RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 FAM74A3Q4VXF1 159 aa3.5□□□□□ -1.85
CTNNA1-214ENST00000519116 PDZD11Q5EBL8 140 aa3.5□□□□□ -1.85
CTNNA1-214ENST00000519116 PAPPA-AS1Q5QFB9 102 aa3.5□□□□□ -1.85
CTNNA1-214ENST00000519116 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
CTNNA1-214ENST00000519116 ORMDL3Q8N138 153 aa3.5□□□□□ -1.85
CTNNA1-214ENST00000519116 SMIM7Q9BQ49 75 aa3.5□□□□□ -1.85
CTNNA1-214ENST00000519116 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
CTNNA1-214ENST00000519116 USH2AO75445 5202 aa3.49□□□□□ -1.85
CTNNA1-214ENST00000519116 SMIM1B2RUZ4 78 aa3.49□□□□□ -1.85
CTNNA1-214ENST00000519116 ATP5LO75964 103 aa3.49□□□□□ -1.85
CTNNA1-214ENST00000519116 CFC1P0CG37 223 aa3.49□□□□□ -1.85
CTNNA1-214ENST00000519116 LINC00483Q53H64 154 aa3.49□□□□□ -1.85
CTNNA1-214ENST00000519116 SMIM27A0A1W2PRY6 76 aa3.48□□□□□ -1.85
CTNNA1-214ENST00000519116 IGIPA6NJ69 53 aa3.48□□□□□ -1.85
CTNNA1-214ENST00000519116 MOBPQ13875 183 aa3.48□□□□□ -1.85
CTNNA1-214ENST00000519116 TMEM136Q6ZRR5 245 aa3.48□□□□□ -1.85
CTNNA1-214ENST00000519116 AKAP14Q86UN6 197 aa3.48□□□□□ -1.85
CTNNA1-214ENST00000519116 PRELID3AQ96N28 172 aa3.48□□□□□ -1.85
CTNNA1-214ENST00000519116 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
CTNNA1-214ENST00000519116 IGLV9-49A0A0B4J1Y8 123 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 LOC389332A0A1B0GUA5 103 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 PRSS47A8MTI9 375 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 PFN2P35080 140 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 RAB14P61106 215 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 ORMDL2Q53FV1 153 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 SMCR5Q8TEV8 140 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 MAP1LC3AQ9H492 121 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 SND1-IT1Q9HBX3 110 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 LAMTOR2Q9Y2Q5 125 aa3.47□□□□□ -1.85
CTNNA1-214ENST00000519116 IGLV5-45A0A087WSX0 123 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 TINCRA0A1B0GVN0 87 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 A0A1B0GXF2 115 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 KRTAP4-16G5E9R7 235 aaPredicted RBP3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 K7EMI3 77 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 G0S2P27469 103 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 GAGE2AQ6NT46 116 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 MRPL54Q6P161 138 aaKnown RBP3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 SLC51BQ86UW2 128 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 Q8N8P6 123 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 TIMM17AQ99595 171 aa3.46□□□□□ -1.86
CTNNA1-214ENST00000519116 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
CTNNA1-214ENST00000519116 PRYO14603 147 aa3.45□□□□□ -1.86
CTNNA1-214ENST00000519116 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
CTNNA1-214ENST00000519116 BLOC1S1P78537 153 aa3.45□□□□□ -1.86
CTNNA1-214ENST00000519116 COX17Q14061 63 aa3.45□□□□□ -1.86
CTNNA1-214ENST00000519116 ERG28Q9UKR5 140 aa3.45□□□□□ -1.86
CTNNA1-214ENST00000519116 ETDCA0A1B0GVM5 59 aa3.44□□□□□ -1.86
CTNNA1-214ENST00000519116 H3BRM9 83 aa3.44□□□□□ -1.86
CTNNA1-214ENST00000519116 RPL23P62829 140 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-214ENST00000519116 ADIRFQ15847 76 aa3.44□□□□□ -1.86
CTNNA1-214ENST00000519116 RGS21Q2M5E4 152 aa3.44□□□□□ -1.86
CTNNA1-214ENST00000519116 Q8NDZ9 215 aa3.44□□□□□ -1.86
CTNNA1-214ENST00000519116 SRP19P09132 144 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 SPRR1AP35321 89 aa3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 ERASQ7Z444 233 aa3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 ATP5L2Q7Z4Y8 100 aa3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 TOMM6Q96B49 74 aa3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 LIMD2Q9BT23 127 aa3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 NXT2Q9NPJ8 142 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 BATF3Q9NR55 127 aa3.43□□□□□ -1.86
CTNNA1-214ENST00000519116 IGLV6-57P01721 117 aa3.42□□□□□ -1.86
CTNNA1-214ENST00000519116 C9orf153Q5TBE3 101 aa3.42□□□□□ -1.86
CTNNA1-214ENST00000519116 SCGB3A1Q96QR1 104 aa3.42□□□□□ -1.86
CTNNA1-214ENST00000519116 KCNQ1DNQ9H478 68 aa3.42□□□□□ -1.86
CTNNA1-214ENST00000519116 CST9LQ9H4G1 147 aa3.42□□□□□ -1.86
CTNNA1-214ENST00000519116 NAT8Q9UHE5 227 aa3.42□□□□□ -1.86
CTNNA1-214ENST00000519116 IGLV5-39A0A0G2JS06 123 aa3.41□□□□□ -1.86
CTNNA1-214ENST00000519116 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
CTNNA1-214ENST00000519116 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
CTNNA1-214ENST00000519116 SFTA2Q6UW10 78 aa3.41□□□□□ -1.86
CTNNA1-214ENST00000519116 TRAV9-1A0A075B6T8 112 aa3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 LINC01549A6NIU2 74 aa3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 ERC2-IT1O76042 136 aa3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 S100A12P80511 92 aa3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 Q6Q795 121 aa3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 ALKAL2Q6UX46 152 aa3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 ZNF625Q96I27 306 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 LINC00846Q9NV44 126 aa3.4□□□□□ -1.87
CTNNA1-214ENST00000519116 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-214ENST00000519116 B5MCH6 92 aa3.39□□□□□ -1.87
CTNNA1-214ENST00000519116 ADCYAP1P18509 176 aa3.39□□□□□ -1.87
CTNNA1-214ENST00000519116 LINC00158P58513 81 aa3.39□□□□□ -1.87
CTNNA1-214ENST00000519116 PMVKQ15126 192 aa3.39□□□□□ -1.87
CTNNA1-214ENST00000519116 NCR3O14931 201 aa3.38□□□□□ -1.87
CTNNA1-214ENST00000519116 BOD1L2Q8IYS8 172 aa3.38□□□□□ -1.87
CTNNA1-214ENST00000519116 TMA7Q9Y2S6 64 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-214ENST00000519116 TRBV10-3A0A0K0K1G6 114 aa3.37□□□□□ -1.87
CTNNA1-214ENST00000519116 IGLC3P0DOY3 106 aa3.37□□□□□ -1.87
CTNNA1-214ENST00000519116 TCTE3Q8IZS6 198 aa3.37□□□□□ -1.87
CTNNA1-214ENST00000519116 Q9BRP9 147 aa3.37□□□□□ -1.87
CTNNA1-214ENST00000519116 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-214ENST00000519116 ATP6V1G1O75348 118 aa3.36□□□□□ -1.87
CTNNA1-214ENST00000519116 ZNF22P17026 224 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-214ENST00000519116 HRCT1Q6UXD1 115 aa3.36□□□□□ -1.87
CTNNA1-214ENST00000519116 Q6ZRX8 168 aa3.36□□□□□ -1.87
CTNNA1-214ENST00000519116 A0A0U1RRA0 63 aa3.35□□□□□ -1.87
CTNNA1-214ENST00000519116 C5orf52A6NGY3 159 aa3.35□□□□□ -1.87
CTNNA1-214ENST00000519116 C9JQL5 133 aa3.35□□□□□ -1.87
CTNNA1-214ENST00000519116 JOSD1Q15040 202 aaPredicted RBP3.35□□□□□ -1.87
CTNNA1-214ENST00000519116 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms