RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 TTC37Q6PGP7 1564 aa-0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 ALMS1Q8TCU4 4167 aa-0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 LRRC37AA6NMS7 1700 aa-0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 PVALEFA0A1B0GWK0 134 aa-0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 HMGN2P05204 90 aaKnown RBP-0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 IGLC2P0DOY2 106 aa-0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 DEFB105AQ8NG35 78 aa-0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 CSPG4Q6UVK1 2322 aa-0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 PLIN4Q96Q06 1357 aa-0.04□□□□□ -2.42
RNU6-840P-201ENST00000517275 CLTCQ00610 1675 aaKnown RBP-0.04□□□□□ -2.42
RNU6-840P-201ENST00000517275 CPSF4LA6NMK7 179 aaKnown RBP-0.04□□□□□ -2.42
RNU6-840P-201ENST00000517275 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-840P-201ENST00000517275 FLNCQ14315 2725 aa-0.04□□□□□ -2.42
RNU6-840P-201ENST00000517275 AKAP12Q02952 1782 aa-0.04□□□□□ -2.42
RNU6-840P-201ENST00000517275 HSPG2P98160 4391 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 SPTA1P02549 2419 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 TSC2P49815 1807 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 NMSQ5H8A3 153 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 SPRR2GQ9BYE4 73 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 Q9H521 79 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 KIAA1551Q9HCM1 1747 aa-0.05□□□□□ -2.42
RNU6-840P-201ENST00000517275 I3L3M4 83 aa-0.06□□□□□ -2.42
RNU6-840P-201ENST00000517275 LRP2P98164 4655 aa-0.07□□□□□ -2.42
RNU6-840P-201ENST00000517275 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
RNU6-840P-201ENST00000517275 K7EP34 96 aa-0.07□□□□□ -2.42
RNU6-840P-201ENST00000517275 PEA15Q15121 130 aa-0.07□□□□□ -2.42
RNU6-840P-201ENST00000517275 RABAC1Q9UI14 185 aa-0.07□□□□□ -2.42
RNU6-840P-201ENST00000517275 MRPL34Q9BQ48 92 aaKnown RBP-0.08□□□□□ -2.42
RNU6-840P-201ENST00000517275 ABCC3O15438 1527 aa-0.08□□□□□ -2.42
RNU6-840P-201ENST00000517275 NEXMIFQ5QGS0 1516 aa-0.08□□□□□ -2.42
RNU6-840P-201ENST00000517275 EP300Q09472 2414 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-840P-201ENST00000517275 FMN2Q9NZ56 1722 aa-0.09□□□□□ -2.42
RNU6-840P-201ENST00000517275 KLK9Q2XQG4 91 aa-0.09□□□□□ -2.42
RNU6-840P-201ENST00000517275 APLNQ9ULZ1 77 aa-0.09□□□□□ -2.42
RNU6-840P-201ENST00000517275 C5P01031 1676 aa-0.09□□□□□ -2.42
RNU6-840P-201ENST00000517275 FLNAP21333 2647 aaKnown RBP-0.09□□□□□ -2.42
RNU6-840P-201ENST00000517275 MON2Q7Z3U7 1717 aa-0.1□□□□□ -2.42
RNU6-840P-201ENST00000517275 CLIP1P30622 1438 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 ANKRD36A6QL64 1941 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 MYH4Q9Y623 1939 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 CCL22O00626 93 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 SNRPFP62306 86 aaKnown RBP-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 C9orf62Q8N4C0 152 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 S100A16Q96FQ6 103 aaKnown RBP-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 SETXQ7Z333 2677 aaKnown RBP-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 CRYBG1Q9Y4K1 1723 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 ATP7BP35670 1465 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 MAGI2Q86UL8 1455 aa-0.1□□□□□ -2.43
RNU6-840P-201ENST00000517275 SPTY2D1-AS1A0A0U1RR47 76 aa-0.11□□□□□ -2.43
RNU6-840P-201ENST00000517275 GNG2P59768 71 aa-0.11□□□□□ -2.43
RNU6-840P-201ENST00000517275 PLGLAQ15195 96 aa-0.11□□□□□ -2.43
RNU6-840P-201ENST00000517275 REV3LO60673 3130 aa-0.11□□□□□ -2.43
RNU6-840P-201ENST00000517275 MACF1Q9UPN3 7388 aaKnown RBP-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 MYO3AQ8NEV4 1616 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 A0A1B0GUT8 65 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 IQCF6A8MYZ5 107 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 SPRR2BP35325 72 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 DEFB112Q30KQ8 113 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 H1FX-AS1Q4G0G2 97 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 LINC00643Q86TS7 51 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 WNK1Q9H4A3 2382 aa-0.12□□□□□ -2.43
RNU6-840P-201ENST00000517275 MYMXA0A1B0GTQ4 84 aa-0.13□□□□□ -2.43
RNU6-840P-201ENST00000517275 ALKQ9UM73 1620 aa-0.13□□□□□ -2.43
RNU6-840P-201ENST00000517275 HECTD4Q9Y4D8 3996 aa-0.14□□□□□ -2.43
RNU6-840P-201ENST00000517275 LRRC9Q6ZRR7 1453 aa-0.14□□□□□ -2.43
RNU6-840P-201ENST00000517275 MAP1BP46821 2468 aaKnown RBP-0.14□□□□□ -2.43
RNU6-840P-201ENST00000517275 CYB5AP00167 134 aa-0.14□□□□□ -2.43
RNU6-840P-201ENST00000517275 ACYP1P07311 99 aa-0.14□□□□□ -2.43
RNU6-840P-201ENST00000517275 COX7BP24311 80 aa-0.14□□□□□ -2.43
RNU6-840P-201ENST00000517275 FXYD6Q9H0Q3 95 aa-0.14□□□□□ -2.43
RNU6-840P-201ENST00000517275 M0R2T5 61 aa-0.15□□□□□ -2.43
RNU6-840P-201ENST00000517275 TDRG1Q3Y452 100 aa-0.15□□□□□ -2.43
RNU6-840P-201ENST00000517275 COX6B2Q6YFQ2 88 aa-0.15□□□□□ -2.43
RNU6-840P-201ENST00000517275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.16□□□□□ -2.43
RNU6-840P-201ENST00000517275 CDKN2A-AS1Q9UH64 79 aa-0.16□□□□□ -2.44
RNU6-840P-201ENST00000517275 TENM2Q9NT68 2774 aa-0.16□□□□□ -2.44
RNU6-840P-201ENST00000517275 UBR1Q8IWV7 1749 aa-0.16□□□□□ -2.44
RNU6-840P-201ENST00000517275 APC2O95996 2303 aa-0.16□□□□□ -2.44
RNU6-840P-201ENST00000517275 COL6A3P12111 3177 aa-0.17□□□□□ -2.44
RNU6-840P-201ENST00000517275 SMARCA2P51531 1590 aa-0.17□□□□□ -2.44
RNU6-840P-201ENST00000517275 UACAQ9BZF9 1416 aa-0.18□□□□□ -2.44
RNU6-840P-201ENST00000517275 RGPD4Q7Z3J3 1758 aa-0.18□□□□□ -2.44
RNU6-840P-201ENST00000517275 LOC730098B7Z3J9 87 aa-0.18□□□□□ -2.44
RNU6-840P-201ENST00000517275 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
RNU6-840P-201ENST00000517275 CEBPZOSA8MTT3 80 aa-0.19□□□□□ -2.44
RNU6-840P-201ENST00000517275 GAFA1Q96PS6 74 aa-0.19□□□□□ -2.44
RNU6-840P-201ENST00000517275 MED14O60244 1454 aa-0.19□□□□□ -2.44
RNU6-840P-201ENST00000517275 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
RNU6-840P-201ENST00000517275 KIF20BQ96Q89 1820 aa-0.2□□□□□ -2.44
RNU6-840P-201ENST00000517275 QSER1Q2KHR3 1735 aa-0.2□□□□□ -2.44
RNU6-840P-201ENST00000517275 TRAV21A0A0B4J279 112 aa-0.2□□□□□ -2.44
RNU6-840P-201ENST00000517275 LELP1Q5T871 98 aa-0.2□□□□□ -2.44
RNU6-840P-201ENST00000517275 PKD1L3Q7Z443 1732 aa-0.21□□□□□ -2.44
RNU6-840P-201ENST00000517275 FLNBO75369 2602 aaKnown RBP-0.21□□□□□ -2.44
RNU6-840P-201ENST00000517275 KANTRA0A1W2PQU2 76 aa-0.21□□□□□ -2.44
RNU6-840P-201ENST00000517275 STAB1Q9NY15 2570 aa-0.21□□□□□ -2.44
RNU6-840P-201ENST00000517275 RGPD3A6NKT7 1758 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-840P-201ENST00000517275 PPLO60437 1756 aa-0.22□□□□□ -2.44
RNU6-840P-201ENST00000517275 LRRC7Q96NW7 1537 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms