RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 HIGD2BQ4VC39 106 aa17.2■□□□□ 0.34
COL13A1-213ENST00000520267 C9orf129Q5T035 196 aaKnown RBP17.2■□□□□ 0.34
COL13A1-213ENST00000520267 S100A7L2Q5SY68 101 aa17.17■□□□□ 0.34
COL13A1-213ENST00000520267 ACYP1P07311 99 aa17.17■□□□□ 0.34
COL13A1-213ENST00000520267 INAFM2P0DMQ5 153 aa17.17■□□□□ 0.34
COL13A1-213ENST00000520267 ZNF561-AS1K7EIQ3 104 aa17.16■□□□□ 0.34
COL13A1-213ENST00000520267 LINC01556Q5JQF7 62 aa17.15■□□□□ 0.34
COL13A1-213ENST00000520267 GAGE2BQ13066 116 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 GAGE2EQ4V326 116 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 C6orf99Q4VX62 202 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 GAGE2DQ9UEU5 116 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 Q8N814 137 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 C15orf56Q8N910 161 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 LINC00167Q96N53 147 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 CAMK2N2Q96S95 79 aa17.14■□□□□ 0.33
COL13A1-213ENST00000520267 XAGE1AQ9HD64 81 aa17.13■□□□□ 0.33
COL13A1-213ENST00000520267 ORMDL1Q9P0S3 153 aa17.13■□□□□ 0.33
COL13A1-213ENST00000520267 RPL18AQ02543 176 aaKnown RBP17.13■□□□□ 0.33
COL13A1-213ENST00000520267 A0A1B0GX51 115 aa17.12■□□□□ 0.33
COL13A1-213ENST00000520267 OBSCN-AS1Q96MR7 158 aa17.12■□□□□ 0.33
COL13A1-213ENST00000520267 ANAPC13Q9BS18 74 aa17.12■□□□□ 0.33
COL13A1-213ENST00000520267 NOTCH1P46531 2555 aa17.11■□□□□ 0.33
COL13A1-213ENST00000520267 SMCR5Q8TEV8 140 aa17.1■□□□□ 0.33
COL13A1-213ENST00000520267 C1orf43Q9BWL3 253 aa17.1■□□□□ 0.33
COL13A1-213ENST00000520267 GAGE2AQ6NT46 116 aa17.1■□□□□ 0.33
COL13A1-213ENST00000520267 C14orf132Q9NPU4 83 aa17.1■□□□□ 0.33
COL13A1-213ENST00000520267 IGLV6-57P01721 117 aa17.09■□□□□ 0.33
COL13A1-213ENST00000520267 Q6Q795 121 aa17.09■□□□□ 0.33
COL13A1-213ENST00000520267 Q6ZRU5 148 aa17.09■□□□□ 0.33
COL13A1-213ENST00000520267 COL6A5A8TX70 2615 aa17.08■□□□□ 0.32
COL13A1-213ENST00000520267 IGKV2D-24A0A075B6R9 120 aa17.08■□□□□ 0.32
COL13A1-213ENST00000520267 K7EIL1 84 aa17.07■□□□□ 0.32
COL13A1-213ENST00000520267 MRAPQ8TCY5 172 aa17.07■□□□□ 0.32
COL13A1-213ENST00000520267 TM2D3Q9BRN9 247 aa17.07■□□□□ 0.32
COL13A1-213ENST00000520267 TRAV10A0A0B4J240 114 aa17.05■□□□□ 0.32
COL13A1-213ENST00000520267 NHLRC4P0CG21 123 aaPredicted RBP17.04■□□□□ 0.32
COL13A1-213ENST00000520267 DNAH10OSP0CZ25 163 aa17.04■□□□□ 0.32
COL13A1-213ENST00000520267 C2orf48Q96LS8 159 aa17.04■□□□□ 0.32
COL13A1-213ENST00000520267 LINC00575Q6W349 94 aa17.04■□□□□ 0.32
COL13A1-213ENST00000520267 SDIM1Q6ZPB5 146 aa17.04■□□□□ 0.32
COL13A1-213ENST00000520267 SS18L2Q9UHA2 77 aa17.03■□□□□ 0.32
COL13A1-213ENST00000520267 TRBV10-3A0A0K0K1G6 114 aa17.03■□□□□ 0.32
COL13A1-213ENST00000520267 HUWE1Q7Z6Z7 4374 aaKnown RBP17.01■□□□□ 0.31
COL13A1-213ENST00000520267 LINC00588Q9Y4M8 146 aa17■□□□□ 0.31
COL13A1-213ENST00000520267 TRBV7-7A0A0K0K1E9 115 aa16.99■□□□□ 0.31
COL13A1-213ENST00000520267 TMEM256-PLSCR3K7ERE1 68 aa16.99■□□□□ 0.31
COL13A1-213ENST00000520267 VPREB1P12018 145 aa16.99■□□□□ 0.31
COL13A1-213ENST00000520267 LINC00643Q86TS7 51 aa16.99■□□□□ 0.31
COL13A1-213ENST00000520267 NDUFC2-KCTD14E9PQ53 114 aa16.98■□□□□ 0.31
COL13A1-213ENST00000520267 NDUFV3P56181 108 aaKnown RBP16.98■□□□□ 0.31
COL13A1-213ENST00000520267 TRAV23DV6A0A075B6W5 121 aa16.97■□□□□ 0.31
COL13A1-213ENST00000520267 hADV29S1A0JD25 119 aa16.97■□□□□ 0.31
COL13A1-213ENST00000520267 NBEAL1Q6ZS30 2694 aa16.96■□□□□ 0.31
COL13A1-213ENST00000520267 B5MCH6 92 aa16.96■□□□□ 0.31
COL13A1-213ENST00000520267 Q6ZRP5 223 aa16.94■□□□□ 0.3
COL13A1-213ENST00000520267 SYCNQ0VAF6 134 aa16.93■□□□□ 0.3
COL13A1-213ENST00000520267 JMJD7-PLA2G4BH0Y9G9 81 aa16.92■□□□□ 0.3
COL13A1-213ENST00000520267 DIRC1Q969H9 104 aa16.92■□□□□ 0.3
COL13A1-213ENST00000520267 F8WDY8 70 aa16.91■□□□□ 0.3
COL13A1-213ENST00000520267 ZNF73O43830 326 aaPredicted RBP16.9■□□□□ 0.3
COL13A1-213ENST00000520267 M0R378 163 aa16.9■□□□□ 0.3
COL13A1-213ENST00000520267 LINC00846Q9NV44 126 aa16.9■□□□□ 0.3
COL13A1-213ENST00000520267 CCKP06307 115 aa16.88■□□□□ 0.29
COL13A1-213ENST00000520267 IMUPQ9GZP8 106 aa16.88■□□□□ 0.29
COL13A1-213ENST00000520267 CASC10Q5T4H9 136 aa16.87■□□□□ 0.29
COL13A1-213ENST00000520267 Q6ZQY7 126 aa16.86■□□□□ 0.29
COL13A1-213ENST00000520267 CCDC179H3BU77 68 aa16.85■□□□□ 0.29
COL13A1-213ENST00000520267 COX7BP24311 80 aa16.85■□□□□ 0.29
COL13A1-213ENST00000520267 DNAH1Q9P2D7 4330 aa16.85■□□□□ 0.29
COL13A1-213ENST00000520267 ELOF1P60002 83 aaKnown RBP16.83■□□□□ 0.28
COL13A1-213ENST00000520267 USP17L23D6RBM5 183 aa16.82■□□□□ 0.28
COL13A1-213ENST00000520267 TRBV7-6A0A0J9YX20 115 aa16.8■□□□□ 0.28
COL13A1-213ENST00000520267 UPK3BQ9BT76 320 aa16.79■□□□□ 0.28
COL13A1-213ENST00000520267 LAMTOR3Q9UHA4 124 aa16.79■□□□□ 0.28
COL13A1-213ENST00000520267 FAM236AA0A1B0GUQ0 79 aa16.78■□□□□ 0.28
COL13A1-213ENST00000520267 FAM236BA0A1B0GV22 79 aa16.78■□□□□ 0.28
COL13A1-213ENST00000520267 SERTAD4-AS1Q5TG53 156 aa16.77■□□□□ 0.28
COL13A1-213ENST00000520267 RBM3P98179 157 aaKnown RBP16.76■□□□□ 0.27
COL13A1-213ENST00000520267 MGAM2Q2M2H8 2515 aa16.76■□□□□ 0.27
COL13A1-213ENST00000520267 TLX1NBP0CAT3 122 aa16.76■□□□□ 0.27
COL13A1-213ENST00000520267 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.75■□□□□ 0.27
COL13A1-213ENST00000520267 IGKV3D-7A0A0C4DH55 119 aa16.75■□□□□ 0.27
COL13A1-213ENST00000520267 Q6JHZ5 121 aa16.75■□□□□ 0.27
COL13A1-213ENST00000520267 RMI2Q96E14 147 aa16.75■□□□□ 0.27
COL13A1-213ENST00000520267 LINC00528Q8N1L1 170 aa16.73■□□□□ 0.27
COL13A1-213ENST00000520267 Q6ZQT0 140 aa16.72■□□□□ 0.27
COL13A1-213ENST00000520267 NKAPP1Q8N9T2 125 aa16.72■□□□□ 0.27
COL13A1-213ENST00000520267 H3BQ85 93 aa16.72■□□□□ 0.27
COL13A1-213ENST00000520267 C7orf33Q8WU49 177 aa16.71■□□□□ 0.27
COL13A1-213ENST00000520267 LOC110117498A0A087WWA1 95 aa16.7■□□□□ 0.26
COL13A1-213ENST00000520267 SMIM20Q8N5G0 67 aa16.7■□□□□ 0.26
COL13A1-213ENST00000520267 MDFIQ99750 246 aa16.7■□□□□ 0.26
COL13A1-213ENST00000520267 KCNQ1DNQ9H478 68 aa16.68■□□□□ 0.26
COL13A1-213ENST00000520267 FAM168BA1KXE4 195 aa16.67■□□□□ 0.26
COL13A1-213ENST00000520267 DNAH9Q9NYC9 4486 aa16.67■□□□□ 0.26
COL13A1-213ENST00000520267 PLA2G2DQ9UNK4 145 aa16.67■□□□□ 0.26
COL13A1-213ENST00000520267 M0R2N4 97 aa16.66■□□□□ 0.26
COL13A1-213ENST00000520267 COL7A1Q02388 2944 aa16.66■□□□□ 0.26
COL13A1-213ENST00000520267 DSCR8Q96T75 97 aa16.65■□□□□ 0.26
COL13A1-213ENST00000520267 KRTAP1-5Q9BYS1 174 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms