□□□□ -0.54
SNHG6-203ENST00000520944 NPC2P61916 151 aa11.7□□□□□ -0.54
SNHG6-203ENST00000520944 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
SNHG6-203ENST00000520944 TRAV23DV6A0A075B6W5 121 aa11.69□□□□□ -0.54
SNHG6-203ENST00000520944 IGLV9-49A0A0B4J1Y8 123 aa11.69□□□□□ -0.54
SNHG6-203ENST00000520944 Q9BRP9 147 aa11.69□□□□□ -0.54
SNHG6-203ENST00000520944 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
SNHG6-203ENST00000520944 MUC17Q685J3 4493 aa11.68□□□□□ -0.54
SNHG6-203ENST00000520944 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
SNHG6-203ENST00000520944 MOBPQ13875 183 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms