RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 PYY3Q5JQD4 70 aa8.25□□□□□ -1.09
PABPC1-205ENST00000518196 VAMP8Q9BV40 100 aa8.25□□□□□ -1.09
PABPC1-205ENST00000518196 EPPK1P58107 5090 aaKnown RBP8.25□□□□□ -1.09
PABPC1-205ENST00000518196 A0A087WYN8 130 aa8.24□□□□□ -1.09
PABPC1-205ENST00000518196 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
PABPC1-205ENST00000518196 SVIPQ8NHG7 77 aa8.24□□□□□ -1.09
PABPC1-205ENST00000518196 TTTY13Q9BZ97 58 aa8.24□□□□□ -1.09
PABPC1-205ENST00000518196 XAGE1AQ9HD64 81 aa8.24□□□□□ -1.09
PABPC1-205ENST00000518196 XGP55808 180 aa8.23□□□□□ -1.09
PABPC1-205ENST00000518196 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
PABPC1-205ENST00000518196 CIRBP-AS1Q8TBR5 109 aa8.23□□□□□ -1.09
PABPC1-205ENST00000518196 LRP1BQ9NZR2 4599 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 SPATA45Q537H7 98 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 C9orf129Q5T035 196 aaKnown RBP8.22□□□□□ -1.09
PABPC1-205ENST00000518196 LCE3BQ5TA77 95 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 SCGB1D4Q6XE38 83 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 PCP2Q8IVA1 136 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 PAM16Q9Y3D7 125 aa8.22□□□□□ -1.09
PABPC1-205ENST00000518196 TIMM17BO60830 172 aa8.21□□□□□ -1.1
PABPC1-205ENST00000518196 HAMPP81172 84 aa8.21□□□□□ -1.1
PABPC1-205ENST00000518196 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.1
PABPC1-205ENST00000518196 A0A1W2PNN7 141 aa8.2□□□□□ -1.1
PABPC1-205ENST00000518196 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
PABPC1-205ENST00000518196 COX8AP10176 69 aa8.19□□□□□ -1.1
PABPC1-205ENST00000518196 S100A12P80511 92 aa8.19□□□□□ -1.1
PABPC1-205ENST00000518196 FAM19A5Q7Z5A7 132 aaPredicted RBP8.19□□□□□ -1.1
PABPC1-205ENST00000518196 BIRC6Q9NR09 4857 aa8.19□□□□□ -1.1
PABPC1-205ENST00000518196 DNAH8Q96JB1 4490 aa8.18□□□□□ -1.1
PABPC1-205ENST00000518196 EPM2AB3EWF7 344 aa8.18□□□□□ -1.1
PABPC1-205ENST00000518196 TMEM238C9JI98 176 aa8.18□□□□□ -1.1
PABPC1-205ENST00000518196 RPL24P83731 157 aaKnown RBP8.18□□□□□ -1.1
PABPC1-205ENST00000518196 DAND5Q8N907 189 aa8.18□□□□□ -1.1
PABPC1-205ENST00000518196 LOC105371267A0A1B0GV96 52 aa8.17□□□□□ -1.1
PABPC1-205ENST00000518196 ADAMTSL4-AS1Q5T5F5 129 aa8.17□□□□□ -1.1
PABPC1-205ENST00000518196 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
PABPC1-205ENST00000518196 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
PABPC1-205ENST00000518196 M0QXV9 152 aa8.16□□□□□ -1.1
PABPC1-205ENST00000518196 DLEU1O43261 78 aa8.16□□□□□ -1.1
PABPC1-205ENST00000518196 SERTAD4-AS1Q5TG53 156 aa8.16□□□□□ -1.1
PABPC1-205ENST00000518196 NKAPP1Q8N9T2 125 aa8.16□□□□□ -1.1
PABPC1-205ENST00000518196 C7orf33Q8WU49 177 aa8.16□□□□□ -1.1
PABPC1-205ENST00000518196 C14orf144Q96I85 54 aa8.16□□□□□ -1.1
PABPC1-205ENST00000518196 LITAFQ99732 161 aa8.16□□□□□ -1.1
PABPC1-205ENST00000518196 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-205ENST00000518196 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-205ENST00000518196 SLC25A34Q6PIV7 304 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 Q6ZVH6 145 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 COPS9Q8WXC6 57 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 SPANXDQ9BXN6 97 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 SPANXCQ9NY87 97 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 TP73-AS1Q9UF72 201 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
PABPC1-205ENST00000518196 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
PABPC1-205ENST00000518196 SMIM6P0DI80 62 aa8.14□□□□□ -1.11
PABPC1-205ENST00000518196 NPC2P61916 151 aa8.14□□□□□ -1.11
PABPC1-205ENST00000518196 LCE4AQ5TA78 99 aa8.14□□□□□ -1.11
PABPC1-205ENST00000518196 PHF5AQ7RTV0 110 aaKnown RBP8.14□□□□□ -1.11
PABPC1-205ENST00000518196 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
PABPC1-205ENST00000518196 VPREB1P12018 145 aa8.13□□□□□ -1.11
PABPC1-205ENST00000518196 IFITM1P13164 125 aa8.13□□□□□ -1.11
PABPC1-205ENST00000518196 SRSF9Q13242 221 aaKnown RBP eCLIP8.13□□□□□ -1.11
PABPC1-205ENST00000518196 LINC00308Q8TCZ7 52 aa8.13□□□□□ -1.11
PABPC1-205ENST00000518196 APOBP04114 4563 aaKnown RBP8.12□□□□□ -1.11
PABPC1-205ENST00000518196 UBE2BP63146 152 aa8.12□□□□□ -1.11
PABPC1-205ENST00000518196 MRPL55Q7Z7F7 128 aaKnown RBP8.12□□□□□ -1.11
PABPC1-205ENST00000518196 SPANXB1Q9NS25 103 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-205ENST00000518196 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
PABPC1-205ENST00000518196 RYR1P21817 5038 aa8.11□□□□□ -1.11
PABPC1-205ENST00000518196 M0R378 163 aa8.1□□□□□ -1.11
PABPC1-205ENST00000518196 NDUFC2O95298 119 aa8.1□□□□□ -1.11
PABPC1-205ENST00000518196 Q8N1X5 172 aa8.1□□□□□ -1.11
PABPC1-205ENST00000518196 LINC00167Q96N53 147 aa8.1□□□□□ -1.11
PABPC1-205ENST00000518196 PPDPFQ9H3Y8 114 aa8.1□□□□□ -1.11
PABPC1-205ENST00000518196 NCR3O14931 201 aa8.09□□□□□ -1.11
PABPC1-205ENST00000518196 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.11
PABPC1-205ENST00000518196 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
PABPC1-205ENST00000518196 Q8NDZ9 215 aa8.09□□□□□ -1.11
PABPC1-205ENST00000518196 HIST1H4GQ99525 98 aa8.09□□□□□ -1.11
PABPC1-205ENST00000518196 HIGD1BQ9P298 99 aa8.09□□□□□ -1.11
PABPC1-205ENST00000518196 TRBV10-2A0A0K0K1G8 114 aa8.08□□□□□ -1.12
PABPC1-205ENST00000518196 GAGE10A6NGK3 116 aa8.08□□□□□ -1.12
PABPC1-205ENST00000518196 UQCR10Q9UDW1 63 aa8.08□□□□□ -1.12
PABPC1-205ENST00000518196 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
PABPC1-205ENST00000518196 KRTAP9-7A8MTY7 169 aa8.07□□□□□ -1.12
PABPC1-205ENST00000518196 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
PABPC1-205ENST00000518196 Q5VSD8 79 aa8.07□□□□□ -1.12
PABPC1-205ENST00000518196 LINC00518Q8N0U6 118 aa8.07□□□□□ -1.12
PABPC1-205ENST00000518196 TRIAP1O43715 76 aa8.06□□□□□ -1.12
PABPC1-205ENST00000518196 C2orf91Q6ZV80 131 aa8.06□□□□□ -1.12
PABPC1-205ENST00000518196 IGLV1-50A0A075B6I6 118 aa8.05□□□□□ -1.12
PABPC1-205ENST00000518196 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
PABPC1-205ENST00000518196 C12orf57Q99622 126 aa8.05□□□□□ -1.12
PABPC1-205ENST00000518196 PSORS1C2Q9UIG4 136 aa8.05□□□□□ -1.12
PABPC1-205ENST00000518196 KIAA1109Q2LD37 5005 aa8.05□□□□□ -1.12
PABPC1-205ENST00000518196 HSPG2P98160 4391 aa8.04□□□□□ -1.12
PABPC1-205ENST00000518196 IGKV2-28A0A075B6P5 120 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms