RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 OR13C6PQ8NH95 151 aa10.41□□□□□ -0.74
NUP54-214ENST00000514307 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
NUP54-214ENST00000514307 TSPAN13O95857 204 aa10.4□□□□□ -0.74
NUP54-214ENST00000514307 RPL13AP40429 203 aaKnown RBP10.4□□□□□ -0.74
NUP54-214ENST00000514307 Q6ZRP5 223 aa10.4□□□□□ -0.74
NUP54-214ENST00000514307 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.74
NUP54-214ENST00000514307 STARD9Q9P2P6 4700 aa10.39□□□□□ -0.75
NUP54-214ENST00000514307 A0A087WTM6 91 aa10.39□□□□□ -0.75
NUP54-214ENST00000514307 TRBV10-2A0A0K0K1G8 114 aa10.39□□□□□ -0.75
NUP54-214ENST00000514307 RPL18AQ02543 176 aaKnown RBP10.39□□□□□ -0.75
NUP54-214ENST00000514307 GTF2H5Q6ZYL4 71 aa10.39□□□□□ -0.75
NUP54-214ENST00000514307 TMEM126AQ9H061 195 aa10.39□□□□□ -0.75
NUP54-214ENST00000514307 CBY1Q9Y3M2 126 aa10.39□□□□□ -0.75
NUP54-214ENST00000514307 RYR3Q15413 4870 aa10.39□□□□□ -0.75
NUP54-214ENST00000514307 IGKV2-28A0A075B6P5 120 aa10.38□□□□□ -0.75
NUP54-214ENST00000514307 IGKV2D-28P01615 120 aa10.38□□□□□ -0.75
NUP54-214ENST00000514307 Q8N814 137 aa10.38□□□□□ -0.75
NUP54-214ENST00000514307 TENM2Q9NT68 2774 aa10.37□□□□□ -0.75
NUP54-214ENST00000514307 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
NUP54-214ENST00000514307 GAGE10A6NGK3 116 aa10.37□□□□□ -0.75
NUP54-214ENST00000514307 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
NUP54-214ENST00000514307 S100A7L2Q5SY68 101 aa10.37□□□□□ -0.75
NUP54-214ENST00000514307 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
NUP54-214ENST00000514307 PLA2G2DQ9UNK4 145 aa10.37□□□□□ -0.75
NUP54-214ENST00000514307 CSMD3Q7Z407 3707 aa10.36□□□□□ -0.75
NUP54-214ENST00000514307 NAA38Q9BRA0 125 aaKnown RBP10.36□□□□□ -0.75
NUP54-214ENST00000514307 TRBV20-1A0A075B6N2 111 aa10.35□□□□□ -0.75
NUP54-214ENST00000514307 M0R378 163 aa10.35□□□□□ -0.75
NUP54-214ENST00000514307 PRR3P79522 188 aaKnown RBP10.35□□□□□ -0.75
NUP54-214ENST00000514307 LINC00337Q8N6G1 96 aa10.35□□□□□ -0.75
NUP54-214ENST00000514307 PLECQ15149 4684 aaKnown RBP10.34□□□□□ -0.75
NUP54-214ENST00000514307 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
NUP54-214ENST00000514307 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
NUP54-214ENST00000514307 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
NUP54-214ENST00000514307 C16orf90A8MZG2 172 aa10.33□□□□□ -0.76
NUP54-214ENST00000514307 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
NUP54-214ENST00000514307 NCR3O14931 201 aa10.32□□□□□ -0.76
NUP54-214ENST00000514307 VPREB1P12018 145 aa10.32□□□□□ -0.76
NUP54-214ENST00000514307 UBE2V1Q13404 147 aa10.32□□□□□ -0.76
NUP54-214ENST00000514307 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
NUP54-214ENST00000514307 LCE6AA0A183 80 aa10.31□□□□□ -0.76
NUP54-214ENST00000514307 H0YGX0 51 aa10.31□□□□□ -0.76
NUP54-214ENST00000514307 K7EP34 96 aa10.3□□□□□ -0.76
NUP54-214ENST00000514307 SMIM11BQ8TCY0 68 aa10.3□□□□□ -0.76
NUP54-214ENST00000514307 VPS13DQ5THJ4 4388 aa10.29□□□□□ -0.76
NUP54-214ENST00000514307 IGLV5-37A0A075B6J1 123 aa10.29□□□□□ -0.76
NUP54-214ENST00000514307 TRIAP1O43715 76 aa10.29□□□□□ -0.76
NUP54-214ENST00000514307 SNCGO76070 127 aa10.29□□□□□ -0.76
NUP54-214ENST00000514307 IGLV6-57P01721 117 aa10.29□□□□□ -0.76
NUP54-214ENST00000514307 SDIM1Q6ZPB5 146 aa10.29□□□□□ -0.76
NUP54-214ENST00000514307 DPH3Q96FX2 82 aa10.29□□□□□ -0.76
NUP54-214ENST00000514307 RYR2Q92736 4967 aa10.28□□□□□ -0.76
NUP54-214ENST00000514307 SACSQ9NZJ4 4579 aa10.28□□□□□ -0.76
NUP54-214ENST00000514307 ATXN8Q156A1 80 aa10.27□□□□□ -0.77
NUP54-214ENST00000514307 Q8NDZ9 215 aa10.27□□□□□ -0.77
NUP54-214ENST00000514307 IGLV5-52A0A0A0MRZ9 124 aa10.26□□□□□ -0.77
NUP54-214ENST00000514307 A0A096LNI7 61 aa10.25□□□□□ -0.77
NUP54-214ENST00000514307 IGKV2-24A0A0C4DH68 120 aa10.25□□□□□ -0.77
NUP54-214ENST00000514307 RTL8CO15255 209 aa10.25□□□□□ -0.77
NUP54-214ENST00000514307 TNP2Q05952 138 aa10.25□□□□□ -0.77
NUP54-214ENST00000514307 C22orf24Q9Y442 160 aa10.25□□□□□ -0.77
NUP54-214ENST00000514307 DNAH1Q9P2D7 4330 aa10.25□□□□□ -0.77
NUP54-214ENST00000514307 TRBV10-3A0A0K0K1G6 114 aa10.24□□□□□ -0.77
NUP54-214ENST00000514307 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
NUP54-214ENST00000514307 TCL1BO95988 128 aa10.23□□□□□ -0.77
NUP54-214ENST00000514307 SERTAD4-AS1Q5TG53 156 aa10.23□□□□□ -0.77
NUP54-214ENST00000514307 LYSTQ99698 3801 aa10.22□□□□□ -0.77
NUP54-214ENST00000514307 ALMS1Q8TCU4 4167 aa10.22□□□□□ -0.77
NUP54-214ENST00000514307 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
NUP54-214ENST00000514307 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
NUP54-214ENST00000514307 H3BMG7 143 aa10.22□□□□□ -0.77
NUP54-214ENST00000514307 C7orf33Q8WU49 177 aa10.22□□□□□ -0.77
NUP54-214ENST00000514307 F8W1H4 67 aa10.21□□□□□ -0.77
NUP54-214ENST00000514307 LINC00336Q6ZUF6 198 aa10.21□□□□□ -0.77
NUP54-214ENST00000514307 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
NUP54-214ENST00000514307 MRPL55Q7Z7F7 128 aaKnown RBP10.21□□□□□ -0.77
NUP54-214ENST00000514307 FAM168BA1KXE4 195 aa10.2□□□□□ -0.78
NUP54-214ENST00000514307 C6orf99Q4VX62 202 aa10.2□□□□□ -0.78
NUP54-214ENST00000514307 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
NUP54-214ENST00000514307 LINC00167Q96N53 147 aa10.2□□□□□ -0.78
NUP54-214ENST00000514307 KCNQ1DNQ9H478 68 aa10.2□□□□□ -0.78
NUP54-214ENST00000514307 A0A1B0GX51 115 aa10.19□□□□□ -0.78
NUP54-214ENST00000514307 LST1O00453 97 aa10.19□□□□□ -0.78
NUP54-214ENST00000514307 ZNF73O43830 326 aaPredicted RBP10.19□□□□□ -0.78
NUP54-214ENST00000514307 TRACP01848 142 aa10.19□□□□□ -0.78
NUP54-214ENST00000514307 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
NUP54-214ENST00000514307 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
NUP54-214ENST00000514307 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
NUP54-214ENST00000514307 A0A1W2PNN7 141 aa10.17□□□□□ -0.78
NUP54-214ENST00000514307 M0QXV9 152 aa10.17□□□□□ -0.78
NUP54-214ENST00000514307 SLC25A20O43772 301 aa10.17□□□□□ -0.78
NUP54-214ENST00000514307 PRYO14603 147 aa10.16□□□□□ -0.78
NUP54-214ENST00000514307 COX7BP24311 80 aa10.16□□□□□ -0.78
NUP54-214ENST00000514307 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
NUP54-214ENST00000514307 DNAL4O96015 105 aa10.15□□□□□ -0.78
NUP54-214ENST00000514307 CHTF8P0CG12 524 aa10.15□□□□□ -0.78
NUP54-214ENST00000514307 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
NUP54-214ENST00000514307 C9JAW5 83 aa10.14□□□□□ -0.79
NUP54-214ENST00000514307 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
NUP54-214ENST00000514307 SPACA4Q8TDM5 124 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms