RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FAM104AQ969W3 186 aa5.22□□□□□ -1.57
PDLIM5-219ENST00000514743 SETXQ7Z333 2677 aaKnown RBP5.22□□□□□ -1.57
PDLIM5-219ENST00000514743 A0A0J9YXV3 536 aa5.22□□□□□ -1.57
PDLIM5-219ENST00000514743 DNAJC9-AS1A6NH13 148 aa5.22□□□□□ -1.57
PDLIM5-219ENST00000514743 KRTAP1-1Q07627 177 aa5.22□□□□□ -1.57
PDLIM5-219ENST00000514743 DEFB114Q30KQ6 69 aa5.22□□□□□ -1.57
PDLIM5-219ENST00000514743 NREPQ16612 68 aa5.21□□□□□ -1.57
PDLIM5-219ENST00000514743 C11orf72Q8NBR9 251 aa5.21□□□□□ -1.57
PDLIM5-219ENST00000514743 LINC00337Q8N6G1 96 aa5.21□□□□□ -1.58
PDLIM5-219ENST00000514743 C20orf203Q8NBC4 194 aa5.21□□□□□ -1.58
PDLIM5-219ENST00000514743 CCDC168Q8NDH2 2452 aa5.21□□□□□ -1.58
PDLIM5-219ENST00000514743 CXCL6P80162 114 aa5.21□□□□□ -1.58
PDLIM5-219ENST00000514743 Q5VV11 94 aa5.21□□□□□ -1.58
PDLIM5-219ENST00000514743 Q6ZSN1 163 aa5.21□□□□□ -1.58
PDLIM5-219ENST00000514743 KMT2BQ9UMN6 2715 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-219ENST00000514743 FASNP49327 2511 aaKnown RBP5.2□□□□□ -1.58
PDLIM5-219ENST00000514743 ODF3L2Q3SX64 289 aa5.2□□□□□ -1.58
PDLIM5-219ENST00000514743 LINC00467Q9BRT7 94 aa5.2□□□□□ -1.58
PDLIM5-219ENST00000514743 IGHV3-38A0A0C4DH36 116 aa5.2□□□□□ -1.58
PDLIM5-219ENST00000514743 IGHV3-30-3P0DP02 117 aa5.2□□□□□ -1.58
PDLIM5-219ENST00000514743 OBSCN-AS1Q96MR7 158 aa5.19□□□□□ -1.58
PDLIM5-219ENST00000514743 IGLV4-3A0A075B6K6 122 aa5.19□□□□□ -1.58
PDLIM5-219ENST00000514743 JMJD1CQ15652 2540 aa5.19□□□□□ -1.58
PDLIM5-219ENST00000514743 ITPR2Q14571 2701 aa5.19□□□□□ -1.58
PDLIM5-219ENST00000514743 C1orf64Q8NEQ6 169 aa5.19□□□□□ -1.58
PDLIM5-219ENST00000514743 GYPEP15421 78 aa5.18□□□□□ -1.58
PDLIM5-219ENST00000514743 HAMPP81172 84 aa5.18□□□□□ -1.58
PDLIM5-219ENST00000514743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.18□□□□□ -1.58
PDLIM5-219ENST00000514743 IGHV3OR16-12A0A075B7B8 117 aa5.18□□□□□ -1.58
PDLIM5-219ENST00000514743 IGKV2-29A2NJV5 120 aaPredicted RBP5.18□□□□□ -1.58
PDLIM5-219ENST00000514743 MIR7-3HGQ8N6C7 128 aa5.18□□□□□ -1.58
PDLIM5-219ENST00000514743 CHCHD7Q9BUK0 85 aa5.18□□□□□ -1.58
PDLIM5-219ENST00000514743 A6NED7 52 aa5.17□□□□□ -1.58
PDLIM5-219ENST00000514743 H0Y9J4 135 aa5.17□□□□□ -1.58
PDLIM5-219ENST00000514743 Q8N3U1 123 aa5.17□□□□□ -1.58
PDLIM5-219ENST00000514743 INSP01308 110 aa5.17□□□□□ -1.58
PDLIM5-219ENST00000514743 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
PDLIM5-219ENST00000514743 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
PDLIM5-219ENST00000514743 IGHV3-53P01767 116 aa5.16□□□□□ -1.58
PDLIM5-219ENST00000514743 C6orf99Q4VX62 202 aa5.16□□□□□ -1.58
PDLIM5-219ENST00000514743 A0A087WYN8 130 aa5.15□□□□□ -1.58
PDLIM5-219ENST00000514743 PRB2P02812 416 aaPredicted RBP5.15□□□□□ -1.58
PDLIM5-219ENST00000514743 LINC01006Q8NI28 216 aa5.15□□□□□ -1.58
PDLIM5-219ENST00000514743 PSCAO43653 123 aa5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 RNASE1P07998 156 aaKnown RBP5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 GIG44P09565 113 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 LINC01547P58512 204 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 NANOS2P60321 138 aaKnown RBP5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 LINC00308Q8TCZ7 52 aa5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 PRR15LQ9BU68 103 aa5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 ORMDL1Q9P0S3 153 aa5.15□□□□□ -1.59
PDLIM5-219ENST00000514743 FLNBO75369 2602 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-219ENST00000514743 MTORP42345 2549 aa5.14□□□□□ -1.59
PDLIM5-219ENST00000514743 ACANP16112 2415 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 LECT2O14960 151 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 PLA2G2AP14555 144 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 C19orf73Q9NVV2 129 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 BPY2O14599 106 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 WFDC10AQ9H1F0 79 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 SLPIP03973 132 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 REG3AQ06141 175 aa5.13□□□□□ -1.59
PDLIM5-219ENST00000514743 TRBV6-8A0A0A6YYG3 113 aa5.12□□□□□ -1.59
PDLIM5-219ENST00000514743 TRBV10-1A0A0K0K1A3 114 aa5.12□□□□□ -1.59
PDLIM5-219ENST00000514743 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
PDLIM5-219ENST00000514743 Q6ZTI0 123 aa5.12□□□□□ -1.59
PDLIM5-219ENST00000514743 IGLV1-51P01701 117 aa5.12□□□□□ -1.59
PDLIM5-219ENST00000514743 CRPP02741 224 aa5.12□□□□□ -1.59
PDLIM5-219ENST00000514743 CDKN2A-AS1Q9UH64 79 aa5.12□□□□□ -1.59
PDLIM5-219ENST00000514743 HELZ2Q9BYK8 2649 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-219ENST00000514743 OTOGQ6ZRI0 2925 aa5.11□□□□□ -1.59
PDLIM5-219ENST00000514743 C9orf116Q5BN46 136 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-219ENST00000514743 TRGV1A0A0A0MS02 117 aa5.11□□□□□ -1.59
PDLIM5-219ENST00000514743 MOBPQ13875 183 aa5.11□□□□□ -1.59
PDLIM5-219ENST00000514743 CSNK1G2-AS1Q8NCQ2 148 aa5.11□□□□□ -1.59
PDLIM5-219ENST00000514743 VWFP04275 2813 aa5.11□□□□□ -1.59
PDLIM5-219ENST00000514743 GCN1Q92616 2671 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 KRTAP10-3P60369 221 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 COX6A2Q02221 97 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 NTM-AS1Q6ZSK4 140 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 CYP4F30PQ9H0H9 118 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 IGLV5-45A0A087WSX0 123 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 LIMD2Q9BT23 127 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 FN1P02751 2386 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 K7EQD1 137 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 SMR3AQ99954 134 aa5.1□□□□□ -1.59
PDLIM5-219ENST00000514743 LOC100131303A0A0U1RQF7 123 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 H0YGX0 51 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 PRR4Q16378 134 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 RETNLBQ9BQ08 111 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 CELA1Q9UNI1 258 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 J3QKU1 62 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 LCE2BO14633 110 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 SCXQ7RTU7 201 aa5.09□□□□□ -1.59
PDLIM5-219ENST00000514743 IGKV3OR2-268A0A0C4DH90 116 aa5.08□□□□□ -1.6
PDLIM5-219ENST00000514743 RPL36AP83881 106 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-219ENST00000514743 RPL36ALQ969Q0 106 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-219ENST00000514743 NOP10Q9NPE3 64 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-219ENST00000514743 LINC00242Q5T6M2 205 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms